| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119944752
Identifier: 119944752
GI number: 119944752
Start: 1252014
End: 1252562
Strand: Direct
Name: 119944752
Synonym: Ping_0994
Alternate gene names: NA
Gene position: 1252014-1252562 (Clockwise)
Preceding gene: 119944749
Following gene: 119944753
Centisome position: 27.46
GC content: 39.89
Gene sequence:
>549_bases ATGAGATTAGCTTTATTTCCACTGCCTGTTTTTTTACTGCCCGAAGGGTTAACAAGGTTACGTATTTTTGAACCACGTTA TAAGAGGCTAGTAGCAGAGGCTATGTCAACGGGGCAAGGTTTTGGATTATGCCTGCCGAAGGAAGGGCATAATCTCTATG ATATAGGCATTCGCGTTGAAATATATAATTTTGATCAGGACGAAAATGGTTTTTTAATTATTGATATCAAAGGCACTGAT AGATTTACATTTGACGATGTAAGCTCAGATTCTGACGGTTTAAGGCATGCTGATGTAACTCTGATAGATGGATGGGAAAG CATTCAAATGACGCCTCAATATGAGTTTATGCTGGCCCCCTTAAAAGCCGTTTTAACGTCTATACCTTTACATGTGGAAC AAGTTAATCAACAAGGCTTTAATAATTTGAGCTGGATTTGTCAGCGTTGGTTAGAAATATTACCTGTGCCTGCCGATAAA AAATACTGGCTTGCTCGGCAAAGCGGCCCAGAGCCTACTGTTGAGTTTATCCGTGAAGTAATTCAGTAG
Upstream 100 bases:
>100_bases TATTTTGTTTTAGTTACGTGTTTTTATAACCTATTTCGCCATTGAAAGAGATCAAATTGAACGGCTCTCTCGTATCCTTA GGAATATCAAGGAGAATTAT
Downstream 100 bases:
>100_bases CTGTTTGTGAATAAAAATTATTATTTAATGATCTAATCTCAAATTTTGACCGTATAGAGTGTCTCATACAGATAAGTTGT TCTTATAATGTTGGAAGGGT
Product: peptidase S16, lon domain-containing protein
Products: NA
Alternate protein names: ATP-Dependent Protease La; ATP-Dependent Protease La Domain Protein
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MRLALFPLPVFLLPEGLTRLRIFEPRYKRLVAEAMSTGQGFGLCLPKEGHNLYDIGIRVEIYNFDQDENGFLIIDIKGTD RFTFDDVSSDSDGLRHADVTLIDGWESIQMTPQYEFMLAPLKAVLTSIPLHVEQVNQQGFNNLSWICQRWLEILPVPADK KYWLARQSGPEPTVEFIREVIQ
Sequences:
>Translated_182_residues MRLALFPLPVFLLPEGLTRLRIFEPRYKRLVAEAMSTGQGFGLCLPKEGHNLYDIGIRVEIYNFDQDENGFLIIDIKGTD RFTFDDVSSDSDGLRHADVTLIDGWESIQMTPQYEFMLAPLKAVLTSIPLHVEQVNQQGFNNLSWICQRWLEILPVPADK KYWLARQSGPEPTVEFIREVIQ >Mature_182_residues MRLALFPLPVFLLPEGLTRLRIFEPRYKRLVAEAMSTGQGFGLCLPKEGHNLYDIGIRVEIYNFDQDENGFLIIDIKGTD RFTFDDVSSDSDGLRHADVTLIDGWESIQMTPQYEFMLAPLKAVLTSIPLHVEQVNQQGFNNLSWICQRWLEILPVPADK KYWLARQSGPEPTVEFIREVIQ
Specific function: Unknown
COG id: COG2802
COG function: function code R; Uncharacterized protein, similar to the N-terminal domain of Lon protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20941; Mature: 20941
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLALFPLPVFLLPEGLTRLRIFEPRYKRLVAEAMSTGQGFGLCLPKEGHNLYDIGIRVE CEEEEECCCCEECCCCCCEEEEECHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEEEEEE IYNFDQDENGFLIIDIKGTDRFTFDDVSSDSDGLRHADVTLIDGWESIQMTPQYEFMLAP EEECCCCCCCEEEEEECCCCCEEECCCCCCCCCCEECCEEEEECCCCEEECCCHHHHHHH LKAVLTSIPLHVEQVNQQGFNNLSWICQRWLEILPVPADKKYWLARQSGPEPTVEFIREV HHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHH IQ HC >Mature Secondary Structure MRLALFPLPVFLLPEGLTRLRIFEPRYKRLVAEAMSTGQGFGLCLPKEGHNLYDIGIRVE CEEEEECCCCEECCCCCCEEEEECHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEEEEEE IYNFDQDENGFLIIDIKGTDRFTFDDVSSDSDGLRHADVTLIDGWESIQMTPQYEFMLAP EEECCCCCCCEEEEEECCCCCEEECCCCCCCCCCEECCEEEEECCCCEEECCCHHHHHHH LKAVLTSIPLHVEQVNQQGFNNLSWICQRWLEILPVPADKKYWLARQSGPEPTVEFIREV HHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHH IQ HC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA