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The map label for this gene is smpA [H]

Identifier: 119945321

GI number: 119945321

Start: 1959862

End: 1960308

Strand: Reverse

Name: smpA [H]

Synonym: Ping_1605

Alternate gene names: 119945321

Gene position: 1960308-1959862 (Counterclockwise)

Preceding gene: 119945330

Following gene: 119945318

Centisome position: 42.99

GC content: 36.91

Gene sequence:

>447_bases
ATGCCTATTAAAAATATCGCCACCTTTTTCTTTCTTATTTTTGCACTCTCGGGATGTACATCTCTTTATGATACCTTTGT
ATATCAAATTGATGTTACACAGGGTAATTACATTGAGGATGAAAAATTAGATCAAATACTCCTTGGTATGTCTCAAGAAC
AAGTTATTTTTATTCTTGGCTCTCCCATGTTGATTGATCAATTCGATTCATCAAAATGGTACTATATTCGTTACATTAAA
CCGGGTGGAGAACCGATTCAACAGGACAAAGTCGTTTTTACCTTTGACAATCTGCTGCTGACCGATATTGCAAGAGAAGG
TACAATTGATATAAATCCGCTGATTAAAACGCCTAAGGCAAGAAATGTGCCGAATGCAGCGACTGAAGACCCCAGCACTA
GCGATAACCCGCAAACAGATAATGACACACCAGTTATTGTTAATTAA

Upstream 100 bases:

>100_bases
ATGACAAATTTTTCCTTTAATATTTTTACAAGTCAGCGACCCTTGGGTATTATTACTTTAATTAATATCCACTCACTTCA
ACTAAGATGTTGTTTAAACC

Downstream 100 bases:

>100_bases
CTTAGATAGCGTTAGCCGTTATCAATTGAGTTCAATTGATAACGGCTAACTTATTAATAATAATGAGGATGAAAATGAAA
AGACTATTTTTTACTCATTT

Product: Outer membrane lipoprotein OmlA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 147

Protein sequence:

>148_residues
MPIKNIATFFFLIFALSGCTSLYDTFVYQIDVTQGNYIEDEKLDQILLGMSQEQVIFILGSPMLIDQFDSSKWYYIRYIK
PGGEPIQQDKVVFTFDNLLLTDIAREGTIDINPLIKTPKARNVPNAATEDPSTSDNPQTDNDTPVIVN

Sequences:

>Translated_148_residues
MPIKNIATFFFLIFALSGCTSLYDTFVYQIDVTQGNYIEDEKLDQILLGMSQEQVIFILGSPMLIDQFDSSKWYYIRYIK
PGGEPIQQDKVVFTFDNLLLTDIAREGTIDINPLIKTPKARNVPNAATEDPSTSDNPQTDNDTPVIVN
>Mature_147_residues
PIKNIATFFFLIFALSGCTSLYDTFVYQIDVTQGNYIEDEKLDQILLGMSQEQVIFILGSPMLIDQFDSSKWYYIRYIKP
GGEPIQQDKVVFTFDNLLLTDIAREGTIDINPLIKTPKARNVPNAATEDPSTSDNPQTDNDTPVIVN

Specific function: Unknown

COG id: COG2913

COG function: function code J; Small protein A (tmRNA-binding)

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smpA/omlA family [H]

Homologues:

Organism=Escherichia coli, GI87082138, Length=98, Percent_Identity=34.6938775510204, Blast_Score=74, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007450 [H]

Pfam domain/function: PF04355 SmpA_OmlA [H]

EC number: NA

Molecular weight: Translated: 16718; Mature: 16587

Theoretical pI: Translated: 3.99; Mature: 3.99

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIKNIATFFFLIFALSGCTSLYDTFVYQIDVTQGNYIEDEKLDQILLGMSQEQVIFILG
CCHHHHHHHHHHHHHHHCHHHHHHEEEEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEEC
SPMLIDQFDSSKWYYIRYIKPGGEPIQQDKVVFTFDNLLLTDIAREGTIDINPLIKTPKA
CCEEEEECCCCCEEEEEEECCCCCCCCCCCEEEEECCCHHHHHHCCCCEECCCCCCCCCC
RNVPNAATEDPSTSDNPQTDNDTPVIVN
CCCCCCCCCCCCCCCCCCCCCCCCEEEC
>Mature Secondary Structure 
PIKNIATFFFLIFALSGCTSLYDTFVYQIDVTQGNYIEDEKLDQILLGMSQEQVIFILG
CHHHHHHHHHHHHHHHCHHHHHHEEEEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEEC
SPMLIDQFDSSKWYYIRYIKPGGEPIQQDKVVFTFDNLLLTDIAREGTIDINPLIKTPKA
CCEEEEECCCCCEEEEEEECCCCCCCCCCCEEEEECCCHHHHHHCCCCEECCCCCCCCCC
RNVPNAATEDPSTSDNPQTDNDTPVIVN
CCCCCCCCCCCCCCCCCCCCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA