Definition | Psychromonas ingrahamii 37, complete genome. |
---|---|
Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is malP [H]
Identifier: 119944641
GI number: 119944641
Start: 1100853
End: 1103357
Strand: Direct
Name: malP [H]
Synonym: Ping_0880
Alternate gene names: 119944641
Gene position: 1100853-1103357 (Clockwise)
Preceding gene: 119944640
Following gene: 119944642
Centisome position: 24.14
GC content: 39.92
Gene sequence:
>2505_bases ATGACTAAGAAACAGGCAGCAAAAAAAACAATCATTAAAAATAAATCAGCTGAAATAGTGCCAGCCGTAGCCTGCACAAC AAAGCAAATGCGACAAGCTATTCTGGATCGTCTGCATAAAAGTTTAGCGACAGAAGAAAGCAAGGCAAATAACAAAGCGT GGTGGAATGCAACTTGTTACGCTGTGAATGAATTACTTTTTGAAAAATTAACAGATACACAAAAGAGTCACTCAGGGCAT GATACCCGGGCTGTCAATTACCTGTCACTTGAATTTTTGATGGGCCGTCTGCTTTCAAATAACTTACATAACCTGGAATT ATTCAATGTAGCACAGGATGCATTAAAAGGTTTAGGCAAAGACTTATATGAAATTTGCGAGGAAGAGCCGGATATGGCCC TCGGTAATGGGGGACTTGGCCGTTTAGCTGCGTGTTTTATTGATTCTTTAGCAACATTAGGCTACCCGGCAATTGGCTAC GGTATCCATTATGAAAATGGTCTCTTTGCTCAATCATTCCAAGACGGCCGTCAAATTGAACGCCCTGATACATGGCGTGA ATACGGTAATCCTTGGGAAATTTGTCGCCCTGAATCTATTCAGCATGTGCCATTATATGGTTACGTTGAAACCGTTATTG ATGAAAACGGTATCTCACATAAAGTTTGGCATGCGGGTCAAAAACTTAAAGGCGTACCATGGGATGTGCCCATTGTGGGT TATGGTGCTAAAACTGTCAATATTCTACGTTTATGGGAAAGCCGTGCCGATGAAGCATTTGACTGGGATGTCTTTAATGC CGGTGGTTATGTTGATGCGCAAGTTGAAAAATCAAAAGCTGAGACAATCTCAAAAGTATTATACCCAAATGACTCAACAG ATGAAGGGAAAGAATTACGCTTAATTCAACAATACTTTTTCTGTGCATGTTCAGTTAAAGATATTTTACGTCGCTTTAGA CGTGCAGGAAATAAGTGGCCAATATTAGCTGAAAAAGTGGCAATTCAATTAAATGATACCCATCCAACCATCGCCATTCC CGAGTTAATGCGTATTCTGGTTGATGAAGAGCGTCTTGACTGGAATTTTGCATGGTCACTTTGTGAGAAGATTTTTTCTT ACACAAACCATACTTTATTGCCAGAGGCGTTAGAAAAATGGTCCGTCGCATTATTTGAAAAAGTATTACCTCGCCATTTA GAAATTATTTATGAAATTAACCGTCGTTTTCTTGAAACAGTTGAACAAAAATGGCCTGGTGATAACGACATAAAAGCTAA ATTATCTATTGTTGAGGAAGGTTCGCAGCGCATGGTCCGCATGGCTAATTTGTGTGTTGTAACCTCTCACAAAGTTAATG GCGTTGCAGCGGTTCATTCTGAATTGGTGAAAACAGATTTGTTCCCTGAATTTGATCAACTGTACCCGACTAAATTAATT AATGTTACTAACGGTATTACTCCACGTCGTTGGTTAAAAGCTTGTAATCCCGCACTTGCTGCATTATATGATGAAACGGT GGGTAAAGATTGGGTAGTAAATCTTGATAAATTAAAAGATGCATTACCAAAAGCGACTGACACTGTCTTCCAAAAGCGCT TTATGGAGATTAAACGCGACAATAAAGTTGAGTTAGTTAACATCATTAAAGACTTGACCGGTATTGAAGTTTCTGCAGAT GCCATTTTTGACATTCAAATTAAACGTCTGCACGAATACAAACGTCAGCAGTTAAACCTGATTCATATTTTAACCTTGTA CAGGCGTTTATTGGATAATCCAGATTACGATATGGTTCCGCGGGTTTTCTTATTTGGTGCAAAAGCCGCGCCTGGTTACC ATATGGCAAAACAGATCATTTATGCATTGAACAAAGTTGCAGAGAAAGTAAACAGTGATAAACGTATCAAAGGTAAGCTG AAAGTTGTTTTCTTACCAAATTACCGTGTCTCACTTGCTGAAAAAATGTTCCCGGCAGCCGACATATCTGAACAGATTTC AACGGCAGGTTTGGAAGCTTCCGGTACAGGTAACATGAAATTTGCGCTTAATGGTGCCTTAACCGTCGGTACTATGGATG GTGCAAATATTGAAATGGCCGAGGAGATCGGTGCTGAGCACATGTTTATTTTCGGTTTAAGTGTTGCTGAAGTTAAAGAG CTGAAAACAGCGGGTTACAACCCTTACGATTATTATTACAATAATCCTGAGCTGAAAGCGGTGCTTGATTGGTTAGACAC TGATTTCTTTACACCGGGACAGCCGGGCGCGTTATCCGATATCAAACGCAGCTTGCTTGAATACGGTGATGAGTACCTTT GTTTAGCTGATTATGAGTCTTACTGTAAAGCTCACGACGCAATTGATACAACCTACCGAAATAAAGCCTTATGGGCCGAA AAAGCGATTAGAAACTCCGCCGCAATGGGTAAATTTAATTCTGATCGATCCATTGAGGACTATGTAGAAAATGTTTGGCA TTTGAAAAAATACCCGTTAGCGTGA
Upstream 100 bases:
>100_bases TTACTTATAAGAATGGTAGGAATATTATATGCCAACTAAAACGAACAAGAAAAAAAACACAATAAAAGCGGATCTAAAAG CGGCAGTAGAGGAAAAAAAA
Downstream 100 bases:
>100_bases TCTAGAAGCTTAATTAATTAAAAGGCGATATTCTTATATCGCCTTTTTTTTACCTGATTAGAAGGGGAAATAACTAATAT CAACGCCTTTCAAATTTGTT
Product: glycogen/starch/alpha-glucan phosphorylases
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 834; Mature: 833
Protein sequence:
>834_residues MTKKQAAKKTIIKNKSAEIVPAVACTTKQMRQAILDRLHKSLATEESKANNKAWWNATCYAVNELLFEKLTDTQKSHSGH DTRAVNYLSLEFLMGRLLSNNLHNLELFNVAQDALKGLGKDLYEICEEEPDMALGNGGLGRLAACFIDSLATLGYPAIGY GIHYENGLFAQSFQDGRQIERPDTWREYGNPWEICRPESIQHVPLYGYVETVIDENGISHKVWHAGQKLKGVPWDVPIVG YGAKTVNILRLWESRADEAFDWDVFNAGGYVDAQVEKSKAETISKVLYPNDSTDEGKELRLIQQYFFCACSVKDILRRFR RAGNKWPILAEKVAIQLNDTHPTIAIPELMRILVDEERLDWNFAWSLCEKIFSYTNHTLLPEALEKWSVALFEKVLPRHL EIIYEINRRFLETVEQKWPGDNDIKAKLSIVEEGSQRMVRMANLCVVTSHKVNGVAAVHSELVKTDLFPEFDQLYPTKLI NVTNGITPRRWLKACNPALAALYDETVGKDWVVNLDKLKDALPKATDTVFQKRFMEIKRDNKVELVNIIKDLTGIEVSAD AIFDIQIKRLHEYKRQQLNLIHILTLYRRLLDNPDYDMVPRVFLFGAKAAPGYHMAKQIIYALNKVAEKVNSDKRIKGKL KVVFLPNYRVSLAEKMFPAADISEQISTAGLEASGTGNMKFALNGALTVGTMDGANIEMAEEIGAEHMFIFGLSVAEVKE LKTAGYNPYDYYYNNPELKAVLDWLDTDFFTPGQPGALSDIKRSLLEYGDEYLCLADYESYCKAHDAIDTTYRNKALWAE KAIRNSAAMGKFNSDRSIEDYVENVWHLKKYPLA
Sequences:
>Translated_834_residues MTKKQAAKKTIIKNKSAEIVPAVACTTKQMRQAILDRLHKSLATEESKANNKAWWNATCYAVNELLFEKLTDTQKSHSGH DTRAVNYLSLEFLMGRLLSNNLHNLELFNVAQDALKGLGKDLYEICEEEPDMALGNGGLGRLAACFIDSLATLGYPAIGY GIHYENGLFAQSFQDGRQIERPDTWREYGNPWEICRPESIQHVPLYGYVETVIDENGISHKVWHAGQKLKGVPWDVPIVG YGAKTVNILRLWESRADEAFDWDVFNAGGYVDAQVEKSKAETISKVLYPNDSTDEGKELRLIQQYFFCACSVKDILRRFR RAGNKWPILAEKVAIQLNDTHPTIAIPELMRILVDEERLDWNFAWSLCEKIFSYTNHTLLPEALEKWSVALFEKVLPRHL EIIYEINRRFLETVEQKWPGDNDIKAKLSIVEEGSQRMVRMANLCVVTSHKVNGVAAVHSELVKTDLFPEFDQLYPTKLI NVTNGITPRRWLKACNPALAALYDETVGKDWVVNLDKLKDALPKATDTVFQKRFMEIKRDNKVELVNIIKDLTGIEVSAD AIFDIQIKRLHEYKRQQLNLIHILTLYRRLLDNPDYDMVPRVFLFGAKAAPGYHMAKQIIYALNKVAEKVNSDKRIKGKL KVVFLPNYRVSLAEKMFPAADISEQISTAGLEASGTGNMKFALNGALTVGTMDGANIEMAEEIGAEHMFIFGLSVAEVKE LKTAGYNPYDYYYNNPELKAVLDWLDTDFFTPGQPGALSDIKRSLLEYGDEYLCLADYESYCKAHDAIDTTYRNKALWAE KAIRNSAAMGKFNSDRSIEDYVENVWHLKKYPLA >Mature_833_residues TKKQAAKKTIIKNKSAEIVPAVACTTKQMRQAILDRLHKSLATEESKANNKAWWNATCYAVNELLFEKLTDTQKSHSGHD TRAVNYLSLEFLMGRLLSNNLHNLELFNVAQDALKGLGKDLYEICEEEPDMALGNGGLGRLAACFIDSLATLGYPAIGYG IHYENGLFAQSFQDGRQIERPDTWREYGNPWEICRPESIQHVPLYGYVETVIDENGISHKVWHAGQKLKGVPWDVPIVGY GAKTVNILRLWESRADEAFDWDVFNAGGYVDAQVEKSKAETISKVLYPNDSTDEGKELRLIQQYFFCACSVKDILRRFRR AGNKWPILAEKVAIQLNDTHPTIAIPELMRILVDEERLDWNFAWSLCEKIFSYTNHTLLPEALEKWSVALFEKVLPRHLE IIYEINRRFLETVEQKWPGDNDIKAKLSIVEEGSQRMVRMANLCVVTSHKVNGVAAVHSELVKTDLFPEFDQLYPTKLIN VTNGITPRRWLKACNPALAALYDETVGKDWVVNLDKLKDALPKATDTVFQKRFMEIKRDNKVELVNIIKDLTGIEVSADA IFDIQIKRLHEYKRQQLNLIHILTLYRRLLDNPDYDMVPRVFLFGAKAAPGYHMAKQIIYALNKVAEKVNSDKRIKGKLK VVFLPNYRVSLAEKMFPAADISEQISTAGLEASGTGNMKFALNGALTVGTMDGANIEMAEEIGAEHMFIFGLSVAEVKEL KTAGYNPYDYYYNNPELKAVLDWLDTDFFTPGQPGALSDIKRSLLEYGDEYLCLADYESYCKAHDAIDTTYRNKALWAEK AIRNSAAMGKFNSDRSIEDYVENVWHLKKYPLA
Specific function: Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties [
COG id: COG0058
COG function: function code G; Glucan phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycogen phosphorylase family [H]
Homologues:
Organism=Homo sapiens, GI71037379, Length=809, Percent_Identity=48.4548825710754, Blast_Score=753, Evalue=0.0, Organism=Homo sapiens, GI21361370, Length=806, Percent_Identity=48.6352357320099, Blast_Score=753, Evalue=0.0, Organism=Homo sapiens, GI5032009, Length=797, Percent_Identity=48.5570890840652, Blast_Score=751, Evalue=0.0, Organism=Homo sapiens, GI255653002, Length=695, Percent_Identity=50.3597122302158, Blast_Score=718, Evalue=0.0, Organism=Homo sapiens, GI257900462, Length=659, Percent_Identity=49.3171471927162, Blast_Score=666, Evalue=0.0, Organism=Escherichia coli, GI48994936, Length=809, Percent_Identity=50.8034610630408, Blast_Score=805, Evalue=0.0, Organism=Escherichia coli, GI2367228, Length=805, Percent_Identity=45.8385093167702, Blast_Score=738, Evalue=0.0, Organism=Caenorhabditis elegans, GI32566204, Length=813, Percent_Identity=47.7244772447724, Blast_Score=780, Evalue=0.0, Organism=Caenorhabditis elegans, GI17564550, Length=813, Percent_Identity=47.7244772447724, Blast_Score=780, Evalue=0.0, Organism=Saccharomyces cerevisiae, GI6325418, Length=834, Percent_Identity=45.2038369304556, Blast_Score=682, Evalue=0.0, Organism=Drosophila melanogaster, GI78706832, Length=797, Percent_Identity=49.5608531994981, Blast_Score=773, Evalue=0.0, Organism=Drosophila melanogaster, GI24581010, Length=797, Percent_Identity=49.5608531994981, Blast_Score=773, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011833 - InterPro: IPR000811 [H]
Pfam domain/function: PF00343 Phosphorylase [H]
EC number: =2.4.1.1 [H]
Molecular weight: Translated: 94790; Mature: 94659
Theoretical pI: Translated: 6.48; Mature: 6.48
Prosite motif: PS00102 PHOSPHORYLASE ; PS00133 CARBOXYPEPT_ZN_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKKQAAKKTIIKNKSAEIVPAVACTTKQMRQAILDRLHKSLATEESKANNKAWWNATCY CCCHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH AVNELLFEKLTDTQKSHSGHDTRAVNYLSLEFLMGRLLSNNLHNLELFNVAQDALKGLGK HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCH DLYEICEEEPDMALGNGGLGRLAACFIDSLATLGYPAIGYGIHYENGLFAQSFQDGRQIE HHHHHHCCCCCCEECCCCHHHHHHHHHHHHHHCCCCHHCCCEEECCCCCHHHHHCCCCCC RPDTWREYGNPWEICRPESIQHVPLYGYVETVIDENGISHKVWHAGQKLKGVPWDVPIVG CCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCEEE YGAKTVNILRLWESRADEAFDWDVFNAGGYVDAQVEKSKAETISKVLYPNDSTDEGKELR CCCHHHHHHHHHHHCCCCCCCCCEECCCCEEEHHHHHHHHHHHHHHHCCCCCCCCHHHHH LIQQYFFCACSVKDILRRFRRAGNKWPILAEKVAIQLNDTHPTIAIPELMRILVDEERLD HHHHHHHHHCCHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCEEHHHHHHHHHHHHHCC WNFAWSLCEKIFSYTNHTLLPEALEKWSVALFEKVLPRHLEIIYEINRRFLETVEQKWPG HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DNDIKAKLSIVEEGSQRMVRMANLCVVTSHKVNGVAAVHSELVKTDLFPEFDQLYPTKLI CCCCEEHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHCCCCHHHHCCHHHH NVTNGITPRRWLKACNPALAALYDETVGKDWVVNLDKLKDALPKATDTVFQKRFMEIKRD HHCCCCCHHHHHHHCCHHHHHHHHHHCCCCCEEEHHHHHHHCCHHHHHHHHHHHHHHHCC NKVELVNIIKDLTGIEVSADAIFDIQIKRLHEYKRQQLNLIHILTLYRRLLDNPDYDMVP CCHHHHHHHHHHCCCEEECCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH RVFLFGAKAAPGYHMAKQIIYALNKVAEKVNSDKRIKGKLKVVFLPNYRVSLAEKMFPAA HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECEEEEEEECCCHHHHHHHHCCCC DISEQISTAGLEASGTGNMKFALNGALTVGTMDGANIEMAEEIGAEHMFIFGLSVAEVKE CHHHHHHHCCCCCCCCCCEEEEEECEEEEEECCCCCCHHHHHCCCCEEEEEECCHHHHHH LKTAGYNPYDYYYNNPELKAVLDWLDTDFFTPGQPGALSDIKRSLLEYGDEYLCLADYES HHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECHHH YCKAHDAIDTTYRNKALWAEKAIRNSAAMGKFNSDRSIEDYVENVWHLKKYPLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure TKKQAAKKTIIKNKSAEIVPAVACTTKQMRQAILDRLHKSLATEESKANNKAWWNATCY CCHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH AVNELLFEKLTDTQKSHSGHDTRAVNYLSLEFLMGRLLSNNLHNLELFNVAQDALKGLGK HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCH DLYEICEEEPDMALGNGGLGRLAACFIDSLATLGYPAIGYGIHYENGLFAQSFQDGRQIE HHHHHHCCCCCCEECCCCHHHHHHHHHHHHHHCCCCHHCCCEEECCCCCHHHHHCCCCCC RPDTWREYGNPWEICRPESIQHVPLYGYVETVIDENGISHKVWHAGQKLKGVPWDVPIVG CCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCEEE YGAKTVNILRLWESRADEAFDWDVFNAGGYVDAQVEKSKAETISKVLYPNDSTDEGKELR CCCHHHHHHHHHHHCCCCCCCCCEECCCCEEEHHHHHHHHHHHHHHHCCCCCCCCHHHHH LIQQYFFCACSVKDILRRFRRAGNKWPILAEKVAIQLNDTHPTIAIPELMRILVDEERLD HHHHHHHHHCCHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCEEHHHHHHHHHHHHHCC WNFAWSLCEKIFSYTNHTLLPEALEKWSVALFEKVLPRHLEIIYEINRRFLETVEQKWPG HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DNDIKAKLSIVEEGSQRMVRMANLCVVTSHKVNGVAAVHSELVKTDLFPEFDQLYPTKLI CCCCEEHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHCCCCHHHHCCHHHH NVTNGITPRRWLKACNPALAALYDETVGKDWVVNLDKLKDALPKATDTVFQKRFMEIKRD HHCCCCCHHHHHHHCCHHHHHHHHHHCCCCCEEEHHHHHHHCCHHHHHHHHHHHHHHHCC NKVELVNIIKDLTGIEVSADAIFDIQIKRLHEYKRQQLNLIHILTLYRRLLDNPDYDMVP CCHHHHHHHHHHCCCEEECCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH RVFLFGAKAAPGYHMAKQIIYALNKVAEKVNSDKRIKGKLKVVFLPNYRVSLAEKMFPAA HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECEEEEEEECCCHHHHHHHHCCCC DISEQISTAGLEASGTGNMKFALNGALTVGTMDGANIEMAEEIGAEHMFIFGLSVAEVKE CHHHHHHHCCCCCCCCCCEEEEEECEEEEEECCCCCCHHHHHCCCCEEEEEECCHHHHHH LKTAGYNPYDYYYNNPELKAVLDWLDTDFFTPGQPGALSDIKRSLLEYGDEYLCLADYES HHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECHHH YCKAHDAIDTTYRNKALWAEKAIRNSAAMGKFNSDRSIEDYVENVWHLKKYPLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3037809; 9278503; 3155826; 2845225; 6283313; 6339728; 6986282; 9009262; 10220320; 10469642 [H]