Definition Psychromonas ingrahamii 37, complete genome.
Accession NC_008709
Length 4,559,598

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The map label for this gene is 119945629

Identifier: 119945629

GI number: 119945629

Start: 2363460

End: 2364506

Strand: Reverse

Name: 119945629

Synonym: Ping_1940

Alternate gene names: NA

Gene position: 2364506-2363460 (Counterclockwise)

Preceding gene: 119945630

Following gene: 119945628

Centisome position: 51.86

GC content: 41.45

Gene sequence:

>1047_bases
ATGCGTAGAGAAAACATTAAAGGTTTATTTGAAACTGATTTTCCACTTATTCAGTCACCAATGGCAGGCGTTCAAGATAG
TAGATTAACTATTGCTGTCTGTCAGGCTGGTGGGTTAGGTTCATTGCCCTGTGGAATGCTGAGTATTGATAAAGTTGTTA
GCGAAATCAAGCTAATTAAAGCGGCAACGGATAAACCCTATAACCTTAATTTCTTCTGCCATAAGATGCCTGACTATGAT
CAAAAAAAGCAATCAAAATGGCAAGCTCAATTAAAGCCGTATTTTACAGAATTGGGTGTTGAGTGTGGAAGCCTGCCTAA
TAGTGCAACGCGAATACCTTTTAATCATGATGTAGCAGATGCCATTGAGTCATTTCACCCTGAATTTATTAGTTTTCATT
TTGGTCTTCCCGATAAGGAATTGCTTGCTCGTGTAAAAAGCTGGGGAACTAAAGTCGTTTCTTCTGCTACAACGATTGAA
GAAGCATTGTGGTTAGAGTCTAAAGGCGTTGATGGAATAATTGCTCAAGGTTTCGAAGCTGGTGGGCATCGGGGAATGTT
CTTGTCCGATGATGTTTCTACTCAGGTAGGCATGTCAGCTTTAGTCCTTCAAATTGTCAATAAAGTAAGCGTACCCGTCA
TCGCAGCGGGTGGTATAGCCGATAGTAAAGGTGTGCAAGCCGCTTTATTGCTTGGCGCTGGCGCGGTGCAAATCGGTACA
ACTTATTTGTTGTGTACAGAAGCAACAACATCTCAATTACACCGTTCAGCACTAAAGCATTCCAAATCTCAGCATACGGC
TATTACGAATGTTTTTTCAGGTAAACCAGCTCGCGGTATTGTTAACCGGGCGATCAAAGAATTGGGTTATATAAATGTTT
TAGCGCCAGATTTTCCTTACGCTTCCATTGAAATGACACAATTACGAGGTTATTTTGAAAAGCTAGGGGCTGATGATTTT
TCACCGCTATGGAGCGGACAAAACACTTCTGGCTGTAAAGAGATTTCTGCAAAGAAGTTAACCTTACGGCTTGCTGCTAG
GTGCTAA

Upstream 100 bases:

>100_bases
CGTGATGAGGTTAGTTTTGAACGTCAAATTACTGCCTTACAAGCCGTTAAATATCGTCATATGACGGTTGCCGGTAAGCA
AACTCTTAAGGGAATGATTG

Downstream 100 bases:

>100_bases
CAAACTTAGCCTGTTATTAAGGCGTTGAGGCTGTAGAATAACTCGTTTTTTATAAATTTATGAAAATTTATACTTTTTTA
ACTTATTGTTTTAAAAGTAA

Product: 2-nitropropane dioxygenase, NPD

Products: NA

Alternate protein names: Nitroalkane oxidase [H]

Number of amino acids: Translated: 348; Mature: 348

Protein sequence:

>348_residues
MRRENIKGLFETDFPLIQSPMAGVQDSRLTIAVCQAGGLGSLPCGMLSIDKVVSEIKLIKAATDKPYNLNFFCHKMPDYD
QKKQSKWQAQLKPYFTELGVECGSLPNSATRIPFNHDVADAIESFHPEFISFHFGLPDKELLARVKSWGTKVVSSATTIE
EALWLESKGVDGIIAQGFEAGGHRGMFLSDDVSTQVGMSALVLQIVNKVSVPVIAAGGIADSKGVQAALLLGAGAVQIGT
TYLLCTEATTSQLHRSALKHSKSQHTAITNVFSGKPARGIVNRAIKELGYINVLAPDFPYASIEMTQLRGYFEKLGADDF
SPLWSGQNTSGCKEISAKKLTLRLAARC

Sequences:

>Translated_348_residues
MRRENIKGLFETDFPLIQSPMAGVQDSRLTIAVCQAGGLGSLPCGMLSIDKVVSEIKLIKAATDKPYNLNFFCHKMPDYD
QKKQSKWQAQLKPYFTELGVECGSLPNSATRIPFNHDVADAIESFHPEFISFHFGLPDKELLARVKSWGTKVVSSATTIE
EALWLESKGVDGIIAQGFEAGGHRGMFLSDDVSTQVGMSALVLQIVNKVSVPVIAAGGIADSKGVQAALLLGAGAVQIGT
TYLLCTEATTSQLHRSALKHSKSQHTAITNVFSGKPARGIVNRAIKELGYINVLAPDFPYASIEMTQLRGYFEKLGADDF
SPLWSGQNTSGCKEISAKKLTLRLAARC
>Mature_348_residues
MRRENIKGLFETDFPLIQSPMAGVQDSRLTIAVCQAGGLGSLPCGMLSIDKVVSEIKLIKAATDKPYNLNFFCHKMPDYD
QKKQSKWQAQLKPYFTELGVECGSLPNSATRIPFNHDVADAIESFHPEFISFHFGLPDKELLARVKSWGTKVVSSATTIE
EALWLESKGVDGIIAQGFEAGGHRGMFLSDDVSTQVGMSALVLQIVNKVSVPVIAAGGIADSKGVQAALLLGAGAVQIGT
TYLLCTEATTSQLHRSALKHSKSQHTAITNVFSGKPARGIVNRAIKELGYINVLAPDFPYASIEMTQLRGYFEKLGADDF
SPLWSGQNTSGCKEISAKKLTLRLAARC

Specific function: Catalyzes the oxidation of alkyl nitronates to produce the corresponding carbonyl compounds and nitrites [H]

COG id: COG2070

COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitronate monooxygenase family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6322609, Length=354, Percent_Identity=30.225988700565, Blast_Score=149, Evalue=8e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004136
- InterPro:   IPR013785 [H]

Pfam domain/function: PF03060 NPD [H]

EC number: =1.13.12.16 [H]

Molecular weight: Translated: 37654; Mature: 37654

Theoretical pI: Translated: 8.28; Mature: 8.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRENIKGLFETDFPLIQSPMAGVQDSRLTIAVCQAGGLGSLPCGMLSIDKVVSEIKLIK
CCCCCCCCCCCCCCHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHH
AATDKPYNLNFFCHKMPDYDQKKQSKWQAQLKPYFTELGVECGSLPNSATRIPFNHDVAD
HCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCHHH
AIESFHPEFISFHFGLPDKELLARVKSWGTKVVSSATTIEEALWLESKGVDGIIAQGFEA
HHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCC
GGHRGMFLSDDVSTQVGMSALVLQIVNKVSVPVIAAGGIADSKGVQAALLLGAGAVQIGT
CCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCEEEEEECCCHHHHCC
TYLLCTEATTSQLHRSALKHSKSQHTAITNVFSGKPARGIVNRAIKELGYINVLAPDFPY
EEEEEECHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEECCCCCC
ASIEMTQLRGYFEKLGADDFSPLWSGQNTSGCKEISAKKLTLRLAARC
CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHEEEEECCC
>Mature Secondary Structure
MRRENIKGLFETDFPLIQSPMAGVQDSRLTIAVCQAGGLGSLPCGMLSIDKVVSEIKLIK
CCCCCCCCCCCCCCHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHH
AATDKPYNLNFFCHKMPDYDQKKQSKWQAQLKPYFTELGVECGSLPNSATRIPFNHDVAD
HCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCHHH
AIESFHPEFISFHFGLPDKELLARVKSWGTKVVSSATTIEEALWLESKGVDGIIAQGFEA
HHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCC
GGHRGMFLSDDVSTQVGMSALVLQIVNKVSVPVIAAGGIADSKGVQAALLLGAGAVQIGT
CCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCEEEEEECCCHHHHCC
TYLLCTEATTSQLHRSALKHSKSQHTAITNVFSGKPARGIVNRAIKELGYINVLAPDFPY
EEEEEECHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEECCCCCC
ASIEMTQLRGYFEKLGADDFSPLWSGQNTSGCKEISAKKLTLRLAARC
CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA