Definition Psychromonas ingrahamii 37, complete genome.
Accession NC_008709
Length 4,559,598

Click here to switch to the map view.

The map label for this gene is 119945628

Identifier: 119945628

GI number: 119945628

Start: 2362732

End: 2363304

Strand: Reverse

Name: 119945628

Synonym: Ping_1939

Alternate gene names: NA

Gene position: 2363304-2362732 (Counterclockwise)

Preceding gene: 119945629

Following gene: 119945627

Centisome position: 51.83

GC content: 38.74

Gene sequence:

>573_bases
TTGGGCAATGAAATGAAAATAAACACCTTTATTCTATTCTTATCTCTCGTTCTTACATTAAGTGGTTGCGTACCTAATGC
TGTTACATACTACAGGCCCGCAGCTGAGGGAGGCTACGTTCATGCCAAAGGGTTTGTGCCAACAGTATCCTTACTCGACA
TCGTTATCGGGAGTCCCCATCAGAGTGTCCATATAAGAGCCTGGGCAAATGATGGAGAACATAAAAATATCGTTTATATC
GGTTTTTCAGGATGCGCATGGAATAATATAAATTTTACGTCGACAGATTTTAAAGTGATTGATCTTGATAACAATATCGC
GATAAATGTGTTGTCTGTTTTTGCCAATAAACATGACAGCTTTAAAAAGTTAAACACAATTCCCTATGCCGCACCACATA
AGACGTTACCAGGAATGACAAGGTTTTCAATCGACATTCAATTACCGAATCCAATGCCTAAGAAGTTTGAGTTATTGAGT
CCATTACTTATCATTGATGGTGAAAAAATAACGCTGCCAACAATTAGGTTTGAGCAACAGGTCTGGGTTGGCATAAGCCC
ACTTAATTGTTGA

Upstream 100 bases:

>100_bases
ATTTATGAAAATTTATACTTTTTTAACTTATTGTTTTAAAAGTAAATTAAATTTTGAGAAAGTGTTTTTTTTCTGAAAAT
GGAGAAATTCTACAGCCTCG

Downstream 100 bases:

>100_bases
AAAGGCTTAATAAGTTGCTACCCTCACACTTGGTACAGTGGTTGCGGTTTTTGCTAAAAACAAACAGTACCAACTTACCG
GCTGGTGGGCAGGCTTTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 189

Protein sequence:

>190_residues
MGNEMKINTFILFLSLVLTLSGCVPNAVTYYRPAAEGGYVHAKGFVPTVSLLDIVIGSPHQSVHIRAWANDGEHKNIVYI
GFSGCAWNNINFTSTDFKVIDLDNNIAINVLSVFANKHDSFKKLNTIPYAAPHKTLPGMTRFSIDIQLPNPMPKKFELLS
PLLIIDGEKITLPTIRFEQQVWVGISPLNC

Sequences:

>Translated_190_residues
MGNEMKINTFILFLSLVLTLSGCVPNAVTYYRPAAEGGYVHAKGFVPTVSLLDIVIGSPHQSVHIRAWANDGEHKNIVYI
GFSGCAWNNINFTSTDFKVIDLDNNIAINVLSVFANKHDSFKKLNTIPYAAPHKTLPGMTRFSIDIQLPNPMPKKFELLS
PLLIIDGEKITLPTIRFEQQVWVGISPLNC
>Mature_189_residues
GNEMKINTFILFLSLVLTLSGCVPNAVTYYRPAAEGGYVHAKGFVPTVSLLDIVIGSPHQSVHIRAWANDGEHKNIVYIG
FSGCAWNNINFTSTDFKVIDLDNNIAINVLSVFANKHDSFKKLNTIPYAAPHKTLPGMTRFSIDIQLPNPMPKKFELLSP
LLIIDGEKITLPTIRFEQQVWVGISPLNC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21084; Mature: 20953

Theoretical pI: Translated: 8.09; Mature: 8.09

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNEMKINTFILFLSLVLTLSGCVPNAVTYYRPAAEGGYVHAKGFVPTVSLLDIVIGSPH
CCCCEEHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCEEEECCCCCHHHEEHHHCCCCC
QSVHIRAWANDGEHKNIVYIGFSGCAWNNINFTSTDFKVIDLDNNIAINVLSVFANKHDS
CEEEEEEECCCCCCCEEEEEEECCEEECCCCCCCCCEEEEECCCCEEEEEEEEECCCCCC
FKKLNTIPYAAPHKTLPGMTRFSIDIQLPNPMPKKFELLSPLLIIDGEKITLPTIRFEQQ
HHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHCCEEEECCCEEEECEEEECCE
VWVGISPLNC
EEEEEECCCC
>Mature Secondary Structure 
GNEMKINTFILFLSLVLTLSGCVPNAVTYYRPAAEGGYVHAKGFVPTVSLLDIVIGSPH
CCCEEHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCEEEECCCCCHHHEEHHHCCCCC
QSVHIRAWANDGEHKNIVYIGFSGCAWNNINFTSTDFKVIDLDNNIAINVLSVFANKHDS
CEEEEEEECCCCCCCEEEEEEECCEEECCCCCCCCCEEEEECCCCEEEEEEEEECCCCCC
FKKLNTIPYAAPHKTLPGMTRFSIDIQLPNPMPKKFELLSPLLIIDGEKITLPTIRFEQQ
HHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHCCEEEECCCEEEECEEEECCE
VWVGISPLNC
EEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA