Click here to switch to the map view.

The map label for this gene is 119946768

Identifier: 119946768

GI number: 119946768

Start: 3892530

End: 3893288

Strand: Reverse

Name: 119946768

Synonym: Ping_3161

Alternate gene names: NA

Gene position: 3893288-3892530 (Counterclockwise)

Preceding gene: 119946769

Following gene: 119946767

Centisome position: 85.39

GC content: 43.08

Gene sequence:

>759_bases
ATGGCGTTGGCTATTTTTGATCTGGATGAAACCTTAGTTTGCGGTGACAGTTGCTCTCTTTTTTGCCAGTTTATGCAGGC
TGAAGGTCTGGTTGGCCCTGAGTTTGTTGAACGTGACAAGCGCATGATGGGTTTATACAACGCTGAAAAATTGGTGCTCG
ATGATTATATTGAATTTTTTATTGAGCCACTGAGCCATTTAAGCATCACAGCTATTGACGGAATAATGCCACGTTTTGTT
GAGCAGTATATTGCTCCGCGAATTTATGCCGAAGCCCAGCAGGTTTTGAAGAGTCAAGCCGCACAGGGAAAGCGCTTACT
GATTATTTCAGCCACAGCTGAATTCATTGTCAGTGCGGTTGCACGATACTTAGGCGTAGCCGATGTTTTAGCTATTCGTC
TCTCCAGTAAAGAGGGATATTACACAGGTAAAATAGAAGGCGTACCAACCTTTAGACAAGGCAAGGTTACCCGCTTGCAT
AATTGGTTAATCGAGCAAAATGAAAACCTGATCGATGCCCAGTTTTACAGTGACTCTATTAATGATCTTCCCCTGCTAGC
CTTGGTTGATTACCCCATTGCAACCAATCCTGATACGCAACTGACACAGATTGCAGCGCAGCGACATTGGCCTGTTCTGA
ACTGGTCTGCTTTTAATCCGTTAATTGCACAAACCAGCATCTCTGCACCTCAACCTAATAAATTATTTAACGAACAATCT
GTTCGACATTTTACCCCTAAGGAAATAACTCATGTCTAA

Upstream 100 bases:

>100_bases
TGTGTGATCTGCTGGGAATACAAGATCACGCAAAACCCGTAACGGAAGGTCTGTTATGTCAAGCGCCAGATGAAAATCTC
ACTTATCAGGGTGCTGCCTA

Downstream 100 bases:

>100_bases
ATTTCTGATTGCTGGTGCGCTAGCACTGATATCAGGTAATGCAGCGGCCGCGTGCCCGTCTATCGCTGGTGCTGATGCGG
GTGGTACTTATCCGCATCTA

Product: HAD family hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 251

Protein sequence:

>252_residues
MALAIFDLDETLVCGDSCSLFCQFMQAEGLVGPEFVERDKRMMGLYNAEKLVLDDYIEFFIEPLSHLSITAIDGIMPRFV
EQYIAPRIYAEAQQVLKSQAAQGKRLLIISATAEFIVSAVARYLGVADVLAIRLSSKEGYYTGKIEGVPTFRQGKVTRLH
NWLIEQNENLIDAQFYSDSINDLPLLALVDYPIATNPDTQLTQIAAQRHWPVLNWSAFNPLIAQTSISAPQPNKLFNEQS
VRHFTPKEITHV

Sequences:

>Translated_252_residues
MALAIFDLDETLVCGDSCSLFCQFMQAEGLVGPEFVERDKRMMGLYNAEKLVLDDYIEFFIEPLSHLSITAIDGIMPRFV
EQYIAPRIYAEAQQVLKSQAAQGKRLLIISATAEFIVSAVARYLGVADVLAIRLSSKEGYYTGKIEGVPTFRQGKVTRLH
NWLIEQNENLIDAQFYSDSINDLPLLALVDYPIATNPDTQLTQIAAQRHWPVLNWSAFNPLIAQTSISAPQPNKLFNEQS
VRHFTPKEITHV
>Mature_251_residues
ALAIFDLDETLVCGDSCSLFCQFMQAEGLVGPEFVERDKRMMGLYNAEKLVLDDYIEFFIEPLSHLSITAIDGIMPRFVE
QYIAPRIYAEAQQVLKSQAAQGKRLLIISATAEFIVSAVARYLGVADVLAIRLSSKEGYYTGKIEGVPTFRQGKVTRLHN
WLIEQNENLIDAQFYSDSINDLPLLALVDYPIATNPDTQLTQIAAQRHWPVLNWSAFNPLIAQTSISAPQPNKLFNEQSV
RHFTPKEITHV

Specific function: Unknown

COG id: COG0560

COG function: function code E; Phosphoserine phosphatase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the serB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023214
- InterPro:   IPR006383
- InterPro:   IPR006385 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28368; Mature: 28237

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALAIFDLDETLVCGDSCSLFCQFMQAEGLVGPEFVERDKRMMGLYNAEKLVLDDYIEFF
CEEEEEECCCEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHH
IEPLSHLSITAIDGIMPRFVEQYIAPRIYAEAQQVLKSQAAQGKRLLIISATAEFIVSAV
HHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHH
ARYLGVADVLAIRLSSKEGYYTGKIEGVPTFRQGKVTRLHNWLIEQNENLIDAQFYSDSI
HHHHHHHHHHHHEECCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEEHHCCCC
NDLPLLALVDYPIATNPDTQLTQIAAQRHWPVLNWSAFNPLIAQTSISAPQPNKLFNEQS
CCCEEEEEECCCCCCCCCHHHHHHHHHHCCCEEECCCCCCHHHHCCCCCCCCHHHHCCCH
VRHFTPKEITHV
HHCCCCHHHCCC
>Mature Secondary Structure 
ALAIFDLDETLVCGDSCSLFCQFMQAEGLVGPEFVERDKRMMGLYNAEKLVLDDYIEFF
EEEEEECCCEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHH
IEPLSHLSITAIDGIMPRFVEQYIAPRIYAEAQQVLKSQAAQGKRLLIISATAEFIVSAV
HHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHH
ARYLGVADVLAIRLSSKEGYYTGKIEGVPTFRQGKVTRLHNWLIEQNENLIDAQFYSDSI
HHHHHHHHHHHHEECCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEEHHCCCC
NDLPLLALVDYPIATNPDTQLTQIAAQRHWPVLNWSAFNPLIAQTSISAPQPNKLFNEQS
CCCEEEEEECCCCCCCCCHHHHHHHHHHCCCEEECCCCCCHHHHCCCCCCCCHHHHCCCH
VRHFTPKEITHV
HHCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]