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The map label for this gene is 119946837

Identifier: 119946837

GI number: 119946837

Start: 3985186

End: 3985581

Strand: Reverse

Name: 119946837

Synonym: Ping_3231

Alternate gene names: NA

Gene position: 3985581-3985186 (Counterclockwise)

Preceding gene: 119946838

Following gene: 119946836

Centisome position: 87.41

GC content: 39.65

Gene sequence:

>396_bases
ATGAAACATCAACAAGCGCTTTATTTACAGGAGATGGGGATAACCCGTTGGCAAGTCCGTAAACCTGATTTGTTCCCTCT
TTCTCTAAATTTATGCACTATTGATTTAAGTCATTATAAATTGTTGCTGGTGGCCTCGACAGCCGACTTTGCACACCCTC
TTATGCCCAGCATACTCAATGCCTTTAATTTAAAATTAAGCGAAGTATACTGCTGCTCAACGGATCAATTTGAAAACCTG
CAGGGACAGTTACCCGAACTTATCTGGTCAACTCTGGGTGAAATTAATCAACCCCATGGTCATAAGTTATTAACATCATC
AACCCTTGTACAGTTGGCTGCTGACGCAAATGCAAAAAAGGCATTATGGAAACAGTTTTGTGCTTTTAATCAATAA

Upstream 100 bases:

>100_bases
CCGGTGAGTTATTGGCCATTGATTATTGCTTCGGCTGACCTTCATTCAATGTTATTATTTGTTTTATTTTTTAAACATCA
GATAATTGATTGGATTTTCG

Downstream 100 bases:

>100_bases
GAGTGAGCTGCGGGCTACGAGCTACGAGTCACGAGCTCGAAGCTCGAATGCTCGAGGTTCGAAAGCTATGAGTAACGAGT
AACGAGTAATGAATACGAAA

Product: putative DNA polymerase III, psi subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 131; Mature: 131

Protein sequence:

>131_residues
MKHQQALYLQEMGITRWQVRKPDLFPLSLNLCTIDLSHYKLLLVASTADFAHPLMPSILNAFNLKLSEVYCCSTDQFENL
QGQLPELIWSTLGEINQPHGHKLLTSSTLVQLAADANAKKALWKQFCAFNQ

Sequences:

>Translated_131_residues
MKHQQALYLQEMGITRWQVRKPDLFPLSLNLCTIDLSHYKLLLVASTADFAHPLMPSILNAFNLKLSEVYCCSTDQFENL
QGQLPELIWSTLGEINQPHGHKLLTSSTLVQLAADANAKKALWKQFCAFNQ
>Mature_131_residues
MKHQQALYLQEMGITRWQVRKPDLFPLSLNLCTIDLSHYKLLLVASTADFAHPLMPSILNAFNLKLSEVYCCSTDQFENL
QGQLPELIWSTLGEINQPHGHKLLTSSTLVQLAADANAKKALWKQFCAFNQ

Specific function: Unknown

COG id: COG3050

COG function: function code L; DNA polymerase III, psi subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14857; Mature: 14857

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHQQALYLQEMGITRWQVRKPDLFPLSLNLCTIDLSHYKLLLVASTADFAHPLMPSILN
CCCCHHHHHHHCCCCEEEECCCCCCEEEEEEEEEECCCEEEEEEECCCHHHHHHHHHHHH
AFNLKLSEVYCCSTDQFENLQGQLPELIWSTLGEINQPHGHKLLTSSTLVQLAADANAKK
HHCCEEHEEEECCCCCHHHHHCCCHHHHHHHHHHCCCCCCCEEEHHHHHHHHHCCCCHHH
ALWKQFCAFNQ
HHHHHHHCCCC
>Mature Secondary Structure
MKHQQALYLQEMGITRWQVRKPDLFPLSLNLCTIDLSHYKLLLVASTADFAHPLMPSILN
CCCCHHHHHHHCCCCEEEECCCCCCEEEEEEEEEECCCEEEEEEECCCHHHHHHHHHHHH
AFNLKLSEVYCCSTDQFENLQGQLPELIWSTLGEINQPHGHKLLTSSTLVQLAADANAKK
HHCCEEHEEEECCCCCHHHHHCCCHHHHHHHHHHCCCCCCCEEEHHHHHHHHHCCCCHHH
ALWKQFCAFNQ
HHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA