Definition | Psychromonas ingrahamii 37, complete genome. |
---|---|
Accession | NC_008709 |
Length | 4,559,598 |
Click here to switch to the map view.
The map label for this gene is 119945621
Identifier: 119945621
GI number: 119945621
Start: 2357031
End: 2357993
Strand: Reverse
Name: 119945621
Synonym: Ping_1931
Alternate gene names: NA
Gene position: 2357993-2357031 (Counterclockwise)
Preceding gene: 119945622
Following gene: 119945620
Centisome position: 51.71
GC content: 36.03
Gene sequence:
>963_bases ATGAGAATAGTTCCAATGGTATCTTTCGCAGTCCTTATTTTGTCAGGTTGTACATCGACACCAACGGGTAATATTGATGC TTTTGGCATTGCTGCTGCTGATGTAACCAGTAAAATCGACACAGTAATAAGTGATTATAATAAAGCCAATGTTAATGACA AACTGGTTGCGATGGCTCAATCAAATAAGAAATATGTCACATCAGATATGGATCCGATTAAACAAATTATTATTCGGGAT TCGGACAAAAAAAACTTCGCACTATACAAAGCTAATAATGCACTTGGAGGCTATGCCGCTTCTTTATCCGATTTAGCTAA TGCGGGTTCGCGTGAAGAATTGGCATTGGCTGGCGTGAAATTGTCAACATCGCTTAAGGGAATGAATGAGCAATATAAGT CATTCAAAGAAACCGAAAGCGATTTAATAAGCGATGAAAATAGTGGAAAGATAAGCCGGGTTATTACAGAAATTTCTCGT TATTACGTTGAGTACAAAAGGGGGGAAGCACTTAAGGAAATTATAATAGCAGCAGATTCTAGTGTGCAAATAATAGGAAA TATAATAAATGATCAGTTACTGATGGGCGTAATAGAAGGGCGTTTATATACAATGAAGGGAAATGAGTTGGCTGGATATT TTTCTGATTATAATACACAGACCGACGAGCTTTCATTTGCGAAAAAGAAAAAAATGCTGGATGAAATTTATGAGAAATAT ATCGCGATGGAATCGACAACGGCGACGGTAGTTCAAGCACAACAAGCAATATTATCTGTCATGGAAGCGCATAGTGTATT GACGGAGGAATTGAAAAAAAATCGTTTTAGCAGCCAAAATATAGCTAAATCTATTAAAAATATAAAAACTGTTCATAGGA GTTTGGACGATCTGGAAGAACTTATGAAGAGCTGTGAAACAAAGATAATATCAGATGATGAGAAAGGTATTATCTGTCAA TAA
Upstream 100 bases:
>100_bases GCAAATAATTCCCTACACCTCGTTGTCTGTATATAACCTTGTTAGATTCAATAAACGCAGAGAGTCAATCTGTTGTATTT AAACACAAAGGAGAAATTAC
Downstream 100 bases:
>100_bases TCCAGCTGAAAACTCAAAAAAATAAATTATTAGGAGAACAATTATGTCTGAGTTGTCTGAATTAAACAAAGCAATTAATG CTCTAAACGATCTTTGGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 320; Mature: 320
Protein sequence:
>320_residues MRIVPMVSFAVLILSGCTSTPTGNIDAFGIAAADVTSKIDTVISDYNKANVNDKLVAMAQSNKKYVTSDMDPIKQIIIRD SDKKNFALYKANNALGGYAASLSDLANAGSREELALAGVKLSTSLKGMNEQYKSFKETESDLISDENSGKISRVITEISR YYVEYKRGEALKEIIIAADSSVQIIGNIINDQLLMGVIEGRLYTMKGNELAGYFSDYNTQTDELSFAKKKKMLDEIYEKY IAMESTTATVVQAQQAILSVMEAHSVLTEELKKNRFSSQNIAKSIKNIKTVHRSLDDLEELMKSCETKIISDDEKGIICQ
Sequences:
>Translated_320_residues MRIVPMVSFAVLILSGCTSTPTGNIDAFGIAAADVTSKIDTVISDYNKANVNDKLVAMAQSNKKYVTSDMDPIKQIIIRD SDKKNFALYKANNALGGYAASLSDLANAGSREELALAGVKLSTSLKGMNEQYKSFKETESDLISDENSGKISRVITEISR YYVEYKRGEALKEIIIAADSSVQIIGNIINDQLLMGVIEGRLYTMKGNELAGYFSDYNTQTDELSFAKKKKMLDEIYEKY IAMESTTATVVQAQQAILSVMEAHSVLTEELKKNRFSSQNIAKSIKNIKTVHRSLDDLEELMKSCETKIISDDEKGIICQ >Mature_320_residues MRIVPMVSFAVLILSGCTSTPTGNIDAFGIAAADVTSKIDTVISDYNKANVNDKLVAMAQSNKKYVTSDMDPIKQIIIRD SDKKNFALYKANNALGGYAASLSDLANAGSREELALAGVKLSTSLKGMNEQYKSFKETESDLISDENSGKISRVITEISR YYVEYKRGEALKEIIIAADSSVQIIGNIINDQLLMGVIEGRLYTMKGNELAGYFSDYNTQTDELSFAKKKKMLDEIYEKY IAMESTTATVVQAQQAILSVMEAHSVLTEELKKNRFSSQNIAKSIKNIKTVHRSLDDLEELMKSCETKIISDDEKGIICQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35333; Mature: 35333
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIVPMVSFAVLILSGCTSTPTGNIDAFGIAAADVTSKIDTVISDYNKANVNDKLVAMAQ CCCCHHHHHHHHHHHCCCCCCCCCCCCCEEHHHHHHHHHHHHHHCCCCCCCCHHEEEEEC SNKKYVTSDMDPIKQIIIRDSDKKNFALYKANNALGGYAASLSDLANAGSREELALAGVK CCCCEECCCHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCHHHHCCEE LSTSLKGMNEQYKSFKETESDLISDENSGKISRVITEISRYYVEYKRGEALKEIIIAADS HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SVQIIGNIINDQLLMGVIEGRLYTMKGNELAGYFSDYNTQTDELSFAKKKKMLDEIYEKY CHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH IAMESTTATVVQAQQAILSVMEAHSVLTEELKKNRFSSQNIAKSIKNIKTVHRSLDDLEE HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH LMKSCETKIISDDEKGIICQ HHHHHHHCEECCCCCCCCCC >Mature Secondary Structure MRIVPMVSFAVLILSGCTSTPTGNIDAFGIAAADVTSKIDTVISDYNKANVNDKLVAMAQ CCCCHHHHHHHHHHHCCCCCCCCCCCCCEEHHHHHHHHHHHHHHCCCCCCCCHHEEEEEC SNKKYVTSDMDPIKQIIIRDSDKKNFALYKANNALGGYAASLSDLANAGSREELALAGVK CCCCEECCCHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCHHHHCCEE LSTSLKGMNEQYKSFKETESDLISDENSGKISRVITEISRYYVEYKRGEALKEIIIAADS HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SVQIIGNIINDQLLMGVIEGRLYTMKGNELAGYFSDYNTQTDELSFAKKKKMLDEIYEKY CHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH IAMESTTATVVQAQQAILSVMEAHSVLTEELKKNRFSSQNIAKSIKNIKTVHRSLDDLEE HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH LMKSCETKIISDDEKGIICQ HHHHHHHCEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA