Definition | Psychromonas ingrahamii 37, complete genome. |
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Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is 119946694
Identifier: 119946694
GI number: 119946694
Start: 3775410
End: 3776060
Strand: Reverse
Name: 119946694
Synonym: Ping_3076
Alternate gene names: NA
Gene position: 3776060-3775410 (Counterclockwise)
Preceding gene: 119946695
Following gene: 119946693
Centisome position: 82.82
GC content: 35.18
Gene sequence:
>651_bases ATGAAAAAATTAGTGGTAGCCCTAGCAGTATTCATTATGACTGGTTGTACGACCGTAAAATATAACCAGGCGGATAATTA TATAAAACAAGTTGATTATCCAGAAACTGGAAAAGTGATCACTGTTTATGTAGGTGGTCATTTAGTTCGAAAAGGGACAA TTTCAGAGGAAAATGTGTTGATTGTTTATCGGACAATTGATGGTGCCTTTTATGATATACCAGAAAAAAAATACCTACAA ATAGGGTTTGATAATAAAAAAGATTTTTACTCTGCCGTTGGTGTTGTACGTGGTGGTTTTTCAGATCCAATTAAGGCTTT AGCGCTAGGTAAACATAAAAATGCTGAATTGTGTGTAATAACAGTGTTTGGTGGCAGTGCTTGTTATGCTGGTGAATTCG AACGAAAAAAACAACTTTCTGAAAGAGGTCATAGCTTTCAGCAAGCACTTATTTACAGTGGTCGAGTAGGTAATCAAATC AATATTGGGTACAGAGAATTTAGCAATAACAGTCCGAGACCTGCTTTCAATAATGATGTTGAGTATGATTTATCTTCCTC AAATATCATCGGATATAAAGGTGCTTCTATAGAGGTTATCAAAGCTGATAACAGTAGTATTACATATAGGCTAATTCGGA ACTTTCCGTGA
Upstream 100 bases:
>100_bases TTTATATTCTTAATGATATAATTTTCATAAATAAATTGGTTTTTAAGTGCGAATGTAGATTAATACACTGTTAGCAGTAT AAATTAGTAATGGATATATA
Downstream 100 bases:
>100_bases AAAAATGCGAACAATTTGCCCAACATAGACGCTAATAGTTGTCGCTATTTCTGAAAAAGAAAAAACGTAAAAATACAGCG TTTTCCGACGATAATCAGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 216; Mature: 216
Protein sequence:
>216_residues MKKLVVALAVFIMTGCTTVKYNQADNYIKQVDYPETGKVITVYVGGHLVRKGTISEENVLIVYRTIDGAFYDIPEKKYLQ IGFDNKKDFYSAVGVVRGGFSDPIKALALGKHKNAELCVITVFGGSACYAGEFERKKQLSERGHSFQQALIYSGRVGNQI NIGYREFSNNSPRPAFNNDVEYDLSSSNIIGYKGASIEVIKADNSSITYRLIRNFP
Sequences:
>Translated_216_residues MKKLVVALAVFIMTGCTTVKYNQADNYIKQVDYPETGKVITVYVGGHLVRKGTISEENVLIVYRTIDGAFYDIPEKKYLQ IGFDNKKDFYSAVGVVRGGFSDPIKALALGKHKNAELCVITVFGGSACYAGEFERKKQLSERGHSFQQALIYSGRVGNQI NIGYREFSNNSPRPAFNNDVEYDLSSSNIIGYKGASIEVIKADNSSITYRLIRNFP >Mature_216_residues MKKLVVALAVFIMTGCTTVKYNQADNYIKQVDYPETGKVITVYVGGHLVRKGTISEENVLIVYRTIDGAFYDIPEKKYLQ IGFDNKKDFYSAVGVVRGGFSDPIKALALGKHKNAELCVITVFGGSACYAGEFERKKQLSERGHSFQQALIYSGRVGNQI NIGYREFSNNSPRPAFNNDVEYDLSSSNIIGYKGASIEVIKADNSSITYRLIRNFP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24038; Mature: 24038
Theoretical pI: Translated: 9.32; Mature: 9.32
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLVVALAVFIMTGCTTVKYNQADNYIKQVDYPETGKVITVYVGGHLVRKGTISEENVL CHHHHHHHHHHHHHCCCEEEECCCCCHHHHCCCCCCCCEEEEEECCEEEEECCCCCCCEE IVYRTIDGAFYDIPEKKYLQIGFDNKKDFYSAVGVVRGGFSDPIKALALGKHKNAELCVI EEEEECCCEEEECCCCEEEEEECCCCHHHHHHHHHHCCCCCCCHHHHEECCCCCCCEEEE TVFGGSACYAGEFERKKQLSERGHSFQQALIYSGRVGNQINIGYREFSNNSPRPAFNNDV EEECCCEEECCCHHHHHHHHHHCCHHHHHHEECCCCCCEEEECEEECCCCCCCCCCCCCC EYDLSSSNIIGYKGASIEVIKADNSSITYRLIRNFP EEECCCCCEEEECCCEEEEEECCCCCEEEEEEECCC >Mature Secondary Structure MKKLVVALAVFIMTGCTTVKYNQADNYIKQVDYPETGKVITVYVGGHLVRKGTISEENVL CHHHHHHHHHHHHHCCCEEEECCCCCHHHHCCCCCCCCEEEEEECCEEEEECCCCCCCEE IVYRTIDGAFYDIPEKKYLQIGFDNKKDFYSAVGVVRGGFSDPIKALALGKHKNAELCVI EEEEECCCEEEECCCCEEEEEECCCCHHHHHHHHHHCCCCCCCHHHHEECCCCCCCEEEE TVFGGSACYAGEFERKKQLSERGHSFQQALIYSGRVGNQINIGYREFSNNSPRPAFNNDV EEECCCEEECCCHHHHHHHHHHCCHHHHHHEECCCCCCEEEECEEECCCCCCCCCCCCCC EYDLSSSNIIGYKGASIEVIKADNSSITYRLIRNFP EEECCCCCEEEECCCEEEEEECCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA