Definition | Psychromonas ingrahamii 37, complete genome. |
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Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is 119947027
Identifier: 119947027
GI number: 119947027
Start: 4230464
End: 4231396
Strand: Reverse
Name: 119947027
Synonym: Ping_3424
Alternate gene names: NA
Gene position: 4231396-4230464 (Counterclockwise)
Preceding gene: 119947028
Following gene: 119947018
Centisome position: 92.8
GC content: 35.91
Gene sequence:
>933_bases ATGTCGGATAATAAAAAATATCGTTTAGTTACTCGTAGTGATTTTGATGGTTTAGTGTGTGCTATTTTACTCAAAAATAT TAATTTAGTTGACGACATTCTTTTTGTTCACCCTAAAGATATGCAAGACGGAATTATTGAAGTAGGGCCAGATGATATTT CGACCAACTTACCTTATGTTGACGGTATTCATCTTTCCTTTGATCACCATCATAGTGAAACACTGCGTAATGAAAAACGA GATAATCATATTATCGATCCTGATGCTCCTTCAGCTGCTCGCGTTGTTTACGATTATTACGGCGGAGAAAAAACCTTCCC CGCTAGCTGGAAAAGTATGATGAATGCAGTAGATAAAGCTGACTCTGCTCAATTCAATAAAGAAGAAGTGTTACATGCTA AACGCTGGGAACTGCTTAATTTCATTATGGATTCTCGAACAGGTTTAGGTCGCTTCAGAAATTTTCGTATCTCAAATTAC GAACTCATGATGGCTCTAATTGAATTTGGGAAAGATCACAGCATTGACCAGATACTAGAACTTCCTGATGTTAAAGAACG AACCGATCTTTACTTTGAGCACGAAGAAAAATTTAAAGAGCAGATTAAACGTTGTGCTACGGTTCATGGTAACTTAGTTA TTCTTGATTTAAGAGAAGAAGAAATTATCTACTCAGGTAATCGTTTTGTTATTTATGCATTATTTCCACAATGTAATATT TCAATTCATATTATGTGGGGCCTTAAAAAGCAAAATACAGTTTTTGCTACCGGTAAATCTATTTTTGACCGTAGTTCAAA AACCAATGTTGGCGAGTTAATGCTTAAATACAATGGTGGCGGACATAATGCAGCGGGGACTTGTCAAGTTCCACATGATC AAAGTGAAGCTGGTCTTGCAGAACTAATTTCAGCTATTAATGCAGATGGTTAA
Upstream 100 bases:
>100_bases GTATGGGTGTCCAATTTATCTTCAATTTATCTGTTAGTATGTTTTAATAAAGAGCGAATGTTTAATAATAAAAATAAATT ATATCTAATGGAGATAATAG
Downstream 100 bases:
>100_bases TCGTTTCAACACTAAACGATAAATCATCGTAAAACTCCTTCGATTAAAGCTATGTTACTTTTTCTCGAAGGAGACATTTA TATTCATAATGACAGCCCAA
Product: exopolyphosphatase-related protein
Products: NA
Alternate protein names: Exopolyphosphatase-Like Protein; Exopolyphosphatase
Number of amino acids: Translated: 310; Mature: 309
Protein sequence:
>310_residues MSDNKKYRLVTRSDFDGLVCAILLKNINLVDDILFVHPKDMQDGIIEVGPDDISTNLPYVDGIHLSFDHHHSETLRNEKR DNHIIDPDAPSAARVVYDYYGGEKTFPASWKSMMNAVDKADSAQFNKEEVLHAKRWELLNFIMDSRTGLGRFRNFRISNY ELMMALIEFGKDHSIDQILELPDVKERTDLYFEHEEKFKEQIKRCATVHGNLVILDLREEEIIYSGNRFVIYALFPQCNI SIHIMWGLKKQNTVFATGKSIFDRSSKTNVGELMLKYNGGGHNAAGTCQVPHDQSEAGLAELISAINADG
Sequences:
>Translated_310_residues MSDNKKYRLVTRSDFDGLVCAILLKNINLVDDILFVHPKDMQDGIIEVGPDDISTNLPYVDGIHLSFDHHHSETLRNEKR DNHIIDPDAPSAARVVYDYYGGEKTFPASWKSMMNAVDKADSAQFNKEEVLHAKRWELLNFIMDSRTGLGRFRNFRISNY ELMMALIEFGKDHSIDQILELPDVKERTDLYFEHEEKFKEQIKRCATVHGNLVILDLREEEIIYSGNRFVIYALFPQCNI SIHIMWGLKKQNTVFATGKSIFDRSSKTNVGELMLKYNGGGHNAAGTCQVPHDQSEAGLAELISAINADG >Mature_309_residues SDNKKYRLVTRSDFDGLVCAILLKNINLVDDILFVHPKDMQDGIIEVGPDDISTNLPYVDGIHLSFDHHHSETLRNEKRD NHIIDPDAPSAARVVYDYYGGEKTFPASWKSMMNAVDKADSAQFNKEEVLHAKRWELLNFIMDSRTGLGRFRNFRISNYE LMMALIEFGKDHSIDQILELPDVKERTDLYFEHEEKFKEQIKRCATVHGNLVILDLREEEIIYSGNRFVIYALFPQCNIS IHIMWGLKKQNTVFATGKSIFDRSSKTNVGELMLKYNGGGHNAAGTCQVPHDQSEAGLAELISAINADG
Specific function: Unknown
COG id: COG0618
COG function: function code R; Exopolyphosphatase-related proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35297; Mature: 35166
Theoretical pI: Translated: 5.72; Mature: 5.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDNKKYRLVTRSDFDGLVCAILLKNINLVDDILFVHPKDMQDGIIEVGPDDISTNLPYV CCCCCEEEEEEECCCCHHHHHHHHHCCCHHHHEEEECCCCCCCCEEEECCCCCCCCCCCC DGIHLSFDHHHSETLRNEKRDNHIIDPDAPSAARVVYDYYGGEKTFPASWKSMMNAVDKA CEEEEEECCCHHHHHHHHCCCCCCCCCCCCCHHEEEEEECCCCCCCCHHHHHHHHHHHCC DSAQFNKEEVLHAKRWELLNFIMDSRTGLGRFRNFRISNYELMMALIEFGKDHSIDQILE CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHCEECCCHHHHHHHHHHCCCCCHHHHHC LPDVKERTDLYFEHEEKFKEQIKRCATVHGNLVILDLREEEIIYSGNRFVIYALFPQCNI CCCCCCHHHHEEHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEECCEEEEEEECCCCCE SIHIMWGLKKQNTVFATGKSIFDRSSKTNVGELMLKYNGGGHNAAGTCQVPHDQSEAGLA EEEEEECCCCCCEEEECCHHHHCCCCCCCCEEEEEEECCCCCCCCCEEECCCCCCHHHHH ELISAINADG HHHHHHCCCC >Mature Secondary Structure SDNKKYRLVTRSDFDGLVCAILLKNINLVDDILFVHPKDMQDGIIEVGPDDISTNLPYV CCCCEEEEEEECCCCHHHHHHHHHCCCHHHHEEEECCCCCCCCEEEECCCCCCCCCCCC DGIHLSFDHHHSETLRNEKRDNHIIDPDAPSAARVVYDYYGGEKTFPASWKSMMNAVDKA CEEEEEECCCHHHHHHHHCCCCCCCCCCCCCHHEEEEEECCCCCCCCHHHHHHHHHHHCC DSAQFNKEEVLHAKRWELLNFIMDSRTGLGRFRNFRISNYELMMALIEFGKDHSIDQILE CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHCEECCCHHHHHHHHHHCCCCCHHHHHC LPDVKERTDLYFEHEEKFKEQIKRCATVHGNLVILDLREEEIIYSGNRFVIYALFPQCNI CCCCCCHHHHEEHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEECCEEEEEEECCCCCE SIHIMWGLKKQNTVFATGKSIFDRSSKTNVGELMLKYNGGGHNAAGTCQVPHDQSEAGLA EEEEEECCCCCCEEEECCHHHHCCCCCCCCEEEEEEECCCCCCCCCEEECCCCCCHHHHH ELISAINADG HHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA