Click here to switch to the map view.

The map label for this gene is 119946858

Identifier: 119946858

GI number: 119946858

Start: 4016371

End: 4016952

Strand: Reverse

Name: 119946858

Synonym: Ping_3252

Alternate gene names: NA

Gene position: 4016952-4016371 (Counterclockwise)

Preceding gene: 119946859

Following gene: 119946857

Centisome position: 88.1

GC content: 41.75

Gene sequence:

>582_bases
ATGCAGACTAATAATTTGAATTTCAACAAAAAAAAAGCACAGCAAGTCGGGTTTTCGCTGATTGAACTGCTGGTTGCTAT
GGTGATTAGTTTAACCCTGATTTTTGCCTGCACTGCACTGTACAGCTCATTAAAAGGCAGCATGACCACTGCTCAGAGTT
TGGCAACTGCACAGGAGTCATTACGGGGGACGTTTTATTTAATGTCACGTTCTGTTTATCAGGCTGATAGTGTCAGCATT
AACGGAGCCAATGACGAACTGACAGTTACTTATAACCCGCCTCCGACGGGGCAGATATACAGTTGTTTGGGAAACGCTAT
TGCTTCTGCTGCTACTGATACTTATTCCTCGGACGGTACCGGATTATATTGTGATGATGATGGCATAGGTACTGGTAGTG
CTGCGGAGTTGATTGCATTAGATATTCAAAGCTTAAATTTCACAACTATTAGCGATGCTAGTGGCACTGTTAATGGTTTA
ACAGTAACAATAAAAATAGAGGGGATGCCTGCTTCGTTATCTGATGGGCTGACGTTCACTTTAGCACTACGGCAAAAAAT
ATTATTGGATTTGGCTCAATAA

Upstream 100 bases:

>100_bases
ATTTCTTGGACAGATCCGCGCTTCGCGGATCATGTTACTTCCAATAGTACCTTAACCCTAAACGTGAAATTCCCTGATGA
TAATTGCGGGGCTCCATAGG

Downstream 100 bases:

>100_bases
TAAGTTCAAAAAGAACCGGAAAATATATGAAAAAGCACAAAGGTTTTGTACTGATACCCATACTTATAATTACTACTATT
AGCGCTATGTTGGCATTTTC

Product: Type IV pili fiber-building block protein

Products: NA

Alternate protein names: Prepilin-Type Cleavage/Methylation-Like Protein

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MQTNNLNFNKKKAQQVGFSLIELLVAMVISLTLIFACTALYSSLKGSMTTAQSLATAQESLRGTFYLMSRSVYQADSVSI
NGANDELTVTYNPPPTGQIYSCLGNAIASAATDTYSSDGTGLYCDDDGIGTGSAAELIALDIQSLNFTTISDASGTVNGL
TVTIKIEGMPASLSDGLTFTLALRQKILLDLAQ

Sequences:

>Translated_193_residues
MQTNNLNFNKKKAQQVGFSLIELLVAMVISLTLIFACTALYSSLKGSMTTAQSLATAQESLRGTFYLMSRSVYQADSVSI
NGANDELTVTYNPPPTGQIYSCLGNAIASAATDTYSSDGTGLYCDDDGIGTGSAAELIALDIQSLNFTTISDASGTVNGL
TVTIKIEGMPASLSDGLTFTLALRQKILLDLAQ
>Mature_193_residues
MQTNNLNFNKKKAQQVGFSLIELLVAMVISLTLIFACTALYSSLKGSMTTAQSLATAQESLRGTFYLMSRSVYQADSVSI
NGANDELTVTYNPPPTGQIYSCLGNAIASAATDTYSSDGTGLYCDDDGIGTGSAAELIALDIQSLNFTTISDASGTVNGL
TVTIKIEGMPASLSDGLTFTLALRQKILLDLAQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20291; Mature: 20291

Theoretical pI: Translated: 4.10; Mature: 4.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTNNLNFNKKKAQQVGFSLIELLVAMVISLTLIFACTALYSSLKGSMTTAQSLATAQES
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LRGTFYLMSRSVYQADSVSINGANDELTVTYNPPPTGQIYSCLGNAIASAATDTYSSDGT
HCCEEEEECCCCCCCCCEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCC
GLYCDDDGIGTGSAAELIALDIQSLNFTTISDASGTVNGLTVTIKIEGMPASLSDGLTFT
EEEECCCCCCCCCHHHEEEEECCCCCEEEECCCCCCCCEEEEEEEEECCCCCCCCCCEEH
LALRQKILLDLAQ
HHHHHHHHHHHCC
>Mature Secondary Structure
MQTNNLNFNKKKAQQVGFSLIELLVAMVISLTLIFACTALYSSLKGSMTTAQSLATAQES
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LRGTFYLMSRSVYQADSVSINGANDELTVTYNPPPTGQIYSCLGNAIASAATDTYSSDGT
HCCEEEEECCCCCCCCCEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCC
GLYCDDDGIGTGSAAELIALDIQSLNFTTISDASGTVNGLTVTIKIEGMPASLSDGLTFT
EEEECCCCCCCCCHHHEEEEECCCCCEEEECCCCCCCCEEEEEEEEECCCCCCCCCCEEH
LALRQKILLDLAQ
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA