| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119944733
Identifier: 119944733
GI number: 119944733
Start: 1222991
End: 1224628
Strand: Direct
Name: 119944733
Synonym: Ping_0974
Alternate gene names: NA
Gene position: 1222991-1224628 (Clockwise)
Preceding gene: 119944732
Following gene: 119944735
Centisome position: 26.82
GC content: 44.14
Gene sequence:
>1638_bases ATGTCGTTATTCTCAATTATTAAAGACTGTGGTGGTATTCATAATATCCAGCGTGTTCTTATCCCTGATTCGCGTATTAT TATTGAGATTCATGAGTTTGAATTGTTATCTGCAGAGGCAAAACAACAAGCTTATAATTTAACTCTAAAGCAGGTGACTT ATCAGCAAACTGTTATTGAAAATAAAGATGAATTTGGGGCGCAACTATTAGAGATTGGCCAGCTAATCAGTGATCAACAG CGGCAGGACATTACGCCTTATACAGCGCCCGTTGAATGTGAGTTTCGTCCCGACTGGCATATCTCGCCCCCACAAGGTTT GTTAAACGATCCGAATGGTTTTATTTATCACCAAGGACAATATCACCTTTTTTATCAGTGGTACCCCTATACTTGTGTAC ACAAAGATAAGTATTGGGCGCATTTAACCAGCAAAGATTTAGTGAACTGGCAGTGGCAACCAGTTGCTTTAACGCCCTCG GACTGGTTTGACAGCTACGGTGTTTTTTCAGGTCACGCGATTAGTCAGGATGATCTGTTAATGTTGTTTTATACCGGCAA TGTGCGTATTGGTGAGCAGCGAGACAGACACACCACCCAATGTTTGGCCACTTCAACGGATGGTATTCACTTTACTAAAC AGGGCCCGGTTGTGCCTGAATTGCCACCGGGGGTGACACCGCATTGCCGCGATCCCAAAGTTATCCGTCATAATGACCGT TGGTTAATGTTGCTGGGTGTACAGCGTGAAGATGAAATTGGCCGTTTAGCGATTTACCACTCGGAGGATCTCAAAACCTG GACATTTATTGCCCTGTGTGGTGACGAGTTGGGTGATTTTGGTTATATGTGGGAATGCCCTGATTTTTTCACCTTAAACC AGCAAGACTTTATTGTTATTGGCCCGCAGGGCATTAGATCGCCTGATAAGAGCCATACCGCCCCGCATCACAACGGTATT GTCAAAGCGCAACTGGAGACAAGCGGCAAAGCCCTGTTATCTGATTTTCAACCTTTAGATTATGGTTTTGATTTTTATGC CCCGCAATCATTAGAGACCCCCGACGGGCGAAGAATTATGTGTGCCTGGATGGGGTTGCCCGATGAAATCGATCATCCGA GCGCCGACAATGGTTGGGTACATCAATTAACCACAATGCGGGAATTATCCTATGACAATGGTGCGTTAATCCAAAAACCC ATTAAAGAGTTGGCAACGCTTCGTCATACGCCGATTGTGCTATCGAAAGATGAAACTTCTTTTGATTTGCACAGTAAAGC ATTTGAGCTGCAAGTTTCAATGCAGTGGGGCAGTGTTTTACGTTTACACCAGTCTGAGTCCGGTTATTGTGAAATTCGTC TAGATTCAGCATCGCGTCGATTATATATTGATCGCAGTAATACCCTGATACGCGAAGGAGATACCGTGCGTGAAATGTCT TTGGCCGAATCTGATTCGGTTCAGCTGCACATATTCTCTGATACTTCGTCATTAGAGGTTTTTATTAATGAGGGGGAAGC GGTAATGTCAGCGCGTGTGTTTACCGATAAGAATTCCACACAGTTGAGCTTCGATGGAGATGTGCAGATACAGGCCTGCT GGTTATTAAATAAAGCAAGCGCTCCCTTCATATCTTAA
Upstream 100 bases:
>100_bases TAAATAAAAAATCATCTTATTGCAAATATGCCTTTATTTTTATATTCTGCAAACGTTCCCATTTATATTTATACTTTTTA TGAATTAATACAGGTGTTAT
Downstream 100 bases:
>100_bases AACACTTAATTTAAATGAGAATTAAAACGAGGATTTAATCATTCACTAAAAGGATTAAATTCTCGTTAAAATGCACCTGG AAAAGTTATTTTAATTTTTT
Product: sucrose-6-phosphate hydrolase
Products: NA
Alternate protein names: Sucrase; Invertase
Number of amino acids: Translated: 545; Mature: 544
Protein sequence:
>545_residues MSLFSIIKDCGGIHNIQRVLIPDSRIIIEIHEFELLSAEAKQQAYNLTLKQVTYQQTVIENKDEFGAQLLEIGQLISDQQ RQDITPYTAPVECEFRPDWHISPPQGLLNDPNGFIYHQGQYHLFYQWYPYTCVHKDKYWAHLTSKDLVNWQWQPVALTPS DWFDSYGVFSGHAISQDDLLMLFYTGNVRIGEQRDRHTTQCLATSTDGIHFTKQGPVVPELPPGVTPHCRDPKVIRHNDR WLMLLGVQREDEIGRLAIYHSEDLKTWTFIALCGDELGDFGYMWECPDFFTLNQQDFIVIGPQGIRSPDKSHTAPHHNGI VKAQLETSGKALLSDFQPLDYGFDFYAPQSLETPDGRRIMCAWMGLPDEIDHPSADNGWVHQLTTMRELSYDNGALIQKP IKELATLRHTPIVLSKDETSFDLHSKAFELQVSMQWGSVLRLHQSESGYCEIRLDSASRRLYIDRSNTLIREGDTVREMS LAESDSVQLHIFSDTSSLEVFINEGEAVMSARVFTDKNSTQLSFDGDVQIQACWLLNKASAPFIS
Sequences:
>Translated_545_residues MSLFSIIKDCGGIHNIQRVLIPDSRIIIEIHEFELLSAEAKQQAYNLTLKQVTYQQTVIENKDEFGAQLLEIGQLISDQQ RQDITPYTAPVECEFRPDWHISPPQGLLNDPNGFIYHQGQYHLFYQWYPYTCVHKDKYWAHLTSKDLVNWQWQPVALTPS DWFDSYGVFSGHAISQDDLLMLFYTGNVRIGEQRDRHTTQCLATSTDGIHFTKQGPVVPELPPGVTPHCRDPKVIRHNDR WLMLLGVQREDEIGRLAIYHSEDLKTWTFIALCGDELGDFGYMWECPDFFTLNQQDFIVIGPQGIRSPDKSHTAPHHNGI VKAQLETSGKALLSDFQPLDYGFDFYAPQSLETPDGRRIMCAWMGLPDEIDHPSADNGWVHQLTTMRELSYDNGALIQKP IKELATLRHTPIVLSKDETSFDLHSKAFELQVSMQWGSVLRLHQSESGYCEIRLDSASRRLYIDRSNTLIREGDTVREMS LAESDSVQLHIFSDTSSLEVFINEGEAVMSARVFTDKNSTQLSFDGDVQIQACWLLNKASAPFIS >Mature_544_residues SLFSIIKDCGGIHNIQRVLIPDSRIIIEIHEFELLSAEAKQQAYNLTLKQVTYQQTVIENKDEFGAQLLEIGQLISDQQR QDITPYTAPVECEFRPDWHISPPQGLLNDPNGFIYHQGQYHLFYQWYPYTCVHKDKYWAHLTSKDLVNWQWQPVALTPSD WFDSYGVFSGHAISQDDLLMLFYTGNVRIGEQRDRHTTQCLATSTDGIHFTKQGPVVPELPPGVTPHCRDPKVIRHNDRW LMLLGVQREDEIGRLAIYHSEDLKTWTFIALCGDELGDFGYMWECPDFFTLNQQDFIVIGPQGIRSPDKSHTAPHHNGIV KAQLETSGKALLSDFQPLDYGFDFYAPQSLETPDGRRIMCAWMGLPDEIDHPSADNGWVHQLTTMRELSYDNGALIQKPI KELATLRHTPIVLSKDETSFDLHSKAFELQVSMQWGSVLRLHQSESGYCEIRLDSASRRLYIDRSNTLIREGDTVREMSL AESDSVQLHIFSDTSSLEVFINEGEAVMSARVFTDKNSTQLSFDGDVQIQACWLLNKASAPFIS
Specific function: Enables the bacterium to metabolize sucrose as a sole carbon source
COG id: COG1621
COG function: function code G; Beta-fructosidases (levanase/invertase)
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 32 family
Homologues:
Organism=Saccharomyces cerevisiae, GI6322029, Length=350, Percent_Identity=27.7142857142857, Blast_Score=99, Evalue=2e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): SCRB_PSYIN (A1STJ9)
Other databases:
- EMBL: CP000510 - RefSeq: YP_942413.1 - ProteinModelPortal: A1STJ9 - SMR: A1STJ9 - STRING: A1STJ9 - GeneID: 4626528 - GenomeReviews: CP000510_GR - KEGG: pin:Ping_0974 - eggNOG: COG1621 - HOGENOM: HBG693902 - OMA: DISSAEI - PhylomeDB: A1STJ9 - ProtClustDB: CLSK788970 - BioCyc: PING357804:PING_0974-MONOMER - GO: GO:0005737 - InterPro: IPR008985 - InterPro: IPR001362 - InterPro: IPR018053 - InterPro: IPR013189 - InterPro: IPR013148 - InterPro: IPR006232 - SMART: SM00640 - TIGRFAMs: TIGR01322
Pfam domain/function: PF08244 Glyco_hydro_32C; PF00251 Glyco_hydro_32N; SSF49899 ConA_like_lec_gl
EC number: =3.2.1.26
Molecular weight: Translated: 62260; Mature: 62129
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: PS00609 GLYCOSYL_HYDROL_F32
Important sites: ACT_SITE 110-110 BINDING 126-126 BINDING 285-285
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLFSIIKDCGGIHNIQRVLIPDSRIIIEIHEFELLSAEAKQQAYNLTLKQVTYQQTVIE CCHHHHHHHCCCCCCEEEEEECCCEEEEEEECEEEECHHHHHHHHEEEEHHEEHHHHHHC NKDEFGAQLLEIGQLISDQQRQDITPYTAPVECEFRPDWHISPPQGLLNDPNGFIYHQGQ CCHHHHHHHHHHHHHHCCCHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEECCC YHLFYQWYPYTCVHKDKYWAHLTSKDLVNWQWQPVALTPSDWFDSYGVFSGHAISQDDLL EEEEEEECCEEEEECCCEEEEECCCCCCCEEEEEEEECCHHHHCCCCCCCCCEECCCCEE MLFYTGNVRIGEQRDRHTTQCLATSTDGIHFTKQGPVVPELPPGVTPHCRDPKVIRHNDR EEEEECCEEECCCCCCCHHEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEECCC WLMLLGVQREDEIGRLAIYHSEDLKTWTFIALCGDELGDFGYMWECPDFFTLNQQDFIVI EEEEEECCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCEEEECCCEEEECCCCEEEE GPQGIRSPDKSHTAPHHNGIVKAQLETSGKALLSDFQPLDYGFDFYAPQSLETPDGRRIM CCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEE CAWMGLPDEIDHPSADNGWVHQLTTMRELSYDNGALIQKPIKELATLRHTPIVLSKDETS EEECCCCHHCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCC FDLHSKAFELQVSMQWGSVLRLHQSESGYCEIRLDSASRRLYIDRSNTLIREGDTVREMS CEECCEEEEEEEEECCCCEEEEECCCCCEEEEEECCCCCEEEEECCCCEEECCCCCEEEC LAESDSVQLHIFSDTSSLEVFINEGEAVMSARVFTDKNSTQLSFDGDVQIQACWLLNKAS CCCCCCEEEEEEECCCCEEEEEECCCEEEEEEEEECCCCCEEEECCCEEEEEEEEEECCC APFIS CCCCC >Mature Secondary Structure SLFSIIKDCGGIHNIQRVLIPDSRIIIEIHEFELLSAEAKQQAYNLTLKQVTYQQTVIE CHHHHHHHCCCCCCEEEEEECCCEEEEEEECEEEECHHHHHHHHEEEEHHEEHHHHHHC NKDEFGAQLLEIGQLISDQQRQDITPYTAPVECEFRPDWHISPPQGLLNDPNGFIYHQGQ CCHHHHHHHHHHHHHHCCCHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEECCC YHLFYQWYPYTCVHKDKYWAHLTSKDLVNWQWQPVALTPSDWFDSYGVFSGHAISQDDLL EEEEEEECCEEEEECCCEEEEECCCCCCCEEEEEEEECCHHHHCCCCCCCCCEECCCCEE MLFYTGNVRIGEQRDRHTTQCLATSTDGIHFTKQGPVVPELPPGVTPHCRDPKVIRHNDR EEEEECCEEECCCCCCCHHEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEECCC WLMLLGVQREDEIGRLAIYHSEDLKTWTFIALCGDELGDFGYMWECPDFFTLNQQDFIVI EEEEEECCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCEEEECCCEEEECCCCEEEE GPQGIRSPDKSHTAPHHNGIVKAQLETSGKALLSDFQPLDYGFDFYAPQSLETPDGRRIM CCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEE CAWMGLPDEIDHPSADNGWVHQLTTMRELSYDNGALIQKPIKELATLRHTPIVLSKDETS EEECCCCHHCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCC FDLHSKAFELQVSMQWGSVLRLHQSESGYCEIRLDSASRRLYIDRSNTLIREGDTVREMS CEECCEEEEEEEEECCCCEEEEECCCCCEEEEEECCCCCEEEEECCCCEEECCCCCEEEC LAESDSVQLHIFSDTSSLEVFINEGEAVMSARVFTDKNSTQLSFDGDVQIQACWLLNKAS CCCCCCEEEEEEECCCCEEEEEECCCEEEEEEEEECCCCCEEEECCCEEEEEEEEEECCC APFIS CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA