Definition | Psychromonas ingrahamii 37, complete genome. |
---|---|
Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is yeiH [C]
Identifier: 119945393
GI number: 119945393
Start: 2040927
End: 2041874
Strand: Reverse
Name: yeiH [C]
Synonym: Ping_1682
Alternate gene names: 119945393
Gene position: 2041874-2040927 (Counterclockwise)
Preceding gene: 119945399
Following gene: 119945392
Centisome position: 44.78
GC content: 40.72
Gene sequence:
>948_bases ATGGAAAAGTTGTTAAATAATGCAAAATGGAAAAAACAAAATCTAATTTTTATGGGTGCCGCAATTTTATGTTTATCGCC CGTCGTTTCGTCCCCTATTGCATTACTTCTCGGCTTTACACTGGCCATGCTTGGATTAGTCCCTAAACGGATAAATATGA ACTTATTAACCAAAAATCTATTAGCCTATTCAATCATAGGGTTAGGATTTGGGATTAATTTAGATCAGGCTATTGCTGCC AGCAAAGATGCTTTTGGTCTGATTGTATTGTCTCTGCTGAGTACCTTAATCATTGGCTGGCTGTTGACTAAACGCTTACG AATCAATCCAAAAACAGGTTATTTAATTGCCTCCGGCACGGCAGTTTGTGGCGGTAGTGCCATTGCAGCTGTCGCGCCGG CAATTAATGCGAGCAAGGATCAAACCTCCATTGCACTGGCCACTGTTTTTCTGCTCAATTCAGTGGCATTATTTTTATTC CCCTTTATCGGCCATTTGCTGAGTATGACGCAACATGCCTTTGGGGTTTGGTGTGCAATCGCAATCCATGATACCTCATC GGTTGTTGGGGCAGCTTCTGCCTATGGTGATGAAGCCTTGTTAATCGCAACCACACTAAAACTGGCACGCGCCTTATGGA TTATTCCCATTGCATTTATTAGCGCCCTGCTTTTTAAAGGAGATAATAAGAAAATCACGGTGCCAACGTTTATTTTATTC TACTGCCTGTCGATACTGGTCGCTTATTATTTACCGCAATTTTCGTCTTTATATGAAATTATTTTTTCCGTTTCTAAACG TTTTCTGGTGCTGAGTTTATTTTTAATCGGATCTGCCATCAGCTTTAATAAAATCAAATCTGCAGGGGCCAAGCCACTTG TTTTAGGGGTTCTTCTTTGGATAATAACCGCTACGGGCTCACTGGCTTATATTCAGTTACTAATGTAA
Upstream 100 bases:
>100_bases CGAAGCTCAAAACTCATTGATAAAATTGATAACATAGCTCTGGTATACTGAACTCAGAAATTTATTTATAATGGATTAGA TTTTAATATTGGAAGAGCAC
Downstream 100 bases:
>100_bases AACGCGGCAGCCTAAATATTTTTGCAAAAAAACAGTCGCTACTTTTTAGCACGCTTGTTTTGAGTGAATAAAATATAGCC GAGTAAGACAAAAGCACCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 315; Mature: 315
Protein sequence:
>315_residues MEKLLNNAKWKKQNLIFMGAAILCLSPVVSSPIALLLGFTLAMLGLVPKRINMNLLTKNLLAYSIIGLGFGINLDQAIAA SKDAFGLIVLSLLSTLIIGWLLTKRLRINPKTGYLIASGTAVCGGSAIAAVAPAINASKDQTSIALATVFLLNSVALFLF PFIGHLLSMTQHAFGVWCAIAIHDTSSVVGAASAYGDEALLIATTLKLARALWIIPIAFISALLFKGDNKKITVPTFILF YCLSILVAYYLPQFSSLYEIIFSVSKRFLVLSLFLIGSAISFNKIKSAGAKPLVLGVLLWIITATGSLAYIQLLM
Sequences:
>Translated_315_residues MEKLLNNAKWKKQNLIFMGAAILCLSPVVSSPIALLLGFTLAMLGLVPKRINMNLLTKNLLAYSIIGLGFGINLDQAIAA SKDAFGLIVLSLLSTLIIGWLLTKRLRINPKTGYLIASGTAVCGGSAIAAVAPAINASKDQTSIALATVFLLNSVALFLF PFIGHLLSMTQHAFGVWCAIAIHDTSSVVGAASAYGDEALLIATTLKLARALWIIPIAFISALLFKGDNKKITVPTFILF YCLSILVAYYLPQFSSLYEIIFSVSKRFLVLSLFLIGSAISFNKIKSAGAKPLVLGVLLWIITATGSLAYIQLLM >Mature_315_residues MEKLLNNAKWKKQNLIFMGAAILCLSPVVSSPIALLLGFTLAMLGLVPKRINMNLLTKNLLAYSIIGLGFGINLDQAIAA SKDAFGLIVLSLLSTLIIGWLLTKRLRINPKTGYLIASGTAVCGGSAIAAVAPAINASKDQTSIALATVFLLNSVALFLF PFIGHLLSMTQHAFGVWCAIAIHDTSSVVGAASAYGDEALLIATTLKLARALWIIPIAFISALLFKGDNKKITVPTFILF YCLSILVAYYLPQFSSLYEIIFSVSKRFLVLSLFLIGSAISFNKIKSAGAKPLVLGVLLWIITATGSLAYIQLLM
Specific function: Unknown
COG id: COG2855
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0324 family [H]
Homologues:
Organism=Escherichia coli, GI1788482, Length=268, Percent_Identity=28.7313432835821, Blast_Score=96, Evalue=3e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018383 [H]
Pfam domain/function: PF03601 Cons_hypoth698 [H]
EC number: NA
Molecular weight: Translated: 33712; Mature: 33712
Theoretical pI: Translated: 10.29; Mature: 10.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKLLNNAKWKKQNLIFMGAAILCLSPVVSSPIALLLGFTLAMLGLVPKRINMNLLTKNL CCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCHHHHHHHH LAYSIIGLGFGINLDQAIAASKDAFGLIVLSLLSTLIIGWLLTKRLRINPKTGYLIASGT HHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEECCC AVCGGSAIAAVAPAINASKDQTSIALATVFLLNSVALFLFPFIGHLLSMTQHAFGVWCAI EECCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE AIHDTSSVVGAASAYGDEALLIATTLKLARALWIIPIAFISALLFKGDNKKITVPTFILF EEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHH YCLSILVAYYLPQFSSLYEIIFSVSKRFLVLSLFLIGSAISFNKIKSAGAKPLVLGVLLW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHH IITATGSLAYIQLLM HHHCCCCHHHHHEEC >Mature Secondary Structure MEKLLNNAKWKKQNLIFMGAAILCLSPVVSSPIALLLGFTLAMLGLVPKRINMNLLTKNL CCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCHHHHHHHH LAYSIIGLGFGINLDQAIAASKDAFGLIVLSLLSTLIIGWLLTKRLRINPKTGYLIASGT HHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEECCC AVCGGSAIAAVAPAINASKDQTSIALATVFLLNSVALFLFPFIGHLLSMTQHAFGVWCAI EECCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE AIHDTSSVVGAASAYGDEALLIATTLKLARALWIIPIAFISALLFKGDNKKITVPTFILF EEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHH YCLSILVAYYLPQFSSLYEIIFSVSKRFLVLSLFLIGSAISFNKIKSAGAKPLVLGVLLW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHH IITATGSLAYIQLLM HHHCCCCHHHHHEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA