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The map label for this gene is yurN [H]

Identifier: 119946779

GI number: 119946779

Start: 3904313

End: 3905173

Strand: Reverse

Name: yurN [H]

Synonym: Ping_3172

Alternate gene names: 119946779

Gene position: 3905173-3904313 (Counterclockwise)

Preceding gene: 119946780

Following gene: 119946778

Centisome position: 85.65

GC content: 43.21

Gene sequence:

>861_bases
ATGAAGAAAACTAAATCCAACAAAGCATGGTTCTTAGTTCTACCAGTATTTATATTGGTGGCGTTCAGTGCCATTGTGCC
TTTAATGACAGTTGTAAATTATTCCATTCAAGATATTTTTGGGGCTACCCGTTATTTTGTCGGTGTCGAATGGTACCGCG
AAATACTGAATGATTCGCGTCTTCAGGACTCATTAGTCCGCCAGTTTGTGTTCTCGGGAAGCGTTTTGCTGATTGAAGTT
CCATTAGGGATAGCGGTCGCATTGATGATGCCCAAAGCTGGTAAATGGTCAGTTGTGACCTTGCTGGTATTAGCACTGCC
GCTCTTAGTGCCACTTAATGTAGTGGGAACAATTTGGCAAATCTTCGGGCGTGCCGATATCGGATTGTTTGGCTGGGGGC
TTAATGCGTTAGGCATGGATTATAACTATGCCGCAAATCCAATGGATGCCTGGTTTACAGTACTTCTGATGGATGTCTGG
CACTGGACATCGCTGATAGCTTTATTATGTTATTCAGGTTTGCGTGCTATTCCTGATGCCTATTACCAGGCTGCAAGCAT
TGACCGTGCCTCAAACTGGGCGGTATTTAGATACATTCAATTACCTAAACTGAAAAGTGTTTTGCTGATTGGGATACTGC
TGCGTTTTATGGACAGTTTTATGATTTATACCGAACCCTTCGTATTAACAGGTGGCGGACCGGGTAACTCAACTACTTTC
TTAAGTCAGGCATTAACTAAGATGGCGGTTGGGCAATTTGATATTGGACCTGCCGGTGCATTCTCGATCATTTATTTCTT
GATCATTCTATTAGTCAGCTGGCTGTTCTATACCGCAATGACCCATGGCGATAGTAAATAA

Upstream 100 bases:

>100_bases
GAGGATCAGAAAGTCCCTAAAGAACACGCTTTTATCAGTTTCCCTGAGCAGTGGTTAATGCTTTATATCGACGAATTTCT
TGTCGCCAAGGATGATCATA

Downstream 100 bases:

>100_bases
TTAACGCAAAGGATGTACTTATGAATAAGAAGAAAACACTGGGGCTTAGCGTATATATTATATTCTTGCTATTGCCTATC
TACTGGCTGTTAATGATGTC

Product: ABC sugar (glycerol) transporter binding protein inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MKKTKSNKAWFLVLPVFILVAFSAIVPLMTVVNYSIQDIFGATRYFVGVEWYREILNDSRLQDSLVRQFVFSGSVLLIEV
PLGIAVALMMPKAGKWSVVTLLVLALPLLVPLNVVGTIWQIFGRADIGLFGWGLNALGMDYNYAANPMDAWFTVLLMDVW
HWTSLIALLCYSGLRAIPDAYYQAASIDRASNWAVFRYIQLPKLKSVLLIGILLRFMDSFMIYTEPFVLTGGGPGNSTTF
LSQALTKMAVGQFDIGPAGAFSIIYFLIILLVSWLFYTAMTHGDSK

Sequences:

>Translated_286_residues
MKKTKSNKAWFLVLPVFILVAFSAIVPLMTVVNYSIQDIFGATRYFVGVEWYREILNDSRLQDSLVRQFVFSGSVLLIEV
PLGIAVALMMPKAGKWSVVTLLVLALPLLVPLNVVGTIWQIFGRADIGLFGWGLNALGMDYNYAANPMDAWFTVLLMDVW
HWTSLIALLCYSGLRAIPDAYYQAASIDRASNWAVFRYIQLPKLKSVLLIGILLRFMDSFMIYTEPFVLTGGGPGNSTTF
LSQALTKMAVGQFDIGPAGAFSIIYFLIILLVSWLFYTAMTHGDSK
>Mature_286_residues
MKKTKSNKAWFLVLPVFILVAFSAIVPLMTVVNYSIQDIFGATRYFVGVEWYREILNDSRLQDSLVRQFVFSGSVLLIEV
PLGIAVALMMPKAGKWSVVTLLVLALPLLVPLNVVGTIWQIFGRADIGLFGWGLNALGMDYNYAANPMDAWFTVLLMDVW
HWTSLIALLCYSGLRAIPDAYYQAASIDRASNWAVFRYIQLPKLKSVLLIGILLRFMDSFMIYTEPFVLTGGGPGNSTTF
LSQALTKMAVGQFDIGPAGAFSIIYFLIILLVSWLFYTAMTHGDSK

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=269, Percent_Identity=28.2527881040892, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1787570, Length=236, Percent_Identity=28.3898305084746, Blast_Score=63, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31896; Mature: 31896

Theoretical pI: Translated: 9.14; Mature: 9.14

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTKSNKAWFLVLPVFILVAFSAIVPLMTVVNYSIQDIFGATRYFVGVEWYREILNDSR
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
LQDSLVRQFVFSGSVLLIEVPLGIAVALMMPKAGKWSVVTLLVLALPLLVPLNVVGTIWQ
HHHHHHHHHHHCCCEEEEEECHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
IFGRADIGLFGWGLNALGMDYNYAANPMDAWFTVLLMDVWHWTSLIALLCYSGLRAIPDA
HHCCCCCCCEECCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YYQAASIDRASNWAVFRYIQLPKLKSVLLIGILLRFMDSFMIYTEPFVLTGGGPGNSTTF
HHHHHCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHH
LSQALTKMAVGQFDIGPAGAFSIIYFLIILLVSWLFYTAMTHGDSK
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKKTKSNKAWFLVLPVFILVAFSAIVPLMTVVNYSIQDIFGATRYFVGVEWYREILNDSR
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
LQDSLVRQFVFSGSVLLIEVPLGIAVALMMPKAGKWSVVTLLVLALPLLVPLNVVGTIWQ
HHHHHHHHHHHCCCEEEEEECHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
IFGRADIGLFGWGLNALGMDYNYAANPMDAWFTVLLMDVWHWTSLIALLCYSGLRAIPDA
HHCCCCCCCEECCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YYQAASIDRASNWAVFRYIQLPKLKSVLLIGILLRFMDSFMIYTEPFVLTGGGPGNSTTF
HHHHHCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHH
LSQALTKMAVGQFDIGPAGAFSIIYFLIILLVSWLFYTAMTHGDSK
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]