Definition | Psychromonas ingrahamii 37, complete genome. |
---|---|
Accession | NC_008709 |
Length | 4,559,598 |
Click here to switch to the map view.
The map label for this gene is yeaC [H]
Identifier: 119946437
GI number: 119946437
Start: 3458434
End: 3459393
Strand: Direct
Name: yeaC [H]
Synonym: Ping_2812
Alternate gene names: 119946437
Gene position: 3458434-3459393 (Clockwise)
Preceding gene: 119946427
Following gene: 119946438
Centisome position: 75.85
GC content: 44.06
Gene sequence:
>960_bases ATGGCAAAACAACAGCTTGACGCATTACGCAGTTATCTGAATAAAATGATCCTAGGACAAAGTGAACTCGTTGATGGTTT ACTCATTGCATTACTTGCTGATGGTCATATTCTTGTTGAAAGCCCGCCGGGACTCGCTAAGACACGCGCTATTAATGCTC TTTCCAAGGGTATTGAGGGCGATTTTCACCGTATTCAATTTACCCCGGATCTACTGCCTTCTGATCTCACTGGTACAGAT ATTTTTCGCCAGGAAACAGGCGAGTTTATTTTTGAAAAAGGCCCTCTTTTTCATAACTTAATTCTTGCAGATGAAATAAA CCGCGCGCCGGCAAAAGTACAGTCAGCATTGCTTGAGGCAATGGCTGAACGGCAGATTACGGTTGGTAAAACAACCTACC CGTTGCCGGAACTTTTTTTAGTGATGGCGACCCAAAATCCGCTTGAGCAGGAAGGTACCTATCCATTGCCTGAAGCGCAA CTGGACCGCTTTATTATGCATCTGGAGCTTGATTACCCTAATGCTGAAACAGAAAAAGAAATTTTAAAGCTCAATCAGAA AGAGATCCTCAAAGAAAAAATTGCCGAGGTCACGCCACTTTTAAATGAGCAGATTTTCACTATTCGCCAGGAAATAATGA CCGTCAAAATGGCACCTCATTTAGAGCAGTATCTGATTGATTTAATCATTGCAACACGCCAGCCGCAGAATTACGGGTCG CAATTAAAAGAGTGGATCAGTTATGGTGCCAGCCCGCGGGCGACATTGGCGTTAATGCGCACGGCAAAAGCCCGTGCATG GCTTGACGGCCGAGACTTTGTAATGCCCGATGATATTATTCAAAATCTTTATCCGGTTTTACGCCACCGCCTTATTTTAA GCTACGAAGCGGAAGCGCAAGGTATTAATGCGAATAGTGTTATTCAAGAGATCATCAATCAGGTAGCCATTCCAGCCTAA
Upstream 100 bases:
>100_bases CTGCCAGTGAATATTTAAAAACGGGGAACTTTTTTCACTTGAGATAGTCCCTTAATCGCAGTATATTTTCCACCACCTTA ATTTTAAGTAGATTATAACT
Downstream 100 bases:
>100_bases TGACAAATCTAAAAGCAAAAAATGCCCTGTTTAACGATAGCCCTTATCAAACCGGTATTGATGTCAGCCTAAGCGAATTA TTGTGTTATAAAAAGCAGGC
Product: MoxR-like ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 319; Mature: 318
Protein sequence:
>319_residues MAKQQLDALRSYLNKMILGQSELVDGLLIALLADGHILVESPPGLAKTRAINALSKGIEGDFHRIQFTPDLLPSDLTGTD IFRQETGEFIFEKGPLFHNLILADEINRAPAKVQSALLEAMAERQITVGKTTYPLPELFLVMATQNPLEQEGTYPLPEAQ LDRFIMHLELDYPNAETEKEILKLNQKEILKEKIAEVTPLLNEQIFTIRQEIMTVKMAPHLEQYLIDLIIATRQPQNYGS QLKEWISYGASPRATLALMRTAKARAWLDGRDFVMPDDIIQNLYPVLRHRLILSYEAEAQGINANSVIQEIINQVAIPA
Sequences:
>Translated_319_residues MAKQQLDALRSYLNKMILGQSELVDGLLIALLADGHILVESPPGLAKTRAINALSKGIEGDFHRIQFTPDLLPSDLTGTD IFRQETGEFIFEKGPLFHNLILADEINRAPAKVQSALLEAMAERQITVGKTTYPLPELFLVMATQNPLEQEGTYPLPEAQ LDRFIMHLELDYPNAETEKEILKLNQKEILKEKIAEVTPLLNEQIFTIRQEIMTVKMAPHLEQYLIDLIIATRQPQNYGS QLKEWISYGASPRATLALMRTAKARAWLDGRDFVMPDDIIQNLYPVLRHRLILSYEAEAQGINANSVIQEIINQVAIPA >Mature_318_residues AKQQLDALRSYLNKMILGQSELVDGLLIALLADGHILVESPPGLAKTRAINALSKGIEGDFHRIQFTPDLLPSDLTGTDI FRQETGEFIFEKGPLFHNLILADEINRAPAKVQSALLEAMAERQITVGKTTYPLPELFLVMATQNPLEQEGTYPLPEAQL DRFIMHLELDYPNAETEKEILKLNQKEILKEKIAEVTPLLNEQIFTIRQEIMTVKMAPHLEQYLIDLIIATRQPQNYGSQ LKEWISYGASPRATLALMRTAKARAWLDGRDFVMPDDIIQNLYPVLRHRLILSYEAEAQGINANSVIQEIINQVAIPA
Specific function: Unknown
COG id: COG0714
COG function: function code R; MoxR-like ATPases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the moxR family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011703 - InterPro: IPR016366 [H]
Pfam domain/function: PF07726 AAA_3 [H]
EC number: NA
Molecular weight: Translated: 35961; Mature: 35830
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKQQLDALRSYLNKMILGQSELVDGLLIALLADGHILVESPPGLAKTRAINALSKGIEG CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHCCCC DFHRIQFTPDLLPSDLTGTDIFRQETGEFIFEKGPLFHNLILADEINRAPAKVQSALLEA CCEEEEECCCCCCCCCCCHHHHHHHHCCHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHH MAERQITVGKTTYPLPELFLVMATQNPLEQEGTYPLPEAQLDRFIMHLELDYPNAETEKE HHHCCEECCCCCCCHHHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHEEEECCCCCHHHHH ILKLNQKEILKEKIAEVTPLLNEQIFTIRQEIMTVKMAPHLEQYLIDLIIATRQPQNYGS HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH QLKEWISYGASPRATLALMRTAKARAWLDGRDFVMPDDIIQNLYPVLRHRLILSYEAEAQ HHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHEECHHCC GINANSVIQEIINQVAIPA CCCHHHHHHHHHHHHCCCC >Mature Secondary Structure AKQQLDALRSYLNKMILGQSELVDGLLIALLADGHILVESPPGLAKTRAINALSKGIEG CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHCCCC DFHRIQFTPDLLPSDLTGTDIFRQETGEFIFEKGPLFHNLILADEINRAPAKVQSALLEA CCEEEEECCCCCCCCCCCHHHHHHHHCCHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHH MAERQITVGKTTYPLPELFLVMATQNPLEQEGTYPLPEAQLDRFIMHLELDYPNAETEKE HHHCCEECCCCCCCHHHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHEEEECCCCCHHHHH ILKLNQKEILKEKIAEVTPLLNEQIFTIRQEIMTVKMAPHLEQYLIDLIIATRQPQNYGS HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH QLKEWISYGASPRATLALMRTAKARAWLDGRDFVMPDDIIQNLYPVLRHRLILSYEAEAQ HHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHEECHHCC GINANSVIQEIINQVAIPA CCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969499; 9384377 [H]