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The map label for this gene is cspG [H]

Identifier: 119944855

GI number: 119944855

Start: 1367823

End: 1368026

Strand: Direct

Name: cspG [H]

Synonym: Ping_1097

Alternate gene names: 119944855

Gene position: 1367823-1368026 (Clockwise)

Preceding gene: 119944854

Following gene: 119944858

Centisome position: 30.0

GC content: 43.14

Gene sequence:

>204_bases
ATGAGTATTGGGACAGTTAAGTGGTTTAATGCAGATAAAGGTTTTGGTTTCATTACACCAGAGGAAGGGGGAAACGACTT
GTTTGTACACCATTCTCAAATTAAAACGGGAGGGTATGCGACTCTCAACGAAGGCCAGAAAGTTGAATATGAAGTTGGGG
AAGGTCAGAAGGGACCCTGTGCCAATAACGTTGTGCCTCTTTAA

Upstream 100 bases:

>100_bases
TTTGTTGCTATTTAAATAAATACTATATTACTGGCTTTGCCTATGTGAATTTTTATTATGGTAGAAAGGCCGAGGTAAGA
TATAAAAGAGGATCTACGTT

Downstream 100 bases:

>100_bases
GAGTAAGTATTTTACGGCAACAGAGTTAGTCTGTGCACAAGGATAGGTATTGATGGCGCATTGTCAATCTGCACAAAAAG
ATAGGCGCTGTTGCCGTATT

Product: cold-shock DNA-binding domain-containing protein

Products: NA

Alternate protein names: CPS-G [H]

Number of amino acids: Translated: 67; Mature: 66

Protein sequence:

>67_residues
MSIGTVKWFNADKGFGFITPEEGGNDLFVHHSQIKTGGYATLNEGQKVEYEVGEGQKGPCANNVVPL

Sequences:

>Translated_67_residues
MSIGTVKWFNADKGFGFITPEEGGNDLFVHHSQIKTGGYATLNEGQKVEYEVGEGQKGPCANNVVPL
>Mature_66_residues
SIGTVKWFNADKGFGFITPEEGGNDLFVHHSQIKTGGYATLNEGQKVEYEVGEGQKGPCANNVVPL

Specific function: Unknown

COG id: COG1278

COG function: function code K; Cold shock proteins

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 CSD (cold-shock) domain [H]

Homologues:

Organism=Escherichia coli, GI2367114, Length=64, Percent_Identity=60.9375, Blast_Score=91, Evalue=2e-20,
Organism=Escherichia coli, GI1786841, Length=64, Percent_Identity=62.5, Blast_Score=89, Evalue=4e-20,
Organism=Escherichia coli, GI1789979, Length=64, Percent_Identity=60.9375, Blast_Score=88, Evalue=1e-19,
Organism=Escherichia coli, GI1788126, Length=64, Percent_Identity=59.375, Blast_Score=83, Evalue=3e-18,
Organism=Escherichia coli, GI1787839, Length=62, Percent_Identity=59.6774193548387, Blast_Score=82, Evalue=6e-18,
Organism=Escherichia coli, GI1787107, Length=67, Percent_Identity=55.2238805970149, Blast_Score=78, Evalue=1e-16,
Organism=Escherichia coli, GI1787834, Length=64, Percent_Identity=54.6875, Blast_Score=76, Evalue=4e-16,
Organism=Drosophila melanogaster, GI24658520, Length=58, Percent_Identity=43.1034482758621, Blast_Score=62, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019844
- InterPro:   IPR012156
- InterPro:   IPR011129
- InterPro:   IPR002059
- InterPro:   IPR012340
- InterPro:   IPR016027 [H]

Pfam domain/function: PF00313 CSD [H]

EC number: NA

Molecular weight: Translated: 7213; Mature: 7082

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: PS00352 COLD_SHOCK

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIGTVKWFNADKGFGFITPEEGGNDLFVHHSQIKTGGYATLNEGQKVEYEVGEGQKGPC
CCCCCEEEECCCCCCEEECCCCCCCEEEEECCEECCCCEEECCCCCEEEEECCCCCCCCC
ANNVVPL
CCCCCCC
>Mature Secondary Structure 
SIGTVKWFNADKGFGFITPEEGGNDLFVHHSQIKTGGYATLNEGQKVEYEVGEGQKGPC
CCCCEEEECCCCCCEEECCCCCCCEEEEECCEECCCCEEECCCCCEEEEECCCCCCCCC
ANNVVPL
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]