Definition | Psychromonas ingrahamii 37, complete genome. |
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Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is 119946403
Identifier: 119946403
GI number: 119946403
Start: 3417017
End: 3417562
Strand: Direct
Name: 119946403
Synonym: Ping_2777
Alternate gene names: NA
Gene position: 3417017-3417562 (Clockwise)
Preceding gene: 119946402
Following gene: 119946417
Centisome position: 74.94
GC content: 43.77
Gene sequence:
>546_bases ATGAAAAAATTTGCATTAGTTTCTTCTTTATTAGTACTGTTCGCCGCGCCAAGTTGGGGAATAACGATTACGGATGCAGG GGCTTATTATGGCACTGATGTTGGTAGTGTTGATACTTATAAAAATTCGGTAAAAATCGTGGGAAGTTCTGATCCAACAG CTGAAGAGGCTTGGGTTAACAGCGAGCTATCAAGCGCTGGAACAACCACATCATTCACAGGCAAAGATGAAGATGTCAAG TTTTACGGAACTGATGCCCTTAATACTTTTGCATTTTCTATGGCTCCTAACACGCCAGAATACTTTGTTATTAAAAATGC GACATACAGGGCCCTGTATCAGAATACAAACGAGCTGGGTTGGGGAGTGTTCAATTTTACAGACTTACCAGATAAAATGA ACCTAGGTAAGTTAGGGGATCCAATCAGCCATGTATCACGATTTGATTCGGGTACGACTCCTGTCCCGGAGCCTTCCACA ACTCTGTTGTTGGGGGCGGGGCTTCTTGGCTTCGGCTTATATTCCCGCAAGCGCAGCAAGCAATAA
Upstream 100 bases:
>100_bases AAAAATAACAAGGTAAACAGTAAGTTACAATATGGCATACAATATGCATTGCATTATTAGTAAATTAATCGATTTACTAA ATAATAATGTGGAGGTATAG
Downstream 100 bases:
>100_bases AATCTGTTGACAACATTTACCAAAGCGGGTCGCGAGTGACCCGCTTTTTTTATTTTTTTTTTGCCTCTTTAATGGACTGG TTTTCAGGCACCAGAGGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 181; Mature: 181
Protein sequence:
>181_residues MKKFALVSSLLVLFAAPSWGITITDAGAYYGTDVGSVDTYKNSVKIVGSSDPTAEEAWVNSELSSAGTTTSFTGKDEDVK FYGTDALNTFAFSMAPNTPEYFVIKNATYRALYQNTNELGWGVFNFTDLPDKMNLGKLGDPISHVSRFDSGTTPVPEPST TLLLGAGLLGFGLYSRKRSKQ
Sequences:
>Translated_181_residues MKKFALVSSLLVLFAAPSWGITITDAGAYYGTDVGSVDTYKNSVKIVGSSDPTAEEAWVNSELSSAGTTTSFTGKDEDVK FYGTDALNTFAFSMAPNTPEYFVIKNATYRALYQNTNELGWGVFNFTDLPDKMNLGKLGDPISHVSRFDSGTTPVPEPST TLLLGAGLLGFGLYSRKRSKQ >Mature_181_residues MKKFALVSSLLVLFAAPSWGITITDAGAYYGTDVGSVDTYKNSVKIVGSSDPTAEEAWVNSELSSAGTTTSFTGKDEDVK FYGTDALNTFAFSMAPNTPEYFVIKNATYRALYQNTNELGWGVFNFTDLPDKMNLGKLGDPISHVSRFDSGTTPVPEPST TLLLGAGLLGFGLYSRKRSKQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19526; Mature: 19526
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKFALVSSLLVLFAAPSWGITITDAGAYYGTDVGSVDTYKNSVKIVGSSDPTAEEAWVN CCHHHHHHHHHHHHCCCCCCEEEEECCCEECCCCCCCCCCCCEEEEEECCCCCHHHHHHC SELSSAGTTTSFTGKDEDVKFYGTDALNTFAFSMAPNTPEYFVIKNATYRALYQNTNELG CHHHCCCCCCEECCCCCCEEEEECCCCCEEEEEECCCCCCEEEEECCEEEEECCCCCCCC WGVFNFTDLPDKMNLGKLGDPISHVSRFDSGTTPVPEPSTTLLLGAGLLGFGLYSRKRSK CEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHCCC Q C >Mature Secondary Structure MKKFALVSSLLVLFAAPSWGITITDAGAYYGTDVGSVDTYKNSVKIVGSSDPTAEEAWVN CCHHHHHHHHHHHHCCCCCCEEEEECCCEECCCCCCCCCCCCEEEEEECCCCCHHHHHHC SELSSAGTTTSFTGKDEDVKFYGTDALNTFAFSMAPNTPEYFVIKNATYRALYQNTNELG CHHHCCCCCCEECCCCCCEEEEECCCCCEEEEEECCCCCCEEEEECCEEEEECCCCCCCC WGVFNFTDLPDKMNLGKLGDPISHVSRFDSGTTPVPEPSTTLLLGAGLLGFGLYSRKRSK CEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHCCC Q C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA