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The map label for this gene is ywkD [H]

Identifier: 119947134

GI number: 119947134

Start: 4350813

End: 4351196

Strand: Reverse

Name: ywkD [H]

Synonym: Ping_3532

Alternate gene names: 119947134

Gene position: 4351196-4350813 (Counterclockwise)

Preceding gene: 119947135

Following gene: 119947131

Centisome position: 95.43

GC content: 39.58

Gene sequence:

>384_bases
ATGTTACAAGGAACACATCATACGGCGATTATCTGCTCTGATTATGAAAAATCGAAATATTTCTATACTGCTGTTCTTGG
ATTAAAGATTATTGATGAGAATTACAGAGAAGAGCGTGATTCTTATAAGCTTGATTTGCAGTTACCCGACGGCACTCAGG
TGGAGTTATTTTCTTTTCCGGATTTTGCACCCAGAGCGAGTCACCCTGAAGCGTTAGGATTAAGACATCTTGCCTTTGTG
GTCGAATCAATGGATCTGACTTGTAAGCATTTGCAGTCCTTTGCTGTTGCTGTGGAGCCTGTCCGTATTGACCCCTATAC
CAATAAAAAATATACCTTCTTTAGCGATCCCGATAATCTACCTTTAGAAATATGCGAGTTATAA

Upstream 100 bases:

>100_bases
ATCAAGCCCGCGGTTTTAGACTCTATCCCCAAACTACTTGAAGCTGCCTCTAGGTGATTTGGGTATTAGTCAATATATTG
GAAAAACAGAGGAATAAAAA

Downstream 100 bases:

>100_bases
ACCAGGGCCCGAATTACAATAAGGGCTCCTCAATAATACCAAAAGAACTAAAAAGATAATCAGCCTTGCTGGTTAAAATC
ATCCCTAACTGCGTTGTGGG

Product: glyoxalase/bleomycin resistance protein/dioxygenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MLQGTHHTAIICSDYEKSKYFYTAVLGLKIIDENYREERDSYKLDLQLPDGTQVELFSFPDFAPRASHPEALGLRHLAFV
VESMDLTCKHLQSFAVAVEPVRIDPYTNKKYTFFSDPDNLPLEICEL

Sequences:

>Translated_127_residues
MLQGTHHTAIICSDYEKSKYFYTAVLGLKIIDENYREERDSYKLDLQLPDGTQVELFSFPDFAPRASHPEALGLRHLAFV
VESMDLTCKHLQSFAVAVEPVRIDPYTNKKYTFFSDPDNLPLEICEL
>Mature_127_residues
MLQGTHHTAIICSDYEKSKYFYTAVLGLKIIDENYREERDSYKLDLQLPDGTQVELFSFPDFAPRASHPEALGLRHLAFV
VESMDLTCKHLQSFAVAVEPVRIDPYTNKKYTFFSDPDNLPLEICEL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081697, Length=125, Percent_Identity=53.6, Blast_Score=133, Evalue=4e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004360 [H]

Pfam domain/function: PF00903 Glyoxalase [H]

EC number: NA

Molecular weight: Translated: 14619; Mature: 14619

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQGTHHTAIICSDYEKSKYFYTAVLGLKIIDENYREERDSYKLDLQLPDGTQVELFSFP
CCCCCCEEEEEECCCCCCCEEEEEEEEEEEECCCHHCCCCCEEEEEECCCCCEEEEEECC
DFAPRASHPEALGLRHLAFVVESMDLTCKHLQSFAVAVEPVRIDPYTNKKYTFFSDPDNL
CCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHEEEEEEEECCCCCCEEEEECCCCCC
PLEICEL
CEEEECC
>Mature Secondary Structure
MLQGTHHTAIICSDYEKSKYFYTAVLGLKIIDENYREERDSYKLDLQLPDGTQVELFSFP
CCCCCCEEEEEECCCCCCCEEEEEEEEEEEECCCHHCCCCCEEEEEECCCCCEEEEEECC
DFAPRASHPEALGLRHLAFVVESMDLTCKHLQSFAVAVEPVRIDPYTNKKYTFFSDPDNL
CCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHEEEEEEEECCCCCCEEEEECCCCCC
PLEICEL
CEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]