Definition | Psychromonas ingrahamii 37, complete genome. |
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Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is insN1 [C]
Identifier: 119945353
GI number: 119945353
Start: 1998641
End: 1998928
Strand: Reverse
Name: insN1 [C]
Synonym: Ping_1641
Alternate gene names: 119945353
Gene position: 1998928-1998641 (Counterclockwise)
Preceding gene: 119945357
Following gene: 119945352
Centisome position: 43.84
GC content: 36.46
Gene sequence:
>288_bases ATGAATACAAAACGTCAATACAAAACTTATACGAGTGAATTTAAAACAGAAGCATTAGCGTTAATCAGTGAGCAAGATTA TAGCGTTCAGGAGGCAGCTTCTGCTTTAGGTATCATAACTAGCCTGCTTTATAGCTGGAAACAAAAAACCGAAGAGCATG CCAATTCAACGGTAAATTCTGATGAACGGACTGAGTTATTATCCTTACGAAAAGAAGTTAAACAGCTTCGTATGGAAAAA GAAATACTAAAAAAGGCCAGCGCCTTCTTCGCAAAAGAAATGAAGTAA
Upstream 100 bases:
>100_bases AAGTTGCACTGTATTTTAATAATAGTTCAGTTAGGATATTCTGTTCTAATTGAACTGGATACTTTAATTTTGGATAATAC AATCCACTATTGAGGTGTAC
Downstream 100 bases:
>100_bases AGTTTCGATATATTCGAGCATATCGCTCTAAATATTCAATAAAACTACTTTGTAATGTACTACAAGTGAGTCGTAGTGCA TTTTATGATTGGCTTGAACG
Product: transposase IS3/IS911 family protein
Products: NA
Alternate protein names: ISSod1 Transposase OrfA; Transposase And Inactivated Derivatives; Transposase IS; Transposase OrfA For Insertion Sequence Element
Number of amino acids: Translated: 95; Mature: 95
Protein sequence:
>95_residues MNTKRQYKTYTSEFKTEALALISEQDYSVQEAASALGIITSLLYSWKQKTEEHANSTVNSDERTELLSLRKEVKQLRMEK EILKKASAFFAKEMK
Sequences:
>Translated_95_residues MNTKRQYKTYTSEFKTEALALISEQDYSVQEAASALGIITSLLYSWKQKTEEHANSTVNSDERTELLSLRKEVKQLRMEK EILKKASAFFAKEMK >Mature_95_residues MNTKRQYKTYTSEFKTEALALISEQDYSVQEAASALGIITSLLYSWKQKTEEHANSTVNSDERTELLSLRKEVKQLRMEK EILKKASAFFAKEMK
Specific function: Involved in the transposition of the insertion sequence is911 [C]
COG id: COG2963
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11013; Mature: 11013
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTKRQYKTYTSEFKTEALALISEQDYSVQEAASALGIITSLLYSWKQKTEEHANSTVNS CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC DERTELLSLRKEVKQLRMEKEILKKASAFFAKEMK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNTKRQYKTYTSEFKTEALALISEQDYSVQEAASALGIITSLLYSWKQKTEEHANSTVNS CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC DERTELLSLRKEVKQLRMEKEILKKASAFFAKEMK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA