| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119944705
Identifier: 119944705
GI number: 119944705
Start: 1177523
End: 1178377
Strand: Reverse
Name: 119944705
Synonym: Ping_0944
Alternate gene names: NA
Gene position: 1178377-1177523 (Counterclockwise)
Preceding gene: 119944706
Following gene: 119944704
Centisome position: 25.84
GC content: 36.96
Gene sequence:
>855_bases TTGAAAAAAATACAGGCAGGCACTGTTGGGATAGGACTTCGTCACCCCCATTATCAGACCCTATTAGATCAATTGCCGAC ATTGGGTTTTCTTGAAGTGCACAGTGAAAACTATTTTAATCCGCACAGTCAAAACCGTTTTTATCTTGAACAAATCGCGG CTCATTACCCTCTTAGCTTTCACGGTATTGGGTTGTCAATCGGCAGCAGCGAAGACATCAGTAAAACACATTTACAAAAC CTTAAACAGATTATTGATATTTTTCAACCAGTATTAGTGTCCGATCACATCAGTTGGAGCTCATTACAAAGCAATTTTTT TAATGATTTATTACCCATCCCTTACACGAAAAAAGCATTGTCATGTTTTGTAAATAACCTCAACCAGACTCAAGAGCACT TACAAAGGCAAATTCTGATAGAAAACCCCTCTTCTTATTTAGAATATAATGACAGTGAAATGAGCGAACCGGAGTTTATC AATGAAATTGTCAAGCAAACTGGCTGTGGCTTGTTATTAGATCTTAATAACGTTTATGTGAGTGCTACTAATCATCAATT TTCAGTGGAAAAGTATCTCGATATCATCGACCATACAACAGTGCAGGAAATTCATTTAGCAGGTTTCACTCAAAAACAGG TTAACAATAGCACTATGCTAATTGATACCCACAGCACCTTAATAAGCCAATCTGTTTGGGATATTTACCAAACATACATG TCGACAAAAAAAACAGATGCGCTGACATTAATAGAGTGGGATCTGGATATCCCCAAACTTGGTACCTTGATAGAAGAGCA TAATAAAGCGATTAATATCAAACAATCGCTTTGCACCAGTGATAAGCATGTATAA
Upstream 100 bases:
>100_bases ATAACTTTTTTATTTGATGCCGAGATTTTTAACTGCCAAATAATATCCAAACCACTTCTAAGCAAGAGGTTTGGATAGAC ATTTTTTAGGATTAAAGACA
Downstream 100 bases:
>100_bases CGATTCTACTAATGCAAAACAACCTTATTTAACGAGATTTCCCCAGAACTTTTAATCGCTTAATAAAATAACTCAGGCAA GAGATTTAAGGAAAATATTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 284; Mature: 284
Protein sequence:
>284_residues MKKIQAGTVGIGLRHPHYQTLLDQLPTLGFLEVHSENYFNPHSQNRFYLEQIAAHYPLSFHGIGLSIGSSEDISKTHLQN LKQIIDIFQPVLVSDHISWSSLQSNFFNDLLPIPYTKKALSCFVNNLNQTQEHLQRQILIENPSSYLEYNDSEMSEPEFI NEIVKQTGCGLLLDLNNVYVSATNHQFSVEKYLDIIDHTTVQEIHLAGFTQKQVNNSTMLIDTHSTLISQSVWDIYQTYM STKKTDALTLIEWDLDIPKLGTLIEEHNKAINIKQSLCTSDKHV
Sequences:
>Translated_284_residues MKKIQAGTVGIGLRHPHYQTLLDQLPTLGFLEVHSENYFNPHSQNRFYLEQIAAHYPLSFHGIGLSIGSSEDISKTHLQN LKQIIDIFQPVLVSDHISWSSLQSNFFNDLLPIPYTKKALSCFVNNLNQTQEHLQRQILIENPSSYLEYNDSEMSEPEFI NEIVKQTGCGLLLDLNNVYVSATNHQFSVEKYLDIIDHTTVQEIHLAGFTQKQVNNSTMLIDTHSTLISQSVWDIYQTYM STKKTDALTLIEWDLDIPKLGTLIEEHNKAINIKQSLCTSDKHV >Mature_284_residues MKKIQAGTVGIGLRHPHYQTLLDQLPTLGFLEVHSENYFNPHSQNRFYLEQIAAHYPLSFHGIGLSIGSSEDISKTHLQN LKQIIDIFQPVLVSDHISWSSLQSNFFNDLLPIPYTKKALSCFVNNLNQTQEHLQRQILIENPSSYLEYNDSEMSEPEFI NEIVKQTGCGLLLDLNNVYVSATNHQFSVEKYLDIIDHTTVQEIHLAGFTQKQVNNSTMLIDTHSTLISQSVWDIYQTYM STKKTDALTLIEWDLDIPKLGTLIEEHNKAINIKQSLCTSDKHV
Specific function: Unknown
COG id: COG3220
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0276 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y944_PSYIN (A1STH1)
Other databases:
- EMBL: CP000510 - RefSeq: YP_942385.1 - ProteinModelPortal: A1STH1 - SMR: A1STH1 - STRING: A1STH1 - GeneID: 4626766 - GenomeReviews: CP000510_GR - KEGG: pin:Ping_0944 - eggNOG: COG3220 - HOGENOM: HBG306331 - OMA: RIPHEAV - BioCyc: PING357804:PING_0944-MONOMER - HAMAP: MF_00697 - InterPro: IPR007801 - InterPro: IPR013022 - Gene3D: G3DSA:3.20.20.150
Pfam domain/function: PF05114 DUF692
EC number: NA
Molecular weight: Translated: 32456; Mature: 32456
Theoretical pI: Translated: 5.80; Mature: 5.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIQAGTVGIGLRHPHYQTLLDQLPTLGFLEVHSENYFNPHSQNRFYLEQIAAHYPLSF CCCCCCCCEEECCCCCHHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCEEE HGIGLSIGSSEDISKTHLQNLKQIIDIFQPVLVSDHISWSSLQSNFFNDLLPIPYTKKAL ECCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHH SCFVNNLNQTQEHLQRQILIENPSSYLEYNDSEMSEPEFINEIVKQTGCGLLLDLNNVYV HHHHHHHHHHHHHHHHHEECCCCHHHHCCCCCCCCCHHHHHHHHHHCCCEEEEEECCEEE SATNHQFSVEKYLDIIDHTTVQEIHLAGFTQKQVNNSTMLIDTHSTLISQSVWDIYQTYM EECCCCCHHHHHHHHHCCCHHHHHHHCCCHHHHCCCCEEEEECHHHHHHHHHHHHHHHHH STKKTDALTLIEWDLDIPKLGTLIEEHNKAINIKQSLCTSDKHV HCCCCCEEEEEEECCCCCHHHHHHHHHCCEEEHHHHHHCCCCCC >Mature Secondary Structure MKKIQAGTVGIGLRHPHYQTLLDQLPTLGFLEVHSENYFNPHSQNRFYLEQIAAHYPLSF CCCCCCCCEEECCCCCHHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCEEE HGIGLSIGSSEDISKTHLQNLKQIIDIFQPVLVSDHISWSSLQSNFFNDLLPIPYTKKAL ECCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHH SCFVNNLNQTQEHLQRQILIENPSSYLEYNDSEMSEPEFINEIVKQTGCGLLLDLNNVYV HHHHHHHHHHHHHHHHHEECCCCHHHHCCCCCCCCCHHHHHHHHHHCCCEEEEEECCEEE SATNHQFSVEKYLDIIDHTTVQEIHLAGFTQKQVNNSTMLIDTHSTLISQSVWDIYQTYM EECCCCCHHHHHHHHHCCCHHHHHHHCCCHHHHCCCCEEEEECHHHHHHHHHHHHHHHHH STKKTDALTLIEWDLDIPKLGTLIEEHNKAINIKQSLCTSDKHV HCCCCCEEEEEEECCCCCHHHHHHHHHCCEEEHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA