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The map label for this gene is cvpA [H]

Identifier: 119945653

GI number: 119945653

Start: 2392410

End: 2392910

Strand: Reverse

Name: cvpA [H]

Synonym: Ping_1966

Alternate gene names: 119945653

Gene position: 2392910-2392410 (Counterclockwise)

Preceding gene: 119945654

Following gene: 119945652

Centisome position: 52.48

GC content: 36.33

Gene sequence:

>501_bases
ATGAGTTGGTTTGATATCGCCATTCTTAGCATTATAGCTGTTTCATCTTTTATCAGTTTATTACGGGGTTTTACTAAAGA
AGCACTCTCCTTAGTGACTTGGTTCTGCGCTTTTTTCATTGCCAGTAATTTTTACCTTGAAGTGGCCGTCTATTTAACAG
AATTAGAAGACCCATTAATTCGCAACGCTGTTGCGATCGCTATTTTATTTATTGCGGTGTTATTACTGGGTGCCTTAATT
AACTACATTATTAACCGCTTGGTTGCTGTTACCGGGTTGTCCGGCACAGACAGACTACTTGGTATTGTTTTTGGTGCTAT
TCGTGGTGTTTTAATTATCAGTGCACTCCTGTTTTTTATTGATTCATTTACTAATTTAAACCAGAGCGACTGGTGGAAAG
AATCAACGTTGGCACCTGAGTTTGGAATAATTATCGAGTGGTTCTTTCAACATATTGAAAATGCCTCTAGTTTTTTGAAT
AATATTAAGGAAATCAATTAA

Upstream 100 bases:

>100_bases
TATTACCCTTCAAAGCAATAAATCCTTAGATTATTTACAGTAATTGCCGCGCTTCTCTGGTAAACTGCCGCCGTTTTCAA
TTTTATTTTAAAGGATCGCA

Downstream 100 bases:

>100_bases
ATGCAGACTCTGCGTTTAATTTACACCCATTTAAAATTTACAATCACTATCATTTATATAAAATAACCTGTTACTTGGTA
TGACTGATATAACTTATTTT

Product: colicin V production protein

Products: NA

Alternate protein names: Protein dedE; Pur regulon 18 kDa protein [H]

Number of amino acids: Translated: 166; Mature: 165

Protein sequence:

>166_residues
MSWFDIAILSIIAVSSFISLLRGFTKEALSLVTWFCAFFIASNFYLEVAVYLTELEDPLIRNAVAIAILFIAVLLLGALI
NYIINRLVAVTGLSGTDRLLGIVFGAIRGVLIISALLFFIDSFTNLNQSDWWKESTLAPEFGIIIEWFFQHIENASSFLN
NIKEIN

Sequences:

>Translated_166_residues
MSWFDIAILSIIAVSSFISLLRGFTKEALSLVTWFCAFFIASNFYLEVAVYLTELEDPLIRNAVAIAILFIAVLLLGALI
NYIINRLVAVTGLSGTDRLLGIVFGAIRGVLIISALLFFIDSFTNLNQSDWWKESTLAPEFGIIIEWFFQHIENASSFLN
NIKEIN
>Mature_165_residues
SWFDIAILSIIAVSSFISLLRGFTKEALSLVTWFCAFFIASNFYLEVAVYLTELEDPLIRNAVAIAILFIAVLLLGALIN
YIINRLVAVTGLSGTDRLLGIVFGAIRGVLIISALLFFIDSFTNLNQSDWWKESTLAPEFGIIIEWFFQHIENASSFLNN
IKEIN

Specific function: Required for colicin V production from plasmid IncFI ColV3-K30 [H]

COG id: COG1286

COG function: function code R; Uncharacterized membrane protein, required for colicin V production

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788652, Length=161, Percent_Identity=55.9006211180124, Blast_Score=194, Evalue=2e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003825 [H]

Pfam domain/function: PF02674 Colicin_V [H]

EC number: NA

Molecular weight: Translated: 18603; Mature: 18472

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSWFDIAILSIIAVSSFISLLRGFTKEALSLVTWFCAFFIASNFYLEVAVYLTELEDPLI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RNAVAIAILFIAVLLLGALINYIINRLVAVTGLSGTDRLLGIVFGAIRGVLIISALLFFI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
DSFTNLNQSDWWKESTLAPEFGIIIEWFFQHIENASSFLNNIKEIN
HHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SWFDIAILSIIAVSSFISLLRGFTKEALSLVTWFCAFFIASNFYLEVAVYLTELEDPLI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RNAVAIAILFIAVLLLGALINYIINRLVAVTGLSGTDRLLGIVFGAIRGVLIISALLFFI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
DSFTNLNQSDWWKESTLAPEFGIIIEWFFQHIENASSFLNNIKEIN
HHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 3040734; 2991286; 9205837; 9278503; 2542219 [H]