Definition | Psychromonas ingrahamii 37, complete genome. |
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Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is 119944762
Identifier: 119944762
GI number: 119944762
Start: 1260756
End: 1261292
Strand: Direct
Name: 119944762
Synonym: Ping_1004
Alternate gene names: NA
Gene position: 1260756-1261292 (Clockwise)
Preceding gene: 119944761
Following gene: 119944763
Centisome position: 27.65
GC content: 39.11
Gene sequence:
>537_bases ATGCGGTGCTTTATTAGAAAACACTTTTACTGGTTTAATTTTATTTGGTTCCAGTTAATGTGGTTTATTGCTGTTTTTTT TACGGTCAGCGGGGAGATTTTTTTAATATTTTCCTTACTGCTGCATTTTTATTTGTCGCCTGATCGTAAATTTGATTTAG CCAGTTTAATCACTATCTCGGCAATTGGGGGAACGGTCGATCTGTTATTATCCTGGCTTGGAATAATGATTTTTCCCGAA GCGGCTCTTTTACCGCTCTGGTTAGTTTTATTATGGGCTCACTTTGCTGTGGCACTCAATCATGGCATGTCTTGGTTGAA TAAAATTCCGCTCTATTTTCAAGTTGTTTTTGGCGGATTATTCGGACCGCTCAGCTATTACGCCGGGTACAAATTCGGGG CGGTTGATTTTCCACTTCCCCCTTTACAGACAGTATTTATATTTATAGTGATCTGGGCAATACTTCTACCGGTATACCTG TCCATATCGCGAAGTTACGGTGATCGTTATGACAAATCTAAACCAAAATATAGCTAA
Upstream 100 bases:
>100_bases TTTTATTTCTGTTATTGCGAAGGTGCCTTCCTGGAAAGAAATATCAGTGCGGTGCATCTGATTGCCGCTAAACCCGCTTT TAGAGCCTGAGGTTTTTAAT
Downstream 100 bases:
>100_bases GAAACGACTTTTATTAGTATTCAGTTTTGCGGCTGTCCTGCTTTTTTCTAACCTGGCATATTCAAATGTGACGGCGCAGC TTAAAACCGTCGGTAAGGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MRCFIRKHFYWFNFIWFQLMWFIAVFFTVSGEIFLIFSLLLHFYLSPDRKFDLASLITISAIGGTVDLLLSWLGIMIFPE AALLPLWLVLLWAHFAVALNHGMSWLNKIPLYFQVVFGGLFGPLSYYAGYKFGAVDFPLPPLQTVFIFIVIWAILLPVYL SISRSYGDRYDKSKPKYS
Sequences:
>Translated_178_residues MRCFIRKHFYWFNFIWFQLMWFIAVFFTVSGEIFLIFSLLLHFYLSPDRKFDLASLITISAIGGTVDLLLSWLGIMIFPE AALLPLWLVLLWAHFAVALNHGMSWLNKIPLYFQVVFGGLFGPLSYYAGYKFGAVDFPLPPLQTVFIFIVIWAILLPVYL SISRSYGDRYDKSKPKYS >Mature_178_residues MRCFIRKHFYWFNFIWFQLMWFIAVFFTVSGEIFLIFSLLLHFYLSPDRKFDLASLITISAIGGTVDLLLSWLGIMIFPE AALLPLWLVLLWAHFAVALNHGMSWLNKIPLYFQVVFGGLFGPLSYYAGYKFGAVDFPLPPLQTVFIFIVIWAILLPVYL SISRSYGDRYDKSKPKYS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20747; Mature: 20747
Theoretical pI: Translated: 9.47; Mature: 9.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRCFIRKHFYWFNFIWFQLMWFIAVFFTVSGEIFLIFSLLLHFYLSPDRKFDLASLITIS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHH AIGGTVDLLLSWLGIMIFPEAALLPLWLVLLWAHFAVALNHGMSWLNKIPLYFQVVFGGL HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH FGPLSYYAGYKFGAVDFPLPPLQTVFIFIVIWAILLPVYLSISRSYGDRYDKSKPKYS HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MRCFIRKHFYWFNFIWFQLMWFIAVFFTVSGEIFLIFSLLLHFYLSPDRKFDLASLITIS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHH AIGGTVDLLLSWLGIMIFPEAALLPLWLVLLWAHFAVALNHGMSWLNKIPLYFQVVFGGL HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH FGPLSYYAGYKFGAVDFPLPPLQTVFIFIVIWAILLPVYLSISRSYGDRYDKSKPKYS HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA