| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
Click here to switch to the map view.
The map label for this gene is 119944876
Identifier: 119944876
GI number: 119944876
Start: 1403760
End: 1404158
Strand: Direct
Name: 119944876
Synonym: Ping_1119
Alternate gene names: NA
Gene position: 1403760-1404158 (Clockwise)
Preceding gene: 119944875
Following gene: 119944877
Centisome position: 30.79
GC content: 40.1
Gene sequence:
>399_bases ATGATTAAAAATATTGACCTAACCATCGACATAACCAAGGCGGAGCAACTTTTAAGCGGCAGTGATGCCTTTATCCTGAA TATAGTCGCTTTATGGTGCAGCGACTGCACGGCACAAGCTGAAAATTTACCCGCATTTGCACAGTTACTTTCCGATCAGG GAATGCCTGTTTATCAACTCAATGTGCAGAACATTAAAGATCAATATCTGTCAGCACAACATAAAGCACTGACGATTAAA CTTGGCGGGCGCGGTTATCCGCGTACGGTGTTAATGTTAGGTAATAAAATAGTTGATTCAGATAATATCGAAATTATCAG TGCTGAGCAACTTGCAACCTTAGCGAATAAATTTACTCTGCTGTTAAGTAATAGCCAGTGTATCAAAGACAGCCTTTAA
Upstream 100 bases:
>100_bases CAGTTGAATTGGTGTTCTTTTTACACCTTTTAGATAAAAAATATAAGGTTTGGTGTTTTTTCTTTTTAGAATCAACTTTT TTAAATAACGGAATGTAAAC
Downstream 100 bases:
>100_bases ATTTTATATTAGCTCAGGAGAGCTTAATGCAAAATCTCTTTTAACGGCTGCTCGAGAGCACTGGTCTGTTGAAAATAACT GGCATTGGTAATTAGATATA
Product: periplasmic thioredoxin of cytochrome c-type biogenesis
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 132; Mature: 132
Protein sequence:
>132_residues MIKNIDLTIDITKAEQLLSGSDAFILNIVALWCSDCTAQAENLPAFAQLLSDQGMPVYQLNVQNIKDQYLSAQHKALTIK LGGRGYPRTVLMLGNKIVDSDNIEIISAEQLATLANKFTLLLSNSQCIKDSL
Sequences:
>Translated_132_residues MIKNIDLTIDITKAEQLLSGSDAFILNIVALWCSDCTAQAENLPAFAQLLSDQGMPVYQLNVQNIKDQYLSAQHKALTIK LGGRGYPRTVLMLGNKIVDSDNIEIISAEQLATLANKFTLLLSNSQCIKDSL >Mature_132_residues MIKNIDLTIDITKAEQLLSGSDAFILNIVALWCSDCTAQAENLPAFAQLLSDQGMPVYQLNVQNIKDQYLSAQHKALTIK LGGRGYPRTVLMLGNKIVDSDNIEIISAEQLATLANKFTLLLSNSQCIKDSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14469; Mature: 14469
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKNIDLTIDITKAEQLLSGSDAFILNIVALWCSDCTAQAENLPAFAQLLSDQGMPVYQL CCCCEEEEEEECHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCEEEEE NVQNIKDQYLSAQHKALTIKLGGRGYPRTVLMLGNKIVDSDNIEIISAEQLATLANKFTL EHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEECCEEECCCCEEEEEHHHHHHHHHHEEE LLSNSQCIKDSL EECCCHHHCCCC >Mature Secondary Structure MIKNIDLTIDITKAEQLLSGSDAFILNIVALWCSDCTAQAENLPAFAQLLSDQGMPVYQL CCCCEEEEEEECHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCEEEEE NVQNIKDQYLSAQHKALTIKLGGRGYPRTVLMLGNKIVDSDNIEIISAEQLATLANKFTL EHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEECCEEECCCCEEEEEHHHHHHHHHHEEE LLSNSQCIKDSL EECCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA