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The map label for this gene is lafT [H]

Identifier: 120597322

GI number: 120597322

Start: 530868

End: 531725

Strand: Direct

Name: lafT [H]

Synonym: Sputw3181_0491

Alternate gene names: 120597322

Gene position: 530868-531725 (Clockwise)

Preceding gene: 120597321

Following gene: 120597323

Centisome position: 11.27

GC content: 40.56

Gene sequence:

>858_bases
ATGAGTAAACTAGTTGGGCTGTTAATTATTTTAGCTTCAGTATTTGGTGGATATGCTTGGGCTGGTGGTGCGTTGGCTGC
ATTATGGCAGCCTGCTGAAATTTTAATCATTATGGGTGCTGGAGTTGGGGCGCTTATTATTGCTAATCCACAATCAGTAC
TAAAAGAAATGCTGGAGCAATTAAAAGAGCTATTTAATAAAGGAAAAGAAGATCCTGAGCTATACCCTCAATTATTTCCT
TTAATGGGCACTTTAATGGCCCAGATCCAATCTCAGGGTTTAAAAGTGCTCGATGAACATTTAGAAAACCCACAACAGAG
CTCAATTTTTTTAATGTATCCAGCGGTGCTAAAGCACCCAAATGTTCTTCAGTTCTTAATCGATAACTTACGCGTACAAT
CTATCGGAAAAATATCTCCCCATGATTTAGAACATATATTAGAAGAGGAGATCCATCGAATAGAAGAGGACAGACTAAGG
CCATCGGAAGCATTTAGCAAAGTGGGTGAAGCCATGCCTGGTTTTGGTATTTTAGCCGCTGTACTCGGTATTATTATCAC
TATGTCAAATATTGACGGGCCAATTACCATGATTGGTGTCAAAGTTGCTGCTGCATTAGTTGGAACATTTATCGGTATTT
TTGCCTGTTATTGTTTTTTCGATCCTATGGCTAAAGCATTGGAGCATTTAGTCGATCGCAAGTCAGCACAGTTACGTTGC
ATTGCCGCTATTTTAGTGACCTTTTCCAAAGGGAAACCCCCTATGATGGCGATTGATGCAGGGCGTAAGCAAATACAAAG
TGAGAATCGTCCCTCGTTTATAGAATTAGAGCGTTGGATGGAGGGGCAGAGAAGCTAA

Upstream 100 bases:

>100_bases
TTAGGGTTAACAGAAACACGTATTTGTCAGTTACATAAATCAGCAATTTCACAGTTAAAAACAATATTGCAGCGCTAAAG
TTAGAAGTGAGAAGATCGTA

Downstream 100 bases:

>100_bases
TGCTCCATAAAAATGAGCCGATTATTATCAAGCGGCGAAAGCGCGGAAAGCGTAATCATGGTCATGGTGGGGCGTGGAAA
GTGGCTTTTGCCGACTTTAC

Product: MotA/TolQ/ExbB proton channel

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 284

Protein sequence:

>285_residues
MSKLVGLLIILASVFGGYAWAGGALAALWQPAEILIIMGAGVGALIIANPQSVLKEMLEQLKELFNKGKEDPELYPQLFP
LMGTLMAQIQSQGLKVLDEHLENPQQSSIFLMYPAVLKHPNVLQFLIDNLRVQSIGKISPHDLEHILEEEIHRIEEDRLR
PSEAFSKVGEAMPGFGILAAVLGIIITMSNIDGPITMIGVKVAAALVGTFIGIFACYCFFDPMAKALEHLVDRKSAQLRC
IAAILVTFSKGKPPMMAIDAGRKQIQSENRPSFIELERWMEGQRS

Sequences:

>Translated_285_residues
MSKLVGLLIILASVFGGYAWAGGALAALWQPAEILIIMGAGVGALIIANPQSVLKEMLEQLKELFNKGKEDPELYPQLFP
LMGTLMAQIQSQGLKVLDEHLENPQQSSIFLMYPAVLKHPNVLQFLIDNLRVQSIGKISPHDLEHILEEEIHRIEEDRLR
PSEAFSKVGEAMPGFGILAAVLGIIITMSNIDGPITMIGVKVAAALVGTFIGIFACYCFFDPMAKALEHLVDRKSAQLRC
IAAILVTFSKGKPPMMAIDAGRKQIQSENRPSFIELERWMEGQRS
>Mature_284_residues
SKLVGLLIILASVFGGYAWAGGALAALWQPAEILIIMGAGVGALIIANPQSVLKEMLEQLKELFNKGKEDPELYPQLFPL
MGTLMAQIQSQGLKVLDEHLENPQQSSIFLMYPAVLKHPNVLQFLIDNLRVQSIGKISPHDLEHILEEEIHRIEEDRLRP
SEAFSKVGEAMPGFGILAAVLGIIITMSNIDGPITMIGVKVAAALVGTFIGIFACYCFFDPMAKALEHLVDRKSAQLRCI
AAILVTFSKGKPPMMAIDAGRKQIQSENRPSFIELERWMEGQRS

Specific function: Required for rotation of the flagellar motor. Probable transmembrane proton channel [H]

COG id: COG1291

COG function: function code N; Flagellar motor component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MotA family [H]

Homologues:

Organism=Escherichia coli, GI1788199, Length=282, Percent_Identity=37.2340425531915, Blast_Score=213, Evalue=2e-56,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000540
- InterPro:   IPR022522
- InterPro:   IPR002898 [H]

Pfam domain/function: PF01618 MotA_ExbB [H]

EC number: NA

Molecular weight: Translated: 31346; Mature: 31215

Theoretical pI: Translated: 5.96; Mature: 5.96

Prosite motif: PS01307 MOTA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKLVGLLIILASVFGGYAWAGGALAALWQPAEILIIMGAGVGALIIANPQSVLKEMLEQ
CHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCEEEEEECCCCEEEEECHHHHHHHHHHH
LKELFNKGKEDPELYPQLFPLMGTLMAQIQSQGLKVLDEHLENPQQSSIFLMYPAVLKHP
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHCCC
NVLQFLIDNLRVQSIGKISPHDLEHILEEEIHRIEEDRLRPSEAFSKVGEAMPGFGILAA
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHH
VLGIIITMSNIDGPITMIGVKVAAALVGTFIGIFACYCFFDPMAKALEHLVDRKSAQLRC
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
IAAILVTFSKGKPPMMAIDAGRKQIQSENRPSFIELERWMEGQRS
HHHHHHHHCCCCCCEEEEHHHHHHHHCCCCCCHHHHHHHHCCCCC
>Mature Secondary Structure 
SKLVGLLIILASVFGGYAWAGGALAALWQPAEILIIMGAGVGALIIANPQSVLKEMLEQ
HHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCEEEEEECCCCEEEEECHHHHHHHHHHH
LKELFNKGKEDPELYPQLFPLMGTLMAQIQSQGLKVLDEHLENPQQSSIFLMYPAVLKHP
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHCCC
NVLQFLIDNLRVQSIGKISPHDLEHILEEEIHRIEEDRLRPSEAFSKVGEAMPGFGILAA
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHH
VLGIIITMSNIDGPITMIGVKVAAALVGTFIGIFACYCFFDPMAKALEHLVDRKSAQLRC
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
IAAILVTFSKGKPPMMAIDAGRKQIQSENRPSFIELERWMEGQRS
HHHHHHHHCCCCCCEEEEHHHHHHHHCCCCCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8501040; 12620739 [H]