Definition | Psychromonas ingrahamii 37, complete genome. |
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Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is 119945363
Identifier: 119945363
GI number: 119945363
Start: 2008604
End: 2009182
Strand: Reverse
Name: 119945363
Synonym: Ping_1651
Alternate gene names: NA
Gene position: 2009182-2008604 (Counterclockwise)
Preceding gene: 119945364
Following gene: 119945361
Centisome position: 44.06
GC content: 39.55
Gene sequence:
>579_bases ATGGTATCCGATGATAGCAGTGTATATATAGACTTTAAACAACAACCTAAGCTTATCCGTAGCGCTATCGAAGATCTTAT CCCCTTTAAGAAATGGGGGTTTGTCGAACAGTTTTATGCTCTGATAGAATGGGTAAACGGTCCACGTTCATTATTGGAAA GTAACGATTGCGTGTTTAATCCGGCAGAAAATAATTCTGATCAGCAATATCCTTACGCGAAAAAGTGCAGTGCACGGTTA ATGGTCTTGTTTCGTGATATCCCGGAGAACTGTCAGGCGAAAAGTATTGATTGGTTGATCCAAAATATACTGCAGCATGT AACGACAACTAAACCTGGATTTAAAGCTGGCGCTATTTGTTTATCCCAATCACCGACCTGTTATTTAGTCTTGGGTAATC AACCTGATACTGGCGGTATAGGTCATCAAGTGACCTTAACCTTTTTTGCTTACGGCAAAAATGATCGACGCTGTTATGAG AATATGCAGGAAGTATTATCAATTGCGCAAAGTAGTTTATTGCGAGTCAATAAAGGCATACAAAATGGAGAAGTTGATGC ACTCTATGGTGCATCATAA
Upstream 100 bases:
>100_bases CCCTTCATTAGTATATAACTCAACAAAGGCAGAAACTGTGGACGCTTTTATTTCCAAGCAGATTGATAACTCAGCATTAA GATCACACCCATGGACGAGT
Downstream 100 bases:
>100_bases TGCAGGATCTGCTGACCTTTCTGATACAAATTTTGTTCAATCAAAAGTGTTCTGAGTAAGGCAGGAAAAGTGAAGCATAG TTATTCTCTATAAATGACAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MVSDDSSVYIDFKQQPKLIRSAIEDLIPFKKWGFVEQFYALIEWVNGPRSLLESNDCVFNPAENNSDQQYPYAKKCSARL MVLFRDIPENCQAKSIDWLIQNILQHVTTTKPGFKAGAICLSQSPTCYLVLGNQPDTGGIGHQVTLTFFAYGKNDRRCYE NMQEVLSIAQSSLLRVNKGIQNGEVDALYGAS
Sequences:
>Translated_192_residues MVSDDSSVYIDFKQQPKLIRSAIEDLIPFKKWGFVEQFYALIEWVNGPRSLLESNDCVFNPAENNSDQQYPYAKKCSARL MVLFRDIPENCQAKSIDWLIQNILQHVTTTKPGFKAGAICLSQSPTCYLVLGNQPDTGGIGHQVTLTFFAYGKNDRRCYE NMQEVLSIAQSSLLRVNKGIQNGEVDALYGAS >Mature_192_residues MVSDDSSVYIDFKQQPKLIRSAIEDLIPFKKWGFVEQFYALIEWVNGPRSLLESNDCVFNPAENNSDQQYPYAKKCSARL MVLFRDIPENCQAKSIDWLIQNILQHVTTTKPGFKAGAICLSQSPTCYLVLGNQPDTGGIGHQVTLTFFAYGKNDRRCYE NMQEVLSIAQSSLLRVNKGIQNGEVDALYGAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21598; Mature: 21598
Theoretical pI: Translated: 5.78; Mature: 5.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSDDSSVYIDFKQQPKLIRSAIEDLIPFKKWGFVEQFYALIEWVNGPRSLLESNDCVFN CCCCCCEEEEEECCCCHHHHHHHHHHHCCHHCCHHHHHHHHHHHHCCHHHHHCCCCCEEC PAENNSDQQYPYAKKCSARLMVLFRDIPENCQAKSIDWLIQNILQHVTTTKPGFKAGAIC CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEE LSQSPTCYLVLGNQPDTGGIGHQVTLTFFAYGKNDRRCYENMQEVLSIAQSSLLRVNKGI ECCCCEEEEEECCCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCC QNGEVDALYGAS CCCCCCEECCCC >Mature Secondary Structure MVSDDSSVYIDFKQQPKLIRSAIEDLIPFKKWGFVEQFYALIEWVNGPRSLLESNDCVFN CCCCCCEEEEEECCCCHHHHHHHHHHHCCHHCCHHHHHHHHHHHHCCHHHHHCCCCCEEC PAENNSDQQYPYAKKCSARLMVLFRDIPENCQAKSIDWLIQNILQHVTTTKPGFKAGAIC CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEE LSQSPTCYLVLGNQPDTGGIGHQVTLTFFAYGKNDRRCYENMQEVLSIAQSSLLRVNKGI ECCCCEEEEEECCCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCC QNGEVDALYGAS CCCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA