Click here to switch to the map view.

The map label for this gene is fliS [H]

Identifier: 120597317

GI number: 120597317

Start: 527790

End: 528170

Strand: Direct

Name: fliS [H]

Synonym: Sputw3181_0486

Alternate gene names: 120597317

Gene position: 527790-528170 (Clockwise)

Preceding gene: 120597316

Following gene: 120597318

Centisome position: 11.21

GC content: 44.62

Gene sequence:

>381_bases
ATGTTAAATGAGTACGATCCATTTAATGCCTACAAGCAAACCGCTTTAGATGCACAAGTTGCTGCTGCAACGCCCCATGA
TATGGTGCGTATGTTGCTTGATGGGTTATTGGAAGAGCTAGAGCGTGCTGCAGGCCATATGGAATATCAACGGTTTGAAG
CTAAAGGCATGAGTATTCATAAATGCCTCAATATCGTTCATGGATTGGACTCAATGCTCGATCTTGAGAACGGTGGTGAG
GTTGCTATCAGCCTACACCGCCTCTATGACTTTTGTAGCCGTCAGCTTGTCAGTGCCAGTGTTGAAAACAGTGCTGAAGC
CTTGGTTCCTATTACTCAGGTGATTACGAATGTCAGAGAAGGGTGGACAAATCTCAATTAA

Upstream 100 bases:

>100_bases
CAAAAATACCAAATTTATTTGGCTCAGTTTACGGCGATGGAATCTACCATTAACCAATTTAATTCTGCTAGTCAGTTGTT
TTCATAGGAAGTTGTTATAA

Downstream 100 bases:

>100_bases
GCAGTGGGCGCGTTTTGGGCATGCTTTACGTCAATATGCCGATGCTCAGGATTGGACTAACGTCCAAAAAGTGAATATCG
CTTTGATTAAAGCACTGCAA

Product: flagellar protein FliS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 126; Mature: 126

Protein sequence:

>126_residues
MLNEYDPFNAYKQTALDAQVAAATPHDMVRMLLDGLLEELERAAGHMEYQRFEAKGMSIHKCLNIVHGLDSMLDLENGGE
VAISLHRLYDFCSRQLVSASVENSAEALVPITQVITNVREGWTNLN

Sequences:

>Translated_126_residues
MLNEYDPFNAYKQTALDAQVAAATPHDMVRMLLDGLLEELERAAGHMEYQRFEAKGMSIHKCLNIVHGLDSMLDLENGGE
VAISLHRLYDFCSRQLVSASVENSAEALVPITQVITNVREGWTNLN
>Mature_126_residues
MLNEYDPFNAYKQTALDAQVAAATPHDMVRMLLDGLLEELERAAGHMEYQRFEAKGMSIHKCLNIVHGLDSMLDLENGGE
VAISLHRLYDFCSRQLVSASVENSAEALVPITQVITNVREGWTNLN

Specific function: Not Known. [C]

COG id: COG1516

COG function: function code NUO; Flagellin-specific chaperone FliS

Gene ontology:

Cell location: Cytoplasm, cytosol (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliS family [H]

Homologues:

Organism=Escherichia coli, GI1788234, Length=114, Percent_Identity=32.4561403508772, Blast_Score=68, Evalue=2e-13,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003713 [H]

Pfam domain/function: PF02561 FliS [H]

EC number: NA

Molecular weight: Translated: 14077; Mature: 14077

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNEYDPFNAYKQTALDAQVAAATPHDMVRMLLDGLLEELERAAGHMEYQRFEAKGMSIH
CCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
KCLNIVHGLDSMLDLENGGEVAISLHRLYDFCSRQLVSASVENSAEALVPITQVITNVRE
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
GWTNLN
HCCCCC
>Mature Secondary Structure
MLNEYDPFNAYKQTALDAQVAAATPHDMVRMLLDGLLEELERAAGHMEYQRFEAKGMSIH
CCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
KCLNIVHGLDSMLDLENGGEVAISLHRLYDFCSRQLVSASVENSAEALVPITQVITNVRE
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
GWTNLN
HCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1527488; 11677609 [H]