Click here to switch to the map view.

The map label for this gene is flgK [H]

Identifier: 119947171

GI number: 119947171

Start: 4387356

End: 4388720

Strand: Reverse

Name: flgK [H]

Synonym: Ping_3569

Alternate gene names: 119947171

Gene position: 4388720-4387356 (Counterclockwise)

Preceding gene: 119947172

Following gene: 119947170

Centisome position: 96.25

GC content: 42.34

Gene sequence:

>1365_bases
ATGAGTATATATAATATTGCCCTATCAGGGGTAAGCGCAAACCGTACAGCTTTAAATATAACGGCTCAAAATATAGCAAA
TGCAAATACTGCGGGTCATTCTCGTCAGCAGGCAGTACAAAGCAGTATTACTCGCTCTAATGATGTCGGGGCTGGTGTGG
AGGTTTCAAGTATCCGCCGTATGGCAGATCAATTTATTATTTCTCAGCTGCGCAGCAGCAATACCGAACTGGGTAACAGT
AGCTACAGTGCGTCAAGCCTTGGCCAGCTGGAACAGATTGTCGGGTTGGACGGATTTAATCTTTCAGCTGGAATGGATCA
GTTTTTTAGCAGTATCAGTGAAGCGAGTGTTGCGCCGGAATCCGTCGAGTTTCGTCAGCAGGTTTTATCTGATGCACAGG
CACTTGCTCAGCGTTTTAAAGGGTTGAGCCAGACACTGAGCAATCAGAATGCGCAGTTAGCGAGCGACAGAGAAAATAAC
CTTTCTATGGTCAATGGACTGCTTGATAACCTTGCTCAAAGCAGCAAAGCTATTATGGAAGTTTATAATGTTGGCGGAAA
TACTGCAACGCTTGAAGATAACCGCGATCAGATGCTAAATGAATTATCACAGCTGATAAAGGTTAATGTAAATAAAGAAG
AAAATGGTGAATTGCAACTATCAACGAACAATGGTCAACCACTGCTTATTAATGATAAAGCGGCAGAGTTTACAACGACT
CCATTACCTTCTGATCCTTATCAGGCGATTATCAATGCTACTTTCAACGGTTCTACTTTCAATGTCTCGAGCGATCTCGG
TGGGGAGTTGGGAGCAATCGACAAGACACAGAAAAAAGATCTGGCAGCGCTGCACAATACGATTAACGAGATGGCTGTTA
TTGTTGCCGATGAGGTTAATAAAAGCTTAGCGAGTGGTACCGATCTTAACGGACTTTCACCCGGTCTGGCTCTTTTTTCC
TACGATCCTGCTAATCCGGCAGGCAGTATGCAAATGAACTTATTGTCGACGGATGAATTAGCGTTTTCAGGTGATGGTAA
TCCAGGTGATGGTCAAATACTGGCAAATCTGCTTGATATTTCAAAAACTGATTTTTCTATCACAGGGGCGGGTAATATTA
ATCTTTCGGAAGCTTTTAGTTTAAGCGTTGGCAAGATTGCCATTGACAGCCGGCAAGCACAGCAAAATTTAGATTCTAAT
ACCGCCTTGTTTAATCAGGTGCAGGCATCAAGAGAAAATCTAAGTGGGGTTAACAGTGATGAAGAAGCTGCTAATTTAAT
GATCTATGCCAATGCTTATGAAGCAAATATGAAAGTTATCAGCACTGCAAATCAGATGTTTAATAGTATTCTTCGCGCTT
TTTAA

Upstream 100 bases:

>100_bases
TATCCAGTGCCGGCACCACAGCAGTTAACCATTTTGCACTTAACAATGAGATTGCTTTTAACCAGTTGAATAATAAAGAT
TAAGAGCGCAGGGGATAGTC

Downstream 100 bases:

>100_bases
CTGAGAATTTTAATATGCGAGTATCAGATTCATACTGTACCAATAACATGCTAATCGAATGATTATCAGTATTATTACTG
CGGTTTAACTTGGAGTTTTA

Product: flagellar hook-associated protein FlgK

Products: NA

Alternate protein names: HAP1 [H]

Number of amino acids: Translated: 454; Mature: 453

Protein sequence:

>454_residues
MSIYNIALSGVSANRTALNITAQNIANANTAGHSRQQAVQSSITRSNDVGAGVEVSSIRRMADQFIISQLRSSNTELGNS
SYSASSLGQLEQIVGLDGFNLSAGMDQFFSSISEASVAPESVEFRQQVLSDAQALAQRFKGLSQTLSNQNAQLASDRENN
LSMVNGLLDNLAQSSKAIMEVYNVGGNTATLEDNRDQMLNELSQLIKVNVNKEENGELQLSTNNGQPLLINDKAAEFTTT
PLPSDPYQAIINATFNGSTFNVSSDLGGELGAIDKTQKKDLAALHNTINEMAVIVADEVNKSLASGTDLNGLSPGLALFS
YDPANPAGSMQMNLLSTDELAFSGDGNPGDGQILANLLDISKTDFSITGAGNINLSEAFSLSVGKIAIDSRQAQQNLDSN
TALFNQVQASRENLSGVNSDEEAANLMIYANAYEANMKVISTANQMFNSILRAF

Sequences:

>Translated_454_residues
MSIYNIALSGVSANRTALNITAQNIANANTAGHSRQQAVQSSITRSNDVGAGVEVSSIRRMADQFIISQLRSSNTELGNS
SYSASSLGQLEQIVGLDGFNLSAGMDQFFSSISEASVAPESVEFRQQVLSDAQALAQRFKGLSQTLSNQNAQLASDRENN
LSMVNGLLDNLAQSSKAIMEVYNVGGNTATLEDNRDQMLNELSQLIKVNVNKEENGELQLSTNNGQPLLINDKAAEFTTT
PLPSDPYQAIINATFNGSTFNVSSDLGGELGAIDKTQKKDLAALHNTINEMAVIVADEVNKSLASGTDLNGLSPGLALFS
YDPANPAGSMQMNLLSTDELAFSGDGNPGDGQILANLLDISKTDFSITGAGNINLSEAFSLSVGKIAIDSRQAQQNLDSN
TALFNQVQASRENLSGVNSDEEAANLMIYANAYEANMKVISTANQMFNSILRAF
>Mature_453_residues
SIYNIALSGVSANRTALNITAQNIANANTAGHSRQQAVQSSITRSNDVGAGVEVSSIRRMADQFIISQLRSSNTELGNSS
YSASSLGQLEQIVGLDGFNLSAGMDQFFSSISEASVAPESVEFRQQVLSDAQALAQRFKGLSQTLSNQNAQLASDRENNL
SMVNGLLDNLAQSSKAIMEVYNVGGNTATLEDNRDQMLNELSQLIKVNVNKEENGELQLSTNNGQPLLINDKAAEFTTTP
LPSDPYQAIINATFNGSTFNVSSDLGGELGAIDKTQKKDLAALHNTINEMAVIVADEVNKSLASGTDLNGLSPGLALFSY
DPANPAGSMQMNLLSTDELAFSGDGNPGDGQILANLLDISKTDFSITGAGNINLSEAFSLSVGKIAIDSRQAQQNLDSNT
ALFNQVQASRENLSGVNSDEEAANLMIYANAYEANMKVISTANQMFNSILRAF

Specific function: Unknown

COG id: COG1256

COG function: function code N; Flagellar hook-associated protein

Gene ontology:

Cell location: Secreted. Bacterial flagellum (By similarity) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787323, Length=320, Percent_Identity=27.1875, Blast_Score=115, Evalue=8e-27,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR002371 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 48221; Mature: 48090

Theoretical pI: Translated: 4.11; Mature: 4.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIYNIALSGVSANRTALNITAQNIANANTAGHSRQQAVQSSITRSNDVGAGVEVSSIRR
CCEEEEEEECCCCCCEEEEEEHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHH
MADQFIISQLRSSNTELGNSSYSASSLGQLEQIVGLDGFNLSAGMDQFFSSISEASVAPE
HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCH
SVEFRQQVLSDAQALAQRFKGLSQTLSNQNAQLASDRENNLSMVNGLLDNLAQSSKAIME
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHH
VYNVGGNTATLEDNRDQMLNELSQLIKVNVNKEENGELQLSTNNGQPLLINDKAAEFTTT
HHHCCCCEEEECCCHHHHHHHHHHHHEECCCCCCCCEEEEECCCCCEEEECCCCCCCCCC
PLPSDPYQAIINATFNGSTFNVSSDLGGELGAIDKTQKKDLAALHNTINEMAVIVADEVN
CCCCCHHHHHEEEEECCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEHHHHH
KSLASGTDLNGLSPGLALFSYDPANPAGSMQMNLLSTDELAFSGDGNPGDGQILANLLDI
HHHHCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEECCCEEECCCCCCCCHHHHHHHHHC
SKTDFSITGAGNINLSEAFSLSVGKIAIDSRQAQQNLDSNTALFNQVQASRENLSGVNSD
CCCCEEEECCCCCCHHHHHCCCCCEEEECCHHHHHCCCCHHHHHHHHHHHHHHCCCCCCC
EEAANLMIYANAYEANMKVISTANQMFNSILRAF
CCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
SIYNIALSGVSANRTALNITAQNIANANTAGHSRQQAVQSSITRSNDVGAGVEVSSIRR
CEEEEEEECCCCCCEEEEEEHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHH
MADQFIISQLRSSNTELGNSSYSASSLGQLEQIVGLDGFNLSAGMDQFFSSISEASVAPE
HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCH
SVEFRQQVLSDAQALAQRFKGLSQTLSNQNAQLASDRENNLSMVNGLLDNLAQSSKAIME
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHH
VYNVGGNTATLEDNRDQMLNELSQLIKVNVNKEENGELQLSTNNGQPLLINDKAAEFTTT
HHHCCCCEEEECCCHHHHHHHHHHHHEECCCCCCCCEEEEECCCCCEEEECCCCCCCCCC
PLPSDPYQAIINATFNGSTFNVSSDLGGELGAIDKTQKKDLAALHNTINEMAVIVADEVN
CCCCCHHHHHEEEEECCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEHHHHH
KSLASGTDLNGLSPGLALFSYDPANPAGSMQMNLLSTDELAFSGDGNPGDGQILANLLDI
HHHHCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEECCCEEECCCCCCCCHHHHHHHHHC
SKTDFSITGAGNINLSEAFSLSVGKIAIDSRQAQQNLDSNTALFNQVQASRENLSGVNSD
CCCCEEEECCCCCCHHHHHCCCCCEEEECCHHHHHCCCCHHHHHHHHHHHHHHCCCCCCC
EEAANLMIYANAYEANMKVISTANQMFNSILRAF
CCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 8158647 [H]