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The map label for this gene is yfdV [C]

Identifier: 119944647

GI number: 119944647

Start: 1110837

End: 1111787

Strand: Direct

Name: yfdV [C]

Synonym: Ping_0886

Alternate gene names: 119944647

Gene position: 1110837-1111787 (Clockwise)

Preceding gene: 119944646

Following gene: 119944650

Centisome position: 24.36

GC content: 38.38

Gene sequence:

>951_bases
ATGTTTTTAGAGTCACTTATGTTTTCTTTTTCAGTGACCGGGCCAATCTGTCTGTTACTTTTTCTGGGTTGGTTTCTCAG
GCGAATAGATTTTATTAATGAACAATTCATTTTGATCGGATCAAAATTGGTTTTTACCGTCACTTTACCAACCCTTCTTT
TTCTTAATATTATAAAATCGGATCGTGATGCAGATATTAATTTTTCATTGATTTCTTATTCACTATTGGCGAATATTTTA
TTTTTTTTACTGGCGGTTATTTTAACTAAACTGTTAGCCCGCAATCGGGATGATCATGGGGCTATTATCCAAGGCGCTTT
CCGATCCAATCTAGCTATTATCGGTTTAGCCTATGTTGATAATATTTATGGGGATTCAGGTCTTGCGTTGGCTGCTGTTT
ATGTCGCATTTCATGTTGTTTTATTTAATGTTTTATCGGTGTTAATACTGATGCCTAAACAAGAGAAAATGAGCATTAAG
ATGTGCTTAGGGTTGTTTAAATCAATTTTCAAAAACCCATTAATTATTGGCATTTTGTTGGGTGTTGTATTCTTTTTCTT
CGCCATACCGGTGCCTGATGTGATGCTTGATGCCGGACAATATTTTGCGGGGATGAGCCTGCCAATGGCATTATTATGTA
CAGGTGGTGGACTGCATTTAAAGACCTTAAATTCAGATGGTTTTATTATCGGCTTTGCAACTATTCTAAAAATAATTGTT
GCTCCCGTATTAATCACCGGGGGGGCTTATTTTCTTGGTTTTAGAGGATTCGCGTTAGGGCTGACTTTTTTGATGACCGC
GGCCCCAACGGCTGCTGCAAGTTATGTGATGGCCAGGGCGATGGGCGCTAATGCCAGCTTAGCTGCGAATGTAATAGCTT
CTACGACAGTTGGCTCGCTGGTGACTTACAGTATTGGTCTTTCAATGCTTTATAGTTTCAATTTAATGTAG

Upstream 100 bases:

>100_bases
ATATTCTTGGTCTCTCCCATTGAAATAAAAACAGACATTTCCTCCGATAGCTCAAAATTCAGTCATCTGCTTAAAAATCG
AAAATAATGAAGGATAGTTT

Downstream 100 bases:

>100_bases
CGGGTAAGGAGTCACGGGTAATGAGCCGCGAGTAACGAGTAATAAGTAACAAGCAATGAGTAATGGTTAAAGAGGATGCT
AAGTGCTTTATTTTTTTATC

Product: auxin efflux carrier

Products: NA

Alternate protein names: Permease; Malonate Transporter; Transporter AEC Family; Auxin Efflux Carrier Family Protein; Transporter Auxin Efflux Carrier Family; Membrane Transport Protein Family Transporter; Membrane Transporter; Transporter Auxin Efflux Carrier Family Protein; Efflux Protein; AEC Family Malonate Efflux Carrier; Transporter Of Auxin Efflux Carrier Family; Transmembrane Protein; Membrane Transport Protein Auxin Efflux Carrier; Auxin Efflux Carrier Protein; Permease Transmembrane Protein

Number of amino acids: Translated: 316; Mature: 316

Protein sequence:

>316_residues
MFLESLMFSFSVTGPICLLLFLGWFLRRIDFINEQFILIGSKLVFTVTLPTLLFLNIIKSDRDADINFSLISYSLLANIL
FFLLAVILTKLLARNRDDHGAIIQGAFRSNLAIIGLAYVDNIYGDSGLALAAVYVAFHVVLFNVLSVLILMPKQEKMSIK
MCLGLFKSIFKNPLIIGILLGVVFFFFAIPVPDVMLDAGQYFAGMSLPMALLCTGGGLHLKTLNSDGFIIGFATILKIIV
APVLITGGAYFLGFRGFALGLTFLMTAAPTAAASYVMARAMGANASLAANVIASTTVGSLVTYSIGLSMLYSFNLM

Sequences:

>Translated_316_residues
MFLESLMFSFSVTGPICLLLFLGWFLRRIDFINEQFILIGSKLVFTVTLPTLLFLNIIKSDRDADINFSLISYSLLANIL
FFLLAVILTKLLARNRDDHGAIIQGAFRSNLAIIGLAYVDNIYGDSGLALAAVYVAFHVVLFNVLSVLILMPKQEKMSIK
MCLGLFKSIFKNPLIIGILLGVVFFFFAIPVPDVMLDAGQYFAGMSLPMALLCTGGGLHLKTLNSDGFIIGFATILKIIV
APVLITGGAYFLGFRGFALGLTFLMTAAPTAAASYVMARAMGANASLAANVIASTTVGSLVTYSIGLSMLYSFNLM
>Mature_316_residues
MFLESLMFSFSVTGPICLLLFLGWFLRRIDFINEQFILIGSKLVFTVTLPTLLFLNIIKSDRDADINFSLISYSLLANIL
FFLLAVILTKLLARNRDDHGAIIQGAFRSNLAIIGLAYVDNIYGDSGLALAAVYVAFHVVLFNVLSVLILMPKQEKMSIK
MCLGLFKSIFKNPLIIGILLGVVFFFFAIPVPDVMLDAGQYFAGMSLPMALLCTGGGLHLKTLNSDGFIIGFATILKIIV
APVLITGGAYFLGFRGFALGLTFLMTAAPTAAASYVMARAMGANASLAANVIASTTVGSLVTYSIGLSMLYSFNLM

Specific function: Unknown

COG id: COG0679

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Integral membrane protein (Potential) [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34200; Mature: 34200

Theoretical pI: Translated: 9.05; Mature: 9.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLESLMFSFSVTGPICLLLFLGWFLRRIDFINEQFILIGSKLVFTVTLPTLLFLNIIKS
CCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHC
DRDADINFSLISYSLLANILFFLLAVILTKLLARNRDDHGAIIQGAFRSNLAIIGLAYVD
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHCCCCEEEHHHHH
NIYGDSGLALAAVYVAFHVVLFNVLSVLILMPKQEKMSIKMCLGLFKSIFKNPLIIGILL
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHH
GVVFFFFAIPVPDVMLDAGQYFAGMSLPMALLCTGGGLHLKTLNSDGFIIGFATILKIIV
HHHHHHHHHCCCHHHHHCHHHHHCCCCCHHHEECCCCEEEEEECCCCEEEHHHHHHHHHH
APVLITGGAYFLGFRGFALGLTFLMTAAPTAAASYVMARAMGANASLAANVIASTTVGSL
HHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
VTYSIGLSMLYSFNLM
HHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFLESLMFSFSVTGPICLLLFLGWFLRRIDFINEQFILIGSKLVFTVTLPTLLFLNIIKS
CCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHC
DRDADINFSLISYSLLANILFFLLAVILTKLLARNRDDHGAIIQGAFRSNLAIIGLAYVD
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHCCCCEEEHHHHH
NIYGDSGLALAAVYVAFHVVLFNVLSVLILMPKQEKMSIKMCLGLFKSIFKNPLIIGILL
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHH
GVVFFFFAIPVPDVMLDAGQYFAGMSLPMALLCTGGGLHLKTLNSDGFIIGFATILKIIV
HHHHHHHHHCCCHHHHHCHHHHHCCCCCHHHEECCCCEEEEEECCCCEEEHHHHHHHHHH
APVLITGGAYFLGFRGFALGLTFLMTAAPTAAASYVMARAMGANASLAANVIASTTVGSL
HHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
VTYSIGLSMLYSFNLM
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA