Definition Psychromonas ingrahamii 37, complete genome.
Accession NC_008709
Length 4,559,598

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The map label for this gene is 119944704

Identifier: 119944704

GI number: 119944704

Start: 1176694

End: 1177422

Strand: Reverse

Name: 119944704

Synonym: Ping_0943

Alternate gene names: NA

Gene position: 1177422-1176694 (Counterclockwise)

Preceding gene: 119944705

Following gene: 119944703

Centisome position: 25.82

GC content: 41.15

Gene sequence:

>729_bases
ATGACAAAAATTAACTTACTTAATGACGCTATCTCTTTAATACAAAAAACCTTGTGGCTTTCTATCTGCTTAAGTATGAC
GGTTAGTACAGCATCAGCGTCCATCGACTGGCCAACGGCTGGGTGGCCAGTCAAAAAACTAACCCCGGCAGACGATCTAA
GTTATTTAAGCGTATTAGAGAAAAATATAATTTTACACCTTAATATGGCAAGAACAGATCCGAGTCGCTATAGCCAAGAA
TTTATAGCTCCGCGCAGCGCTTTTTACAATAATAAAATGTACTTAAAGCCAGGTGGAGCTGAAAATTTTATCGGACTGAA
AACACAAGAGGGTCTAAGCGCGGCTGATGAAGCAGCTAAAGTAATGAGCAGCACAAAAGCTTTAGGGTCATTAAAAGCAC
ATAAAAAATTAACCTTAGCGGCCCAAGATCATGCCGCTGACCAATCTAAATATGGCGGTATTGGACACGTTAGCCATAAT
GGCTCAACCCTGCAAAATAGAATTGAAAGATATGGAAAATGGCAGCATACAATAGGTGAAAATATTATCTATGGCCCAGA
TTCTGGACGAGAAGTCGTGGTTCAATTATTGATAGATGATGGTGTTAAAAGTCGCGGTCATCGCACTAATATACTGAAAA
ATGATTATAAGGTAGTGGGCGTCGCCTGCGACAAACATCCTTCCTACGGCATTGTGTGCGTGATGGACTTTGCAGGTGGG
ATCGAGTGA

Upstream 100 bases:

>100_bases
CGATTCTACTAATGCAAAACAACCTTATTTAACGAGATTTCCCCAGAACTTTTAATCGCTTAATAAAATAACTCAGGCAA
GAGATTTAAGGAAAATATTT

Downstream 100 bases:

>100_bases
ATCGTTATCTGCATGACTTATATCCCAAAATATATTACAGAGACGCTAAGTATTTTGGCTTTAGTGTCTTTTTAACAATG
TATCTATATCAACGATCTCT

Product: Allergen V5/Tpx-1 family protein

Products: NA

Alternate protein names: Allergen V5/Tpx-1 Family Protein; SCP-Like Extracellular Protein; Allergen V5/TPX-1 Family Protein; Allergen V5/Tpx-1 Related Protein; Allergen V5/Tpx-1 ; Lipoprotein

Number of amino acids: Translated: 242; Mature: 241

Protein sequence:

>242_residues
MTKINLLNDAISLIQKTLWLSICLSMTVSTASASIDWPTAGWPVKKLTPADDLSYLSVLEKNIILHLNMARTDPSRYSQE
FIAPRSAFYNNKMYLKPGGAENFIGLKTQEGLSAADEAAKVMSSTKALGSLKAHKKLTLAAQDHAADQSKYGGIGHVSHN
GSTLQNRIERYGKWQHTIGENIIYGPDSGREVVVQLLIDDGVKSRGHRTNILKNDYKVVGVACDKHPSYGIVCVMDFAGG
IE

Sequences:

>Translated_242_residues
MTKINLLNDAISLIQKTLWLSICLSMTVSTASASIDWPTAGWPVKKLTPADDLSYLSVLEKNIILHLNMARTDPSRYSQE
FIAPRSAFYNNKMYLKPGGAENFIGLKTQEGLSAADEAAKVMSSTKALGSLKAHKKLTLAAQDHAADQSKYGGIGHVSHN
GSTLQNRIERYGKWQHTIGENIIYGPDSGREVVVQLLIDDGVKSRGHRTNILKNDYKVVGVACDKHPSYGIVCVMDFAGG
IE
>Mature_241_residues
TKINLLNDAISLIQKTLWLSICLSMTVSTASASIDWPTAGWPVKKLTPADDLSYLSVLEKNIILHLNMARTDPSRYSQEF
IAPRSAFYNNKMYLKPGGAENFIGLKTQEGLSAADEAAKVMSSTKALGSLKAHKKLTLAAQDHAADQSKYGGIGHVSHNG
STLQNRIERYGKWQHTIGENIIYGPDSGREVVVQLLIDDGVKSRGHRTNILKNDYKVVGVACDKHPSYGIVCVMDFAGGI
E

Specific function: Unknown

COG id: COG2340

COG function: function code S; Uncharacterized protein with SCP/PR1 domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26448; Mature: 26316

Theoretical pI: Translated: 9.02; Mature: 9.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKINLLNDAISLIQKTLWLSICLSMTVSTASASIDWPTAGWPVKKLTPADDLSYLSVLE
CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
KNIILHLNMARTDPSRYSQEFIAPRSAFYNNKMYLKPGGAENFIGLKTQEGLSAADEAAK
CCEEEEEEECCCCHHHHHHHHHCCHHHHHCCEEEECCCCCCCEEECCCCCCCCHHHHHHH
VMSSTKALGSLKAHKKLTLAAQDHAADQSKYGGIGHVSHNGSTLQNRIERYGKWQHTIGE
HHHHHHHHHHHHHHHEEEEEECHHCCCHHHCCCEEEECCCCHHHHHHHHHHCCHHHHHCC
NIIYGPDSGREVVVQLLIDDGVKSRGHRTNILKNDYKVVGVACDKHPSYGIVCVMDFAGG
CEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEECCCC
IE
CC
>Mature Secondary Structure 
TKINLLNDAISLIQKTLWLSICLSMTVSTASASIDWPTAGWPVKKLTPADDLSYLSVLE
CEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
KNIILHLNMARTDPSRYSQEFIAPRSAFYNNKMYLKPGGAENFIGLKTQEGLSAADEAAK
CCEEEEEEECCCCHHHHHHHHHCCHHHHHCCEEEECCCCCCCEEECCCCCCCCHHHHHHH
VMSSTKALGSLKAHKKLTLAAQDHAADQSKYGGIGHVSHNGSTLQNRIERYGKWQHTIGE
HHHHHHHHHHHHHHHEEEEEECHHCCCHHHCCCEEEECCCCHHHHHHHHHHCCHHHHHCC
NIIYGPDSGREVVVQLLIDDGVKSRGHRTNILKNDYKVVGVACDKHPSYGIVCVMDFAGG
CEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEECCCC
IE
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA