Definition | Psychromonas ingrahamii 37, complete genome. |
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Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is 119946788
Identifier: 119946788
GI number: 119946788
Start: 3916736
End: 3918076
Strand: Reverse
Name: 119946788
Synonym: Ping_3181
Alternate gene names: NA
Gene position: 3918076-3916736 (Counterclockwise)
Preceding gene: 119946789
Following gene: 119946787
Centisome position: 85.93
GC content: 45.26
Gene sequence:
>1341_bases GTGAGTGAAACGGTTGCATCCCTTTTAGGATTGGAACAACAACTGCGCAAGGCATCTGATCTTGCGCAGTTGTTTTATAC TTTGGTCAATCAAATGGATAGTTGCGTACCTTATACGCAGGCGTTGCTGTTGGTTGGTAAAAATCTACAACATACTCAGA TTGTTGCAGCATCTGATATTCCAACGGTTGATTATACTTCGCCCTTGATAAGTTGGGCTGAACGGTTAAGTAAAGAACTG ATTGCCGCTGGTAATGCAAGGCAACAGCAAGTTATCAGGCCTAATGACTGCAGTGATGAATTGTCGGCTGAGTGGAAAAC ATTAGGGTTACCCTCCTTCCTTTTATGGCAGCCATTACCCGTGGAAGCCCTTGATAATGAGCCTGCTGGCGCATTGTTGC TGTTTAGGGAAAAACAGTTTTCTAAAGCCGAAACAGGTCTCTGCCAACATATAGGAGGCAGTGCCGGGCATGCCTTGTTT GCTTTGCGTCGTCAACAACCCTTGCGCGGAGTTATACCGCATTTAAAACAACGCAAAGTACTGTTTGCTGCACTCTTTAT TATCGGTCTGATGTTACTCATGCCCGTTAGGTTAAGCACCTTAGCACCTGTTGAAGTTGTTGCCAAAAACCCCTATGTCG TTGCATCGCCGCTTGATGGTGTTGTTGAAAAAATTGAGGTAACACCAAATCAGCTGATTAATAAGGGAGATCTGCTTGCA CAGTTGGAGACTAATCAGCTTAAAAGTGAGGAATCCATTGCTTATCAGGCATTGCTGGTTGCCAAAGCAGAGTTGAAAAC AGTTCAGCAAAGTAGCTTTATGGATCCTCGCCAAAAAGCTCGTATTGCAGAACTTCAATCACAGGTGAAATTAAAATCTA TACAATGGCAATATCTGGGTGAGCGTTTGTCGCGTGCGGCTATTTTATCGGAAATCTCTGGCGTAGCAGTACTTGATGAT CCTGGCGAGTGGAAGGGCAGGCCGGTTAAAATTGGTGAACGTATTTTGCTGGTGGCAGATCCTGCTCAGGTAGAGTTTGA AGTGATGTTACCGGTTAAGGACTCTATTTCATTATTACCCGGCACCGATGTGCGCATTTTTCTGGATAATGATCCTTTTA ATCCCTGGGCTGCACAACTCAAACATGCGGCCTATCAACCACGTCCCACAGCTGATCAGCAAATGGCTTATAAGCTGGTG GTTAGTCTTAATGCCCATAAAGGTAAACCCCCTCGGATTGGCCTGCATGGAACGGCTAAAATTTATGGCGAGCAGGTCAG TTTGTTCTTTTATCTGTTCCGCCGTCCGGTCACAACTTTTAGACAGTGGTTAGGGTGGTAG
Upstream 100 bases:
>100_bases CGGGACTGCAGCAACAACAGCGCAAGGCATCTGACCTTGCGCTGTTGTTTTATACATTTACCAAGCAAAGGCATTATTGC CTTTGGCATAAGGAAACACT
Downstream 100 bases:
>100_bases AGCCGGGTTTACCTGCTCTTAGGCAGGATCTGAAATTATTGCCCGGATCCCATGATGAAGATGGTGCTCCTCGTTGGCTG CTATATGACAGTGTCCGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 446; Mature: 445
Protein sequence:
>446_residues MSETVASLLGLEQQLRKASDLAQLFYTLVNQMDSCVPYTQALLLVGKNLQHTQIVAASDIPTVDYTSPLISWAERLSKEL IAAGNARQQQVIRPNDCSDELSAEWKTLGLPSFLLWQPLPVEALDNEPAGALLLFREKQFSKAETGLCQHIGGSAGHALF ALRRQQPLRGVIPHLKQRKVLFAALFIIGLMLLMPVRLSTLAPVEVVAKNPYVVASPLDGVVEKIEVTPNQLINKGDLLA QLETNQLKSEESIAYQALLVAKAELKTVQQSSFMDPRQKARIAELQSQVKLKSIQWQYLGERLSRAAILSEISGVAVLDD PGEWKGRPVKIGERILLVADPAQVEFEVMLPVKDSISLLPGTDVRIFLDNDPFNPWAAQLKHAAYQPRPTADQQMAYKLV VSLNAHKGKPPRIGLHGTAKIYGEQVSLFFYLFRRPVTTFRQWLGW
Sequences:
>Translated_446_residues MSETVASLLGLEQQLRKASDLAQLFYTLVNQMDSCVPYTQALLLVGKNLQHTQIVAASDIPTVDYTSPLISWAERLSKEL IAAGNARQQQVIRPNDCSDELSAEWKTLGLPSFLLWQPLPVEALDNEPAGALLLFREKQFSKAETGLCQHIGGSAGHALF ALRRQQPLRGVIPHLKQRKVLFAALFIIGLMLLMPVRLSTLAPVEVVAKNPYVVASPLDGVVEKIEVTPNQLINKGDLLA QLETNQLKSEESIAYQALLVAKAELKTVQQSSFMDPRQKARIAELQSQVKLKSIQWQYLGERLSRAAILSEISGVAVLDD PGEWKGRPVKIGERILLVADPAQVEFEVMLPVKDSISLLPGTDVRIFLDNDPFNPWAAQLKHAAYQPRPTADQQMAYKLV VSLNAHKGKPPRIGLHGTAKIYGEQVSLFFYLFRRPVTTFRQWLGW >Mature_445_residues SETVASLLGLEQQLRKASDLAQLFYTLVNQMDSCVPYTQALLLVGKNLQHTQIVAASDIPTVDYTSPLISWAERLSKELI AAGNARQQQVIRPNDCSDELSAEWKTLGLPSFLLWQPLPVEALDNEPAGALLLFREKQFSKAETGLCQHIGGSAGHALFA LRRQQPLRGVIPHLKQRKVLFAALFIIGLMLLMPVRLSTLAPVEVVAKNPYVVASPLDGVVEKIEVTPNQLINKGDLLAQ LETNQLKSEESIAYQALLVAKAELKTVQQSSFMDPRQKARIAELQSQVKLKSIQWQYLGERLSRAAILSEISGVAVLDDP GEWKGRPVKIGERILLVADPAQVEFEVMLPVKDSISLLPGTDVRIFLDNDPFNPWAAQLKHAAYQPRPTADQQMAYKLVV SLNAHKGKPPRIGLHGTAKIYGEQVSLFFYLFRRPVTTFRQWLGW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49605; Mature: 49474
Theoretical pI: Translated: 8.97; Mature: 8.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSETVASLLGLEQQLRKASDLAQLFYTLVNQMDSCVPYTQALLLVGKNLQHTQIVAASDI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCEEEEECCC PTVDYTSPLISWAERLSKELIAAGNARQQQVIRPNDCSDELSAEWKTLGLPSFLLWQPLP CCCCCHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCHHHHCCHHHCCCCHHHHCCCCC VEALDNEPAGALLLFREKQFSKAETGLCQHIGGSAGHALFALRRQQPLRGVIPHLKQRKV CHHCCCCCCCEEEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHH LFAALFIIGLMLLMPVRLSTLAPVEVVAKNPYVVASPLDGVVEKIEVTPNQLINKGDLLA HHHHHHHHHHHHHHHHHHHHCCCHHEEECCCEEEECCHHHHHHHHHCCHHHHCCCCCCEE QLETNQLKSEESIAYQALLVAKAELKTVQQSSFMDPRQKARIAELQSQVKLKSIQWQYLG EEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH ERLSRAAILSEISGVAVLDDPGEWKGRPVKIGERILLVADPAQVEFEVMLPVKDSISLLP HHHHHHHHHHHHCCEEEECCCCCCCCCEEEECCEEEEEECCCCEEEEEEECCCCCCEECC GTDVRIFLDNDPFNPWAAQLKHAAYQPRPTADQQMAYKLVVSLNAHKGKPPRIGLHGTAK CCCEEEEECCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHEEEEECCCCCCCEECCCCCHH IYGEQVSLFFYLFRRPVTTFRQWLGW HHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SETVASLLGLEQQLRKASDLAQLFYTLVNQMDSCVPYTQALLLVGKNLQHTQIVAASDI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCEEEEECCC PTVDYTSPLISWAERLSKELIAAGNARQQQVIRPNDCSDELSAEWKTLGLPSFLLWQPLP CCCCCHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCHHHHCCHHHCCCCHHHHCCCCC VEALDNEPAGALLLFREKQFSKAETGLCQHIGGSAGHALFALRRQQPLRGVIPHLKQRKV CHHCCCCCCCEEEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHH LFAALFIIGLMLLMPVRLSTLAPVEVVAKNPYVVASPLDGVVEKIEVTPNQLINKGDLLA HHHHHHHHHHHHHHHHHHHHCCCHHEEECCCEEEECCHHHHHHHHHCCHHHHCCCCCCEE QLETNQLKSEESIAYQALLVAKAELKTVQQSSFMDPRQKARIAELQSQVKLKSIQWQYLG EEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH ERLSRAAILSEISGVAVLDDPGEWKGRPVKIGERILLVADPAQVEFEVMLPVKDSISLLP HHHHHHHHHHHHCCEEEECCCCCCCCCEEEECCEEEEEECCCCEEEEEEECCCCCCEECC GTDVRIFLDNDPFNPWAAQLKHAAYQPRPTADQQMAYKLVVSLNAHKGKPPRIGLHGTAK CCCEEEEECCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHEEEEECCCCCCCEECCCCCHH IYGEQVSLFFYLFRRPVTTFRQWLGW HHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA