Definition | Psychromonas ingrahamii 37, complete genome. |
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Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is 119946864
Identifier: 119946864
GI number: 119946864
Start: 4021104
End: 4021577
Strand: Reverse
Name: 119946864
Synonym: Ping_3258
Alternate gene names: NA
Gene position: 4021577-4021104 (Counterclockwise)
Preceding gene: 119946865
Following gene: 119946863
Centisome position: 88.2
GC content: 42.62
Gene sequence:
>474_bases GTGAATAAAATTGCTGTATTTGCCGATGTGCAAAATATTTACTACACCACCCGCCAGGCTTATGGGAAACAGTTTAACTA CCGCAAATTATGGCAACAGCTCGAGCAGCAGGGAGATATTGTCAGCGCTTATGCCTATGCTATTGAGCGCGGGGATAACC AGCAGAAGAAATTTCAAGATGTATTAACGCACTTAGGTTTTGAGGTGAAACTTAAACCTTTTATTCAGCGCAGTGATGGC ACCGCCAAAGGTGATTGGGATGTGGGTATTACCATCGATATTATGGAAACCGCGCCGCAGGTAGATACTATTATTTTACT TTCAGGTGATGGCGATTTTGCGATTTTATTCGATAAAGTGAAACAGGCTTACGGCGTTAAAACAGAAGCTTATGGCGTGC CTAAATTAACCGCCAAAGCATTGATTGACGCATCTACTGTATTTCACCCGATTGAGGGTGAATTGTTGTTGTAG
Upstream 100 bases:
>100_bases AGCTAAAAAATTAGTTTGATAAAAAACCTTAAGTAATTAAGGTTTTTTTTTGCCGGTTTTTTACACCGCCGGGCAACAAC TCGATAAGGTATACAAACAC
Downstream 100 bases:
>100_bases GGTTGATACCAAGTAGACTCTTCACGCCCCAGCTGATGGTTATTTATTTGCTTCTAATAAGCTCGCTTGTTTAACCGGCA AGGGTTTTGATTTAGATGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 157; Mature: 157
Protein sequence:
>157_residues MNKIAVFADVQNIYYTTRQAYGKQFNYRKLWQQLEQQGDIVSAYAYAIERGDNQQKKFQDVLTHLGFEVKLKPFIQRSDG TAKGDWDVGITIDIMETAPQVDTIILLSGDGDFAILFDKVKQAYGVKTEAYGVPKLTAKALIDASTVFHPIEGELLL
Sequences:
>Translated_157_residues MNKIAVFADVQNIYYTTRQAYGKQFNYRKLWQQLEQQGDIVSAYAYAIERGDNQQKKFQDVLTHLGFEVKLKPFIQRSDG TAKGDWDVGITIDIMETAPQVDTIILLSGDGDFAILFDKVKQAYGVKTEAYGVPKLTAKALIDASTVFHPIEGELLL >Mature_157_residues MNKIAVFADVQNIYYTTRQAYGKQFNYRKLWQQLEQQGDIVSAYAYAIERGDNQQKKFQDVLTHLGFEVKLKPFIQRSDG TAKGDWDVGITIDIMETAPQVDTIILLSGDGDFAILFDKVKQAYGVKTEAYGVPKLTAKALIDASTVFHPIEGELLL
Specific function: Unknown
COG id: COG1432
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17683; Mature: 17683
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKIAVFADVQNIYYTTRQAYGKQFNYRKLWQQLEQQGDIVSAYAYAIERGDNQQKKFQD CCCEEEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHH VLTHLGFEVKLKPFIQRSDGTAKGDWDVGITIDIMETAPQVDTIILLSGDGDFAILFDKV HHHHCCCEEEEEEEEECCCCCCCCCCCEEEEEEEECCCCCCEEEEEEECCCCEEEHHHHH KQAYGVKTEAYGVPKLTAKALIDASTVFHPIEGELLL HHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEC >Mature Secondary Structure MNKIAVFADVQNIYYTTRQAYGKQFNYRKLWQQLEQQGDIVSAYAYAIERGDNQQKKFQD CCCEEEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHH VLTHLGFEVKLKPFIQRSDGTAKGDWDVGITIDIMETAPQVDTIILLSGDGDFAILFDKV HHHHCCCEEEEEEEEECCCCCCCCCCCEEEEEEEECCCCCCEEEEEEECCCCEEEHHHHH KQAYGVKTEAYGVPKLTAKALIDASTVFHPIEGELLL HHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA