| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is cysC [H]
Identifier: 119944563
GI number: 119944563
Start: 1002082
End: 1002714
Strand: Direct
Name: cysC [H]
Synonym: Ping_0800
Alternate gene names: 119944563
Gene position: 1002082-1002714 (Clockwise)
Preceding gene: 119944562
Following gene: 119944564
Centisome position: 21.98
GC content: 44.08
Gene sequence:
>633_bases ATGTCTACCCCCTATAGTAATAAAGAAGTAAATGGCGATAAGTCATCAGATGTTGTTTGGCACGAGGCTGCGGTTTCCCA TGAGGCGCGTGTTAAATTAAATGGTCATAAGCCAGCGGTATTATGGTTTACCGGGTTAAGTGGGTCGGGTAAATCGACTG TTGCGAATGCGGTGGATTATATGCTCCATCAATTGGGCGCGAAAACCTATGTGTTAGATGGTGATAATGTCCGTCATGGT CTAAACGGTGATTTGGGCTTTTCTGATGCAGGGCGTATCGAGAATATTCGCCGTATTGGCGAAGTGTCGAAATTATTTGT TGATGCGGGTTTGCTGGTATCGAGTGCCTTTATTTCGCCTTTTAATGCCGATCGCCAAATGGTGCGTGATTTGCTTGCCG AGGGGGAATTTATTGAAGTGTTTATCGATACTCCGTTAGCCGTTTGTGAACAGCGCGACCCTAAAGGGCTGTATCAAAAA GCGCGTGCCGGTGAGATTAAAAATTTCACCGGAATAGACTCAGCTTATGAAGCACCGGTTAATCCTGAAGTTCATGTAGA AACTGCAGATAAATCTGTAGAAGAATGTGCGCAGCAAGTTGTACAGTATCTAAAACAGCAGGAATATATTTAA
Upstream 100 bases:
>100_bases AATTTTAACCGACAGCTGTCAGCCGCTAGCCGTCATTAGCCGATCGCCGTCATTAGCTGATAGCCGACCGCTGATAGCTG ATAACTAGAAAGAGAATTTT
Downstream 100 bases:
>100_bases AGCTGCTTTCTGCTTTCAGCTGTCGGCCGTCAGCTGATATCCGTCAGCTGATATCTGACAGCTGATATCTGACAGCTGAT ATCTGACAGCTGATATCTGA
Product: adenylyl-sulfate kinase
Products: NA
Alternate protein names: APS kinase; ATP adenosine-5'-phosphosulfate 3'-phosphotransferase; Adenosine-5'-phosphosulfate kinase [H]
Number of amino acids: Translated: 210; Mature: 209
Protein sequence:
>210_residues MSTPYSNKEVNGDKSSDVVWHEAAVSHEARVKLNGHKPAVLWFTGLSGSGKSTVANAVDYMLHQLGAKTYVLDGDNVRHG LNGDLGFSDAGRIENIRRIGEVSKLFVDAGLLVSSAFISPFNADRQMVRDLLAEGEFIEVFIDTPLAVCEQRDPKGLYQK ARAGEIKNFTGIDSAYEAPVNPEVHVETADKSVEECAQQVVQYLKQQEYI
Sequences:
>Translated_210_residues MSTPYSNKEVNGDKSSDVVWHEAAVSHEARVKLNGHKPAVLWFTGLSGSGKSTVANAVDYMLHQLGAKTYVLDGDNVRHG LNGDLGFSDAGRIENIRRIGEVSKLFVDAGLLVSSAFISPFNADRQMVRDLLAEGEFIEVFIDTPLAVCEQRDPKGLYQK ARAGEIKNFTGIDSAYEAPVNPEVHVETADKSVEECAQQVVQYLKQQEYI >Mature_209_residues STPYSNKEVNGDKSSDVVWHEAAVSHEARVKLNGHKPAVLWFTGLSGSGKSTVANAVDYMLHQLGAKTYVLDGDNVRHGL NGDLGFSDAGRIENIRRIGEVSKLFVDAGLLVSSAFISPFNADRQMVRDLLAEGEFIEVFIDTPLAVCEQRDPKGLYQKA RAGEIKNFTGIDSAYEAPVNPEVHVETADKSVEECAQQVVQYLKQQEYI
Specific function: Catalyzes the synthesis of activated sulfate [H]
COG id: COG0529
COG function: function code P; Adenylylsulfate kinase and related kinases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the APS kinase family [H]
Homologues:
Organism=Homo sapiens, GI62912492, Length=216, Percent_Identity=47.6851851851852, Blast_Score=196, Evalue=1e-50, Organism=Homo sapiens, GI34447231, Length=216, Percent_Identity=47.6851851851852, Blast_Score=196, Evalue=1e-50, Organism=Homo sapiens, GI46094058, Length=203, Percent_Identity=48.7684729064039, Blast_Score=193, Evalue=9e-50, Organism=Escherichia coli, GI1789107, Length=194, Percent_Identity=61.8556701030928, Blast_Score=253, Evalue=9e-69, Organism=Caenorhabditis elegans, GI17542422, Length=201, Percent_Identity=48.2587064676617, Blast_Score=194, Evalue=2e-50, Organism=Saccharomyces cerevisiae, GI6322852, Length=198, Percent_Identity=50.5050505050505, Blast_Score=207, Evalue=1e-54, Organism=Drosophila melanogaster, GI24667032, Length=202, Percent_Identity=46.039603960396, Blast_Score=179, Evalue=1e-45, Organism=Drosophila melanogaster, GI24667028, Length=202, Percent_Identity=46.039603960396, Blast_Score=179, Evalue=1e-45, Organism=Drosophila melanogaster, GI24667036, Length=202, Percent_Identity=46.039603960396, Blast_Score=179, Evalue=1e-45, Organism=Drosophila melanogaster, GI24667040, Length=202, Percent_Identity=46.039603960396, Blast_Score=179, Evalue=1e-45, Organism=Drosophila melanogaster, GI116007838, Length=202, Percent_Identity=46.039603960396, Blast_Score=179, Evalue=1e-45, Organism=Drosophila melanogaster, GI24667044, Length=202, Percent_Identity=46.039603960396, Blast_Score=179, Evalue=1e-45,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002891 [H]
Pfam domain/function: PF01583 APS_kinase [H]
EC number: =2.7.1.25 [H]
Molecular weight: Translated: 23072; Mature: 22941
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTPYSNKEVNGDKSSDVVWHEAAVSHEARVKLNGHKPAVLWFTGLSGSGKSTVANAVDY CCCCCCCCCCCCCCCCCEEEHHHHHCCCEEEEECCCCCEEEEEECCCCCCHHHHHHHHHH MLHQLGAKTYVLDGDNVRHGLNGDLGFSDAGRIENIRRIGEVSKLFVDAGLLVSSAFISP HHHHHCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC FNADRQMVRDLLAEGEFIEVFIDTPLAVCEQRDPKGLYQKARAGEIKNFTGIDSAYEAPV CCCCHHHHHHHHCCCCEEEEEECCCHHHHCCCCCHHHHHHHHCCCCCCCCCCCCHHCCCC NPEVHVETADKSVEECAQQVVQYLKQQEYI CCCEEEECHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure STPYSNKEVNGDKSSDVVWHEAAVSHEARVKLNGHKPAVLWFTGLSGSGKSTVANAVDY CCCCCCCCCCCCCCCCEEEHHHHHCCCEEEEECCCCCEEEEEECCCCCCHHHHHHHHHH MLHQLGAKTYVLDGDNVRHGLNGDLGFSDAGRIENIRRIGEVSKLFVDAGLLVSSAFISP HHHHHCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC FNADRQMVRDLLAEGEFIEVFIDTPLAVCEQRDPKGLYQKARAGEIKNFTGIDSAYEAPV CCCCHHHHHHHHCCCCEEEEEECCCHHHHCCCCCHHHHHHHHCCCCCCCCCCCCHHCCCC NPEVHVETADKSVEECAQQVVQYLKQQEYI CCCEEEECHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA