Definition | Psychromonas ingrahamii 37, complete genome. |
---|---|
Accession | NC_008709 |
Length | 4,559,598 |
Click here to switch to the map view.
The map label for this gene is 119944773
Identifier: 119944773
GI number: 119944773
Start: 1278173
End: 1278388
Strand: Direct
Name: 119944773
Synonym: Ping_1015
Alternate gene names: NA
Gene position: 1278173-1278388 (Clockwise)
Preceding gene: 119944770
Following gene: 119944775
Centisome position: 28.03
GC content: 35.19
Gene sequence:
>216_bases ATGTCTAAACACCGTATTTACAAAAAAATTGAAATGGTGGGTTCATCTAAAATTAGTATTGAAGATGCGATCAGCAATGC TATTACAGAATGCGATAAGACGATTAAAAACATGGATTGGTTTGAAGTTGTAGACACGCGCGGTCATATCGTTGATGGCA AAGTGGGTCACTTTCAGGTAACCATTAAAATAGGTTTTAGAATAGAACATAGCTAA
Upstream 100 bases:
>100_bases TCGAGTTGGCAAGCTGCTTGCTATTCAACTATAGTTTTATCTAGTTTTGTATAGTTTTGTCTAGTTTTGGCAATGAGTTA TTAAGATACCGGAGGTTAAT
Downstream 100 bases:
>100_bases TTAATGTGAAAGGGCGTTAAGGTTATAAACACGTTATATTCTAATACTATCTCCCCTGACTATCTCACTTAGCCATGTAA CCTGATTATCTAACCTCAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 71; Mature: 70
Protein sequence:
>71_residues MSKHRIYKKIEMVGSSKISIEDAISNAITECDKTIKNMDWFEVVDTRGHIVDGKVGHFQVTIKIGFRIEHS
Sequences:
>Translated_71_residues MSKHRIYKKIEMVGSSKISIEDAISNAITECDKTIKNMDWFEVVDTRGHIVDGKVGHFQVTIKIGFRIEHS >Mature_70_residues SKHRIYKKIEMVGSSKISIEDAISNAITECDKTIKNMDWFEVVDTRGHIVDGKVGHFQVTIKIGFRIEHS
Specific function: Unknown
COG id: COG3360
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8120; Mature: 7988
Theoretical pI: Translated: 8.52; Mature: 8.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKHRIYKKIEMVGSSKISIEDAISNAITECDKTIKNMDWFEVVDTRGHIVDGKVGHFQV CCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEECCCCCEEEE TIKIGFRIEHS EEEEEEEEECC >Mature Secondary Structure SKHRIYKKIEMVGSSKISIEDAISNAITECDKTIKNMDWFEVVDTRGHIVDGKVGHFQV CCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEECCCCCEEEE TIKIGFRIEHS EEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA