Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is 120597318

Identifier: 120597318

GI number: 120597318

Start: 528139

End: 528465

Strand: Direct

Name: 120597318

Synonym: Sputw3181_0487

Alternate gene names: NA

Gene position: 528139-528465 (Clockwise)

Preceding gene: 120597317

Following gene: 120597319

Centisome position: 11.22

GC content: 48.01

Gene sequence:

>327_bases
ATGTCAGAGAAGGGTGGACAAATCTCAATTAAGCAGTGGGCGCGTTTTGGGCATGCTTTACGTCAATATGCCGATGCTCA
GGATTGGACTAACGTCCAAAAAGTGAATATCGCTTTGATTAAAGCACTGCAACAAGCGGGTGAGGCCCGTGATACCGAGC
AGAAGTTAGCCCGTGAGGCGCTAAAACGTGTACATGCCCAAGTACTACAGGAGCTGATTTTGGCGCGTGATGAATTAGCC
GTTGAGATGAGCCGTTTTAGGGAACAACAATCGGGCTTAGCCGCCTATCAATTAACGCAAGTGAGTGGAGCTTTAGATGA
TCTCTGA

Upstream 100 bases:

>100_bases
AGCCTACACCGCCTCTATGACTTTTGTAGCCGTCAGCTTGTCAGTGCCAGTGTTGAAAACAGTGCTGAAGCCTTGGTTCC
TATTACTCAGGTGATTACGA

Downstream 100 bases:

>100_bases
TCTTCTTTCAACTCGTCATATGGGAACAAATCCTAATGTGACGACTAAAGTGACAAGTGCAGTGGATCAAGATAAAGCGG
AATCCTTTACGTTGTTGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 108; Mature: 107

Protein sequence:

>108_residues
MSEKGGQISIKQWARFGHALRQYADAQDWTNVQKVNIALIKALQQAGEARDTEQKLAREALKRVHAQVLQELILARDELA
VEMSRFREQQSGLAAYQLTQVSGALDDL

Sequences:

>Translated_108_residues
MSEKGGQISIKQWARFGHALRQYADAQDWTNVQKVNIALIKALQQAGEARDTEQKLAREALKRVHAQVLQELILARDELA
VEMSRFREQQSGLAAYQLTQVSGALDDL
>Mature_107_residues
SEKGGQISIKQWARFGHALRQYADAQDWTNVQKVNIALIKALQQAGEARDTEQKLAREALKRVHAQVLQELILARDELAV
EMSRFREQQSGLAAYQLTQVSGALDDL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12162; Mature: 12031

Theoretical pI: Translated: 7.69; Mature: 7.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEKGGQISIKQWARFGHALRQYADAQDWTNVQKVNIALIKALQQAGEARDTEQKLAREA
CCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
LKRVHAQVLQELILARDELAVEMSRFREQQSGLAAYQLTQVSGALDDL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SEKGGQISIKQWARFGHALRQYADAQDWTNVQKVNIALIKALQQAGEARDTEQKLAREA
CCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
LKRVHAQVLQELILARDELAVEMSRFREQQSGLAAYQLTQVSGALDDL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA