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The map label for this gene is recA [H]

Identifier: 119946986

GI number: 119946986

Start: 4176925

End: 4178001

Strand: Reverse

Name: recA [H]

Synonym: Ping_3381

Alternate gene names: 119946986

Gene position: 4178001-4176925 (Counterclockwise)

Preceding gene: 119946987

Following gene: 119946985

Centisome position: 91.63

GC content: 42.06

Gene sequence:

>1077_bases
ATGAGTCAGGATAAAAACAAAGATAAAGCATTAGCCGCAGCCCTTGGACAAATTGAAAAACAATTTGGTAAAGGTTCAAT
CATGCGTTTAGGTGATGATGCAGCATCGATGGAAATTGATTCTGTTTCAACTGGCTCATTAAGTTTGGATGTTGCGTTGG
GTATAGGTGGCTTGCCCTACGGCCGTTGTGTTGAAGTTTATGGTCCGGAGAGTTCGGGTAAGACAACCCTAACCTTACAA
GTTATTGCCGAAGCGCAAAAACAAGGTAAAACCTGTGCATTTATTGATGCCGAACATGCACTTGATCCGACTTATGCCAA
AAAACTCGGCGTGGATGTTGACAACCTGCTTATCTCTCAGCCGGATACCGGTGAGCAAGCATTAGAAATCTGTGACATGC
TGGTGCGCTCTGGTGCAGTAGGTGTGGTGGTGGTAGATTCCGTTGCCGCGTTAACACCTAAAGCTGAGATTGAAGGCGAT
ATGGGTGATTCACACATGGGTCTGCAAGCACGTTTAATGTCGCAAGCATTACGTAAATTAACCGGGAACATCAAACAGAC
CAATACTATGGTTATTTTCATTAACCAAATCCGCATGAAGATCGGTGTTATGTTTGGCAATCCCGAAACGACTACGGGTG
GTAATGCGCTTAAGTTCTATGCTTCTGTTCGTTTAGATATCCGCCGTATTGGCGCGATTAAAAACGGTGAAGAAATTATT
GGTAATGAAACACGCGTAAAAGTGGTTAAAAATAAAGTCGCGCCACCTTTTAAGCAAGCAGAGTTTCAGATTCTATATGG
TAAAGGTATTAACCATTTCGGTGAGTTGGTTGACTTAGGTGTTAAACAAGAGTTTGTTGAAAAAGCGGGTTCTTGGTACT
CGTACAATGGTGCTAAAATTGGTCAAGGTAAGAGCAATGCAAGCCAGTATTTAAAAGATAACCCGGCATCAGCCGAAGAG
CTTGAAGCTAAAATTCGCGAAGCGTTAATGCCGAAAGCAGAAGTCATTGAAGATAAAAAAATAATTGCAGAGAAAAAAGT
AACTGAAGATAAAAAAGTAACTGCCTCAGAGGGTTAA

Upstream 100 bases:

>100_bases
AAAGCACTTGATACTGTGTAAATCAACAGTATACTTAGTCCCAAATACTGAGTGCATATACAGTTAAATAAAAGCATGAT
CACACAAATCTGGAGATAAA

Downstream 100 bases:

>100_bases
TTAGCTCAATTAAATTTGTATGGCTGTGCTACAGACTATGCAACAGGGCAAACAAAAAGGCGTGATATTTCACGCTTTTT
TTGTTTGCCAGATGACAGTT

Product: recombination protein RecA

Products: NA

Alternate protein names: Recombinase A [H]

Number of amino acids: Translated: 358; Mature: 357

Protein sequence:

>358_residues
MSQDKNKDKALAAALGQIEKQFGKGSIMRLGDDAASMEIDSVSTGSLSLDVALGIGGLPYGRCVEVYGPESSGKTTLTLQ
VIAEAQKQGKTCAFIDAEHALDPTYAKKLGVDVDNLLISQPDTGEQALEICDMLVRSGAVGVVVVDSVAALTPKAEIEGD
MGDSHMGLQARLMSQALRKLTGNIKQTNTMVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAIKNGEEII
GNETRVKVVKNKVAPPFKQAEFQILYGKGINHFGELVDLGVKQEFVEKAGSWYSYNGAKIGQGKSNASQYLKDNPASAEE
LEAKIREALMPKAEVIEDKKIIAEKKVTEDKKVTASEG

Sequences:

>Translated_358_residues
MSQDKNKDKALAAALGQIEKQFGKGSIMRLGDDAASMEIDSVSTGSLSLDVALGIGGLPYGRCVEVYGPESSGKTTLTLQ
VIAEAQKQGKTCAFIDAEHALDPTYAKKLGVDVDNLLISQPDTGEQALEICDMLVRSGAVGVVVVDSVAALTPKAEIEGD
MGDSHMGLQARLMSQALRKLTGNIKQTNTMVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAIKNGEEII
GNETRVKVVKNKVAPPFKQAEFQILYGKGINHFGELVDLGVKQEFVEKAGSWYSYNGAKIGQGKSNASQYLKDNPASAEE
LEAKIREALMPKAEVIEDKKIIAEKKVTEDKKVTASEG
>Mature_357_residues
SQDKNKDKALAAALGQIEKQFGKGSIMRLGDDAASMEIDSVSTGSLSLDVALGIGGLPYGRCVEVYGPESSGKTTLTLQV
IAEAQKQGKTCAFIDAEHALDPTYAKKLGVDVDNLLISQPDTGEQALEICDMLVRSGAVGVVVVDSVAALTPKAEIEGDM
GDSHMGLQARLMSQALRKLTGNIKQTNTMVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAIKNGEEIIG
NETRVKVVKNKVAPPFKQAEFQILYGKGINHFGELVDLGVKQEFVEKAGSWYSYNGAKIGQGKSNASQYLKDNPASAEEL
EAKIREALMPKAEVIEDKKIIAEKKVTEDKKVTASEG

Specific function: Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with lexA causing its activation

COG id: COG0468

COG function: function code L; RecA/RadA recombinase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recA family [H]

Homologues:

Organism=Escherichia coli, GI1789051, Length=330, Percent_Identity=79.3939393939394, Blast_Score=557, Evalue=1e-160,

Paralogues:

None

Copy number: 1548 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800-1200 (L-broth) 40,000-60,000 (L-broth + Nalidixate) 4,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR013765
- InterPro:   IPR020584
- InterPro:   IPR020588
- InterPro:   IPR020587 [H]

Pfam domain/function: PF00154 RecA [H]

EC number: NA

Molecular weight: Translated: 38486; Mature: 38354

Theoretical pI: Translated: 6.33; Mature: 6.33

Prosite motif: PS00321 RECA_1 ; PS50162 RECA_2 ; PS50163 RECA_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQDKNKDKALAAALGQIEKQFGKGSIMRLGDDAASMEIDSVSTGSLSLDVALGIGGLPY
CCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEECCCCCCCEEEEEEECCCCCCC
GRCVEVYGPESSGKTTLTLQVIAEAQKQGKTCAFIDAEHALDPTYAKKLGVDVDNLLISQ
CCEEEEECCCCCCCEEEEEHHHHHHHHCCCEEEEEEHHHCCCHHHHHHHCCCHHHHEECC
PDTGEQALEICDMLVRSGAVGVVVVDSVAALTPKAEIEGDMGDSHMGLQARLMSQALRKL
CCCHHHHHHHHHHHHHCCCCEEEEECHHHHCCCCHHCCCCCCCCCCHHHHHHHHHHHHHH
TGNIKQTNTMVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAIKNGEEII
HCCCEECCEEEEEEEEEEEEEEEEECCCCCCCCCCEEEEEEEHHHHHHHHCCCCCCHHHH
GNETRVKVVKNKVAPPFKQAEFQILYGKGINHFGELVDLGVKQEFVEKAGSWYSYNGAKI
CCCCEEEEEHHCCCCCCCCCCEEEEECCCCHHHHHHHHCCHHHHHHHHCCCEEECCCCCC
GQGKSNASQYLKDNPASAEELEAKIREALMPKAEVIEDKKIIAEKKVTEDKKVTASEG
CCCCCHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
SQDKNKDKALAAALGQIEKQFGKGSIMRLGDDAASMEIDSVSTGSLSLDVALGIGGLPY
CCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEECCCCCCCEEEEEEECCCCCCC
GRCVEVYGPESSGKTTLTLQVIAEAQKQGKTCAFIDAEHALDPTYAKKLGVDVDNLLISQ
CCEEEEECCCCCCCEEEEEHHHHHHHHCCCEEEEEEHHHCCCHHHHHHHCCCHHHHEECC
PDTGEQALEICDMLVRSGAVGVVVVDSVAALTPKAEIEGDMGDSHMGLQARLMSQALRKL
CCCHHHHHHHHHHHHHCCCCEEEEECHHHHCCCCHHCCCCCCCCCCHHHHHHHHHHHHHH
TGNIKQTNTMVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAIKNGEEII
HCCCEECCEEEEEEEEEEEEEEEEECCCCCCCCCCEEEEEEEHHHHHHHHCCCCCCHHHH
GNETRVKVVKNKVAPPFKQAEFQILYGKGINHFGELVDLGVKQEFVEKAGSWYSYNGAKI
CCCCEEEEEHHCCCCCCCCCCEEEEECCCCHHHHHHHHCCHHHHHHHHCCCEEECCCCCC
GQGKSNASQYLKDNPASAEELEAKIREALMPKAEVIEDKKIIAEKKVTEDKKVTASEG
CCCCCHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA