Definition Psychromonas ingrahamii 37, complete genome.
Accession NC_008709
Length 4,559,598

Click here to switch to the map view.

The map label for this gene is 119944752

Identifier: 119944752

GI number: 119944752

Start: 1252014

End: 1252562

Strand: Direct

Name: 119944752

Synonym: Ping_0994

Alternate gene names: NA

Gene position: 1252014-1252562 (Clockwise)

Preceding gene: 119944749

Following gene: 119944753

Centisome position: 27.46

GC content: 39.89

Gene sequence:

>549_bases
ATGAGATTAGCTTTATTTCCACTGCCTGTTTTTTTACTGCCCGAAGGGTTAACAAGGTTACGTATTTTTGAACCACGTTA
TAAGAGGCTAGTAGCAGAGGCTATGTCAACGGGGCAAGGTTTTGGATTATGCCTGCCGAAGGAAGGGCATAATCTCTATG
ATATAGGCATTCGCGTTGAAATATATAATTTTGATCAGGACGAAAATGGTTTTTTAATTATTGATATCAAAGGCACTGAT
AGATTTACATTTGACGATGTAAGCTCAGATTCTGACGGTTTAAGGCATGCTGATGTAACTCTGATAGATGGATGGGAAAG
CATTCAAATGACGCCTCAATATGAGTTTATGCTGGCCCCCTTAAAAGCCGTTTTAACGTCTATACCTTTACATGTGGAAC
AAGTTAATCAACAAGGCTTTAATAATTTGAGCTGGATTTGTCAGCGTTGGTTAGAAATATTACCTGTGCCTGCCGATAAA
AAATACTGGCTTGCTCGGCAAAGCGGCCCAGAGCCTACTGTTGAGTTTATCCGTGAAGTAATTCAGTAG

Upstream 100 bases:

>100_bases
TATTTTGTTTTAGTTACGTGTTTTTATAACCTATTTCGCCATTGAAAGAGATCAAATTGAACGGCTCTCTCGTATCCTTA
GGAATATCAAGGAGAATTAT

Downstream 100 bases:

>100_bases
CTGTTTGTGAATAAAAATTATTATTTAATGATCTAATCTCAAATTTTGACCGTATAGAGTGTCTCATACAGATAAGTTGT
TCTTATAATGTTGGAAGGGT

Product: peptidase S16, lon domain-containing protein

Products: NA

Alternate protein names: ATP-Dependent Protease La; ATP-Dependent Protease La Domain Protein

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MRLALFPLPVFLLPEGLTRLRIFEPRYKRLVAEAMSTGQGFGLCLPKEGHNLYDIGIRVEIYNFDQDENGFLIIDIKGTD
RFTFDDVSSDSDGLRHADVTLIDGWESIQMTPQYEFMLAPLKAVLTSIPLHVEQVNQQGFNNLSWICQRWLEILPVPADK
KYWLARQSGPEPTVEFIREVIQ

Sequences:

>Translated_182_residues
MRLALFPLPVFLLPEGLTRLRIFEPRYKRLVAEAMSTGQGFGLCLPKEGHNLYDIGIRVEIYNFDQDENGFLIIDIKGTD
RFTFDDVSSDSDGLRHADVTLIDGWESIQMTPQYEFMLAPLKAVLTSIPLHVEQVNQQGFNNLSWICQRWLEILPVPADK
KYWLARQSGPEPTVEFIREVIQ
>Mature_182_residues
MRLALFPLPVFLLPEGLTRLRIFEPRYKRLVAEAMSTGQGFGLCLPKEGHNLYDIGIRVEIYNFDQDENGFLIIDIKGTD
RFTFDDVSSDSDGLRHADVTLIDGWESIQMTPQYEFMLAPLKAVLTSIPLHVEQVNQQGFNNLSWICQRWLEILPVPADK
KYWLARQSGPEPTVEFIREVIQ

Specific function: Unknown

COG id: COG2802

COG function: function code R; Uncharacterized protein, similar to the N-terminal domain of Lon protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20941; Mature: 20941

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLALFPLPVFLLPEGLTRLRIFEPRYKRLVAEAMSTGQGFGLCLPKEGHNLYDIGIRVE
CEEEEECCCCEECCCCCCEEEEECHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEEEEEE
IYNFDQDENGFLIIDIKGTDRFTFDDVSSDSDGLRHADVTLIDGWESIQMTPQYEFMLAP
EEECCCCCCCEEEEEECCCCCEEECCCCCCCCCCEECCEEEEECCCCEEECCCHHHHHHH
LKAVLTSIPLHVEQVNQQGFNNLSWICQRWLEILPVPADKKYWLARQSGPEPTVEFIREV
HHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHH
IQ
HC
>Mature Secondary Structure
MRLALFPLPVFLLPEGLTRLRIFEPRYKRLVAEAMSTGQGFGLCLPKEGHNLYDIGIRVE
CEEEEECCCCEECCCCCCEEEEECHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEEEEEE
IYNFDQDENGFLIIDIKGTDRFTFDDVSSDSDGLRHADVTLIDGWESIQMTPQYEFMLAP
EEECCCCCCCEEEEEECCCCCEEECCCCCCCCCCEECCEEEEECCCCEEECCCHHHHHHH
LKAVLTSIPLHVEQVNQQGFNNLSWICQRWLEILPVPADKKYWLARQSGPEPTVEFIREV
HHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHH
IQ
HC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA