| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is baeS [H]
Identifier: 119944746
GI number: 119944746
Start: 1246048
End: 1247463
Strand: Direct
Name: baeS [H]
Synonym: Ping_0987
Alternate gene names: 119944746
Gene position: 1246048-1247463 (Clockwise)
Preceding gene: 119944742
Following gene: 119944747
Centisome position: 27.33
GC content: 39.76
Gene sequence:
>1416_bases ATGCGTTTAACCCTTTTCCGTAAGTTATTTATCTCGTTGTTGCTGATTAGCTCTATCATGATGGTCGGCATGGCGCTGCT TATTAATAATAGTTTTCAAACCGGATTACAGAACTACCTTAACCACCGGGAAACAGAAGAAATGCAGGTTATTGCTGAAA AAATCAGCCAATATTACTCGCCTGAAAATGGCTGGAGAATGATTGAAGAACAGCCCTATTTATGGACCAATCTTTTAAGA AAAGTAGGAAATCATCCTGCCAGAGAAAGAGCTAATTCGCATAGAGATCGTCCTCCTCAAGAACAATTTTTAATAAACCC GCGCATTTTTCTATTAAATGTACAGGGGGAAGCGGTGCTGGATCGCGCCAGAAAAATGAAAGAGCGCAATGAAAGAGATC AGTTTATTAAAGTGCCCATTATATTGGATGAACAAAATATTGGCTGGATTGCGATTATACAAAAAGAGATTATCACGGGA AAATTAACCAAAATTTTCTTTAAACAGCAATTAAATAATTTTTACTGGATTGCCGCCTGGGCGGCGCTGTTTTCTTTTGT GGTTGCAGCTTTATTAGTGCGACATTTTCTTCAGCCTTTAAAGAATCTTGGCCTTAGTGTAAAGGCCTTACAAAGGGGGG ATTTTAATTATCAAATCCCGGTGAAGGGACAGGATGAGTTAGCTGAATTATCAAAAACTTTTAATCATTTAACCAATACG CTTAAGCTGCAAAAAGTCTCTAGAGAGCAATGGATTGCGGATATCTCCCATGAATTACGCACACCTATTGCCGTTTTAGT CAGTGAAATAGAAGCTATTGAGGATGGTATTCGCAAACCTGAGCCTAAATATATTAAATCATTACATGAGCAGGTAATGA ATCTCAGTCGCCTTGTTGATGATCTTTATCAATTATCACTTTCTGATGCAGGTGTGCTGACTAAAAATACAGAGCGGGTA AATTTAACCCGGTTGTTAGATAATATTGCAAATCAGAATGAATTACGATTAGCTGAAAAAAATATCCACCTGCAGCGTTG TTACGATTCCAGTAAAGCCACTCTGTTGCAGGCTGATCCTAACGCACTATCGCAGCTCATTTTAAATCTTTTTGAAAATA GTTATCGTTATACTGACCCGGATGGACAGCTTAAGCTTACTTTGTCGCAGCGCCTCAATAGGGTTGAATTGATTATCGAA GACAGTGCACCCGCCGTGCCCGATGATGCTCTGCCAAAACTCTTCGAGCGTTTATTTCGCGTTGATAAATCACGCAGCAG AGCCAATGGAGGCTCTGGTTTAGGTTTATCTATTTGCCAAAATATTGTTAAAGCACAGGGTGGGGAGATTGGTGCAGATC ACTCACCTTTAGGCGGCCTTAAAATCAAAATAACCCTCCCTGCCAAGGATATTTAG
Upstream 100 bases:
>100_bases TAAAGAATTTACTTACCATAGGTTAAATCTTTTCAATGCCTCAATAAATATTGAGCGGTATAACACGAAGACTATAAATT AATTACTCAGGATAACCTCA
Downstream 100 bases:
>100_bases AAGATGAATTATCAAGATAAAACGATTCTGATTGTTGAAGATGAACCGGCGCTCGCCAGCGTATTATGTGAGTACTTTAT ACAATCTGGATTTCAAACGC
Product: sensor histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 471; Mature: 471
Protein sequence:
>471_residues MRLTLFRKLFISLLLISSIMMVGMALLINNSFQTGLQNYLNHRETEEMQVIAEKISQYYSPENGWRMIEEQPYLWTNLLR KVGNHPARERANSHRDRPPQEQFLINPRIFLLNVQGEAVLDRARKMKERNERDQFIKVPIILDEQNIGWIAIIQKEIITG KLTKIFFKQQLNNFYWIAAWAALFSFVVAALLVRHFLQPLKNLGLSVKALQRGDFNYQIPVKGQDELAELSKTFNHLTNT LKLQKVSREQWIADISHELRTPIAVLVSEIEAIEDGIRKPEPKYIKSLHEQVMNLSRLVDDLYQLSLSDAGVLTKNTERV NLTRLLDNIANQNELRLAEKNIHLQRCYDSSKATLLQADPNALSQLILNLFENSYRYTDPDGQLKLTLSQRLNRVELIIE DSAPAVPDDALPKLFERLFRVDKSRSRANGGSGLGLSICQNIVKAQGGEIGADHSPLGGLKIKITLPAKDI
Sequences:
>Translated_471_residues MRLTLFRKLFISLLLISSIMMVGMALLINNSFQTGLQNYLNHRETEEMQVIAEKISQYYSPENGWRMIEEQPYLWTNLLR KVGNHPARERANSHRDRPPQEQFLINPRIFLLNVQGEAVLDRARKMKERNERDQFIKVPIILDEQNIGWIAIIQKEIITG KLTKIFFKQQLNNFYWIAAWAALFSFVVAALLVRHFLQPLKNLGLSVKALQRGDFNYQIPVKGQDELAELSKTFNHLTNT LKLQKVSREQWIADISHELRTPIAVLVSEIEAIEDGIRKPEPKYIKSLHEQVMNLSRLVDDLYQLSLSDAGVLTKNTERV NLTRLLDNIANQNELRLAEKNIHLQRCYDSSKATLLQADPNALSQLILNLFENSYRYTDPDGQLKLTLSQRLNRVELIIE DSAPAVPDDALPKLFERLFRVDKSRSRANGGSGLGLSICQNIVKAQGGEIGADHSPLGGLKIKITLPAKDI >Mature_471_residues MRLTLFRKLFISLLLISSIMMVGMALLINNSFQTGLQNYLNHRETEEMQVIAEKISQYYSPENGWRMIEEQPYLWTNLLR KVGNHPARERANSHRDRPPQEQFLINPRIFLLNVQGEAVLDRARKMKERNERDQFIKVPIILDEQNIGWIAIIQKEIITG KLTKIFFKQQLNNFYWIAAWAALFSFVVAALLVRHFLQPLKNLGLSVKALQRGDFNYQIPVKGQDELAELSKTFNHLTNT LKLQKVSREQWIADISHELRTPIAVLVSEIEAIEDGIRKPEPKYIKSLHEQVMNLSRLVDDLYQLSLSDAGVLTKNTERV NLTRLLDNIANQNELRLAEKNIHLQRCYDSSKATLLQADPNALSQLILNLFENSYRYTDPDGQLKLTLSQRLNRVELIIE DSAPAVPDDALPKLFERLFRVDKSRSRANGGSGLGLSICQNIVKAQGGEIGADHSPLGGLKIKITLPAKDI
Specific function: Member of the two-component regulatory system BaeS/BaeR. May activate BaeR by phosphorylation [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1788393, Length=466, Percent_Identity=35.4077253218884, Blast_Score=261, Evalue=7e-71, Organism=Escherichia coli, GI1786783, Length=307, Percent_Identity=26.3843648208469, Blast_Score=113, Evalue=3e-26, Organism=Escherichia coli, GI1790346, Length=248, Percent_Identity=26.6129032258064, Blast_Score=100, Evalue=4e-22, Organism=Escherichia coli, GI1787894, Length=313, Percent_Identity=25.5591054313099, Blast_Score=99, Evalue=8e-22, Organism=Escherichia coli, GI87082128, Length=329, Percent_Identity=26.7477203647416, Blast_Score=95, Evalue=9e-21, Organism=Escherichia coli, GI1786600, Length=231, Percent_Identity=27.7056277056277, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI1786912, Length=224, Percent_Identity=26.7857142857143, Blast_Score=87, Evalue=3e-18, Organism=Escherichia coli, GI1788713, Length=247, Percent_Identity=26.3157894736842, Blast_Score=81, Evalue=1e-16, Organism=Escherichia coli, GI1788279, Length=302, Percent_Identity=27.1523178807947, Blast_Score=80, Evalue=3e-16, Organism=Escherichia coli, GI145693157, Length=251, Percent_Identity=23.1075697211155, Blast_Score=80, Evalue=3e-16, Organism=Escherichia coli, GI1790861, Length=249, Percent_Identity=26.5060240963855, Blast_Score=79, Evalue=6e-16, Organism=Escherichia coli, GI48994928, Length=236, Percent_Identity=24.1525423728814, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1789149, Length=215, Percent_Identity=26.5116279069767, Blast_Score=76, Evalue=4e-15, Organism=Escherichia coli, GI1789403, Length=297, Percent_Identity=27.6094276094276, Blast_Score=76, Evalue=4e-15, Organism=Escherichia coli, GI1787374, Length=293, Percent_Identity=22.8668941979522, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI87081816, Length=267, Percent_Identity=25.4681647940075, Blast_Score=68, Evalue=2e-12, Organism=Escherichia coli, GI1790300, Length=240, Percent_Identity=27.0833333333333, Blast_Score=67, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 53906; Mature: 53906
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLTLFRKLFISLLLISSIMMVGMALLINNSFQTGLQNYLNHRETEEMQVIAEKISQYYS CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC PENGWRMIEEQPYLWTNLLRKVGNHPARERANSHRDRPPQEQFLINPRIFLLNVQGEAVL CCCCCEECCCCCCHHHHHHHHHCCCCHHHHHHCCCCCCCHHHEEECCEEEEEECCCHHHH DRARKMKERNERDQFIKVPIILDEQNIGWIAIIQKEIITGKLTKIFFKQQLNNFYWIAAW HHHHHHHHHCCCCCEEEEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCHHHHHH AALFSFVVAALLVRHFLQPLKNLGLSVKALQRGDFNYQIPVKGQDELAELSKTFNHLTNT HHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHH LKLQKVSREQWIADISHELRTPIAVLVSEIEAIEDGIRKPEPKYIKSLHEQVMNLSRLVD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH DLYQLSLSDAGVLTKNTERVNLTRLLDNIANQNELRLAEKNIHLQRCYDSSKATLLQADP HHHHHHCCCCCCEECCCCHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHCCCCCEEEECCH NALSQLILNLFENSYRYTDPDGQLKLTLSQRLNRVELIIEDSAPAVPDDALPKLFERLFR HHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHCCEEEEEEECCCCCCCCHHHHHHHHHHHH VDKSRSRANGGSGLGLSICQNIVKAQGGEIGADHSPLGGLKIKITLPAKDI HHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCC >Mature Secondary Structure MRLTLFRKLFISLLLISSIMMVGMALLINNSFQTGLQNYLNHRETEEMQVIAEKISQYYS CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC PENGWRMIEEQPYLWTNLLRKVGNHPARERANSHRDRPPQEQFLINPRIFLLNVQGEAVL CCCCCEECCCCCCHHHHHHHHHCCCCHHHHHHCCCCCCCHHHEEECCEEEEEECCCHHHH DRARKMKERNERDQFIKVPIILDEQNIGWIAIIQKEIITGKLTKIFFKQQLNNFYWIAAW HHHHHHHHHCCCCCEEEEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCHHHHHH AALFSFVVAALLVRHFLQPLKNLGLSVKALQRGDFNYQIPVKGQDELAELSKTFNHLTNT HHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHH LKLQKVSREQWIADISHELRTPIAVLVSEIEAIEDGIRKPEPKYIKSLHEQVMNLSRLVD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH DLYQLSLSDAGVLTKNTERVNLTRLLDNIANQNELRLAEKNIHLQRCYDSSKATLLQADP HHHHHHCCCCCCEECCCCHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHCCCCCEEEECCH NALSQLILNLFENSYRYTDPDGQLKLTLSQRLNRVELIIEDSAPAVPDDALPKLFERLFR HHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHCCEEEEEEECCCCCCCCHHHHHHHHHHHH VDKSRSRANGGSGLGLSICQNIVKAQGGEIGADHSPLGGLKIKITLPAKDI HHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8282725; 9097040; 9278503 [H]