| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is cysN
Identifier: 119944561
GI number: 119944561
Start: 998590
End: 999999
Strand: Direct
Name: cysN
Synonym: Ping_0798
Alternate gene names: 119944561
Gene position: 998590-999999 (Clockwise)
Preceding gene: 119944560
Following gene: 119944562
Centisome position: 21.9
GC content: 41.42
Gene sequence:
>1410_bases ATGTCAAACGATTCAAACTTACTTGCGACTGATATCGAAGAATATCTGCGCGTTCATGAAAATAAAGATCTTATGCGTTT TATCACTTGTGGTAGCGTGGATGATGGTAAATCTACTTTAATTGGTCGCTTGTTATTTGATAGCAAAATGATTTTTGAAG ATCATATGGCGGCTATTGAAAAAGATTCTAAAAAGTTTAATACCACTGATAACGATTTTGATTTGTCGTTACTGGTTGAT GGTCTGCAGTCTGAACGAGAGCAGGGTATTACTATTGATGTGGCTTATCGTTACTTTGCCACGGAACAGCGTAAATTTAT TATTGCTGATACGCCGGGGCATGAGCAATATACCCGTAATATGGTAACAGGTGCGTCGACTTGTGATTTGGCTATTATTT TGATTGATGCACGTTACGGTGTGCAGGTGCAAACGCGTCGTCACTCTTATATCTGTTCGCTATTGGGTATTAAGCATCTG GTTGTTGCGGTCAATAAAATGGATGCCGTTGATTATGATCAGGCTGTTTATAAAAAAATTAAAGCGGATTACCGTGAATT TGCTAAGCAGTTAAATATTGCTGATATCCGTTTTGTGCCTATTTCGGCATTAAAAGGCGATAACGTTGTTAATGAAAGTG AGAATATGACCTGGTACCCGGGTTCACCTTTATTACGTCTGCTGAATACTATTCAAATTGATACTGATATCAACGATAAG TTCCGCCTGGCGGTGCAGTATGTGAATCGCCCGAATTTAGATTTCCGTGGTTTCTGCGGTACGGTGGCGTCGGGTGAAAT TCGGGTTGGCGATACTATTCAGGCATTGCCTTCGGGTAAACAGAGTAAAGTTAAATCTATTGTTACTTTTGATGGTGAGC TGGAAAGCGCTTTTGCAGGCATGGCGATTACTTTGACGCTGGAAGATGAAATTGATATCAGCCGCGGTAATATGATTGTT CGTCCCCATGAAAAACCCACGTCGAGCAAAAACTTTGTTGCCGATTTGGTCTGGATGACTGAAGAAGCATTACATGTTGA CCGTGAATACATTATTAAAGCGGGCGCGCACTCTACTTTTGGTTCGGTTATTTCTATCAATAATAAAGTTGATGTTAATA CCATGGAAAAATGTGAGGCGAATCAACTGGTATTAAATGAAATCGGCAGTTGCAATTTTGAGGTTGCTGAAGCGCTTCAT TTTGACCGTTACAGTGAAAATCGTGCCACGGGCGCTTTTATTATGATTGACCGCCTGACTAATGCAACGGTAGGCGCAGG CATGATTAGCGGCTCGGTTGAAGCCCTTGCTAAAACAGCCCCTGAATACAGCGCCTTTGAAGTCGAATTTAATGCCCTGG TCCGCAAGCATTATCCGCATTGGGAAACCAAGGATATAACAAAGCTGTAA
Upstream 100 bases:
>100_bases ATATCAATGATGATAACCGGTTTGATGAAAGCAGTAGAGTCAAACGAATAGCTTTATCTGACAGCTGAGCGCTGACAGCT AAAAGCTCAAAGGATTTGTT
Downstream 100 bases:
>100_bases GGCTAAAACAAGGCTGTCTGCTGATTATATGGCTGTCGGTTGTCGGCTGTCTGTTTTCAGTCGATAGCTGATGACTGATA GCTGATGACTGATAACTGAT
Product: sulfate adenylyltransferase, large subunit
Products: NA
Alternate protein names: ATP-sulfurylase large subunit; Sulfate adenylate transferase; SAT
Number of amino acids: Translated: 469; Mature: 468
Protein sequence:
>469_residues MSNDSNLLATDIEEYLRVHENKDLMRFITCGSVDDGKSTLIGRLLFDSKMIFEDHMAAIEKDSKKFNTTDNDFDLSLLVD GLQSEREQGITIDVAYRYFATEQRKFIIADTPGHEQYTRNMVTGASTCDLAIILIDARYGVQVQTRRHSYICSLLGIKHL VVAVNKMDAVDYDQAVYKKIKADYREFAKQLNIADIRFVPISALKGDNVVNESENMTWYPGSPLLRLLNTIQIDTDINDK FRLAVQYVNRPNLDFRGFCGTVASGEIRVGDTIQALPSGKQSKVKSIVTFDGELESAFAGMAITLTLEDEIDISRGNMIV RPHEKPTSSKNFVADLVWMTEEALHVDREYIIKAGAHSTFGSVISINNKVDVNTMEKCEANQLVLNEIGSCNFEVAEALH FDRYSENRATGAFIMIDRLTNATVGAGMISGSVEALAKTAPEYSAFEVEFNALVRKHYPHWETKDITKL
Sequences:
>Translated_469_residues MSNDSNLLATDIEEYLRVHENKDLMRFITCGSVDDGKSTLIGRLLFDSKMIFEDHMAAIEKDSKKFNTTDNDFDLSLLVD GLQSEREQGITIDVAYRYFATEQRKFIIADTPGHEQYTRNMVTGASTCDLAIILIDARYGVQVQTRRHSYICSLLGIKHL VVAVNKMDAVDYDQAVYKKIKADYREFAKQLNIADIRFVPISALKGDNVVNESENMTWYPGSPLLRLLNTIQIDTDINDK FRLAVQYVNRPNLDFRGFCGTVASGEIRVGDTIQALPSGKQSKVKSIVTFDGELESAFAGMAITLTLEDEIDISRGNMIV RPHEKPTSSKNFVADLVWMTEEALHVDREYIIKAGAHSTFGSVISINNKVDVNTMEKCEANQLVLNEIGSCNFEVAEALH FDRYSENRATGAFIMIDRLTNATVGAGMISGSVEALAKTAPEYSAFEVEFNALVRKHYPHWETKDITKL >Mature_468_residues SNDSNLLATDIEEYLRVHENKDLMRFITCGSVDDGKSTLIGRLLFDSKMIFEDHMAAIEKDSKKFNTTDNDFDLSLLVDG LQSEREQGITIDVAYRYFATEQRKFIIADTPGHEQYTRNMVTGASTCDLAIILIDARYGVQVQTRRHSYICSLLGIKHLV VAVNKMDAVDYDQAVYKKIKADYREFAKQLNIADIRFVPISALKGDNVVNESENMTWYPGSPLLRLLNTIQIDTDINDKF RLAVQYVNRPNLDFRGFCGTVASGEIRVGDTIQALPSGKQSKVKSIVTFDGELESAFAGMAITLTLEDEIDISRGNMIVR PHEKPTSSKNFVADLVWMTEEALHVDREYIIKAGAHSTFGSVISINNKVDVNTMEKCEANQLVLNEIGSCNFEVAEALHF DRYSENRATGAFIMIDRLTNATVGAGMISGSVEALAKTAPEYSAFEVEFNALVRKHYPHWETKDITKL
Specific function: May be the GTPase, regulating ATP sulfurylase activity
COG id: COG2895
COG function: function code P; GTPases - Sulfate adenylate transferase subunit 1
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP-binding elongation factor family. CysN/nodQ subfamily
Homologues:
Organism=Homo sapiens, GI223555963, Length=432, Percent_Identity=28.4722222222222, Blast_Score=169, Evalue=7e-42, Organism=Homo sapiens, GI5729864, Length=432, Percent_Identity=28.4722222222222, Blast_Score=168, Evalue=9e-42, Organism=Homo sapiens, GI194018520, Length=333, Percent_Identity=30.03003003003, Blast_Score=149, Evalue=5e-36, Organism=Homo sapiens, GI194097354, Length=333, Percent_Identity=30.03003003003, Blast_Score=149, Evalue=6e-36, Organism=Homo sapiens, GI194018522, Length=333, Percent_Identity=30.03003003003, Blast_Score=149, Evalue=6e-36, Organism=Homo sapiens, GI4503475, Length=436, Percent_Identity=27.0642201834862, Blast_Score=149, Evalue=7e-36, Organism=Homo sapiens, GI46094014, Length=334, Percent_Identity=30.2395209580838, Blast_Score=148, Evalue=1e-35, Organism=Homo sapiens, GI4503471, Length=345, Percent_Identity=29.5652173913043, Blast_Score=145, Evalue=7e-35, Organism=Homo sapiens, GI34147630, Length=310, Percent_Identity=29.6774193548387, Blast_Score=96, Evalue=6e-20, Organism=Escherichia coli, GI1789108, Length=458, Percent_Identity=55.8951965065502, Blast_Score=530, Evalue=1e-152, Organism=Escherichia coli, GI2367247, Length=248, Percent_Identity=27.4193548387097, Blast_Score=88, Evalue=9e-19, Organism=Escherichia coli, GI1790412, Length=311, Percent_Identity=25.7234726688103, Blast_Score=76, Evalue=5e-15, Organism=Escherichia coli, GI1789737, Length=311, Percent_Identity=25.7234726688103, Blast_Score=76, Evalue=5e-15, Organism=Caenorhabditis elegans, GI115532067, Length=313, Percent_Identity=30.9904153354633, Blast_Score=154, Evalue=1e-37, Organism=Caenorhabditis elegans, GI115532065, Length=313, Percent_Identity=30.9904153354633, Blast_Score=154, Evalue=1e-37, Organism=Caenorhabditis elegans, GI32566629, Length=433, Percent_Identity=27.9445727482679, Blast_Score=150, Evalue=1e-36, Organism=Caenorhabditis elegans, GI17552884, Length=440, Percent_Identity=27.0454545454545, Blast_Score=141, Evalue=6e-34, Organism=Caenorhabditis elegans, GI17569207, Length=440, Percent_Identity=27.0454545454545, Blast_Score=141, Evalue=6e-34, Organism=Caenorhabditis elegans, GI32566303, Length=433, Percent_Identity=25.8660508083141, Blast_Score=117, Evalue=2e-26, Organism=Caenorhabditis elegans, GI32566301, Length=142, Percent_Identity=33.8028169014084, Blast_Score=88, Evalue=1e-17, Organism=Caenorhabditis elegans, GI25141371, Length=284, Percent_Identity=25.3521126760563, Blast_Score=84, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17556456, Length=326, Percent_Identity=25.7668711656442, Blast_Score=71, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6325337, Length=323, Percent_Identity=30.6501547987616, Blast_Score=155, Evalue=2e-38, Organism=Saccharomyces cerevisiae, GI6319594, Length=323, Percent_Identity=30.6501547987616, Blast_Score=155, Evalue=2e-38, Organism=Saccharomyces cerevisiae, GI6322937, Length=326, Percent_Identity=28.5276073619632, Blast_Score=135, Evalue=1e-32, Organism=Saccharomyces cerevisiae, GI6320377, Length=369, Percent_Identity=29.2682926829268, Blast_Score=124, Evalue=4e-29, Organism=Saccharomyces cerevisiae, GI6324761, Length=345, Percent_Identity=27.2463768115942, Blast_Score=97, Evalue=8e-21, Organism=Drosophila melanogaster, GI45550900, Length=443, Percent_Identity=26.410835214447, Blast_Score=150, Evalue=2e-36, Organism=Drosophila melanogaster, GI24652838, Length=300, Percent_Identity=31.6666666666667, Blast_Score=145, Evalue=5e-35, Organism=Drosophila melanogaster, GI17137572, Length=300, Percent_Identity=31.6666666666667, Blast_Score=145, Evalue=5e-35, Organism=Drosophila melanogaster, GI45553807, Length=300, Percent_Identity=31.6666666666667, Blast_Score=144, Evalue=1e-34, Organism=Drosophila melanogaster, GI45553816, Length=300, Percent_Identity=31.6666666666667, Blast_Score=144, Evalue=1e-34, Organism=Drosophila melanogaster, GI24651721, Length=300, Percent_Identity=31.6666666666667, Blast_Score=144, Evalue=1e-34, Organism=Drosophila melanogaster, GI17864154, Length=300, Percent_Identity=31.6666666666667, Blast_Score=144, Evalue=1e-34, Organism=Drosophila melanogaster, GI17137380, Length=339, Percent_Identity=29.2035398230088, Blast_Score=131, Evalue=1e-30, Organism=Drosophila melanogaster, GI281363316, Length=334, Percent_Identity=28.7425149700599, Blast_Score=100, Evalue=2e-21, Organism=Drosophila melanogaster, GI17864358, Length=334, Percent_Identity=28.7425149700599, Blast_Score=100, Evalue=2e-21, Organism=Drosophila melanogaster, GI19921738, Length=160, Percent_Identity=33.125, Blast_Score=79, Evalue=7e-15, Organism=Drosophila melanogaster, GI19922690, Length=345, Percent_Identity=26.0869565217391, Blast_Score=75, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): CYSN_PSYIN (A1ST27)
Other databases:
- EMBL: CP000510 - RefSeq: YP_942241.1 - ProteinModelPortal: A1ST27 - SMR: A1ST27 - STRING: A1ST27 - GeneID: 4626371 - GenomeReviews: CP000510_GR - KEGG: pin:Ping_0798 - eggNOG: COG2895 - HOGENOM: HBG307581 - OMA: KELFFDP - PhylomeDB: A1ST27 - ProtClustDB: CLSK938180 - BioCyc: PING357804:PING_0798-MONOMER - HAMAP: MF_00062 - InterPro: IPR000795 - InterPro: IPR011779 - InterPro: IPR009001 - InterPro: IPR004161 - InterPro: IPR009000 - PRINTS: PR00315 - TIGRFAMs: TIGR02034
Pfam domain/function: PF00009 GTP_EFTU; PF03144 GTP_EFTU_D2; SSF50465 Elong_init_C; SSF50447 Translat_factor
EC number: =2.7.7.4
Molecular weight: Translated: 52610; Mature: 52479
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: PS00301 EFACTOR_GTP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNDSNLLATDIEEYLRVHENKDLMRFITCGSVDDGKSTLIGRLLFDSKMIFEDHMAAIE CCCCCCEEHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHCCHHHHHHHHHHHH KDSKKFNTTDNDFDLSLLVDGLQSEREQGITIDVAYRYFATEQRKFIIADTPGHEQYTRN CCCCCCCCCCCCEEHHHHHHHHHHHHHCCCEEEEEEEEEECCCCEEEEEECCCCHHHHHH MVTGASTCDLAIILIDARYGVQVQTRRHSYICSLLGIKHLVVAVNKMDAVDYDQAVYKKI HHCCCCCCCEEEEEEECCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH KADYREFAKQLNIADIRFVPISALKGDNVVNESENMTWYPGSPLLRLLNTIQIDTDINDK HHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCEEECCCCHHHHHHHHEEECCCCCCC FRLAVQYVNRPNLDFRGFCGTVASGEIRVGDTIQALPSGKQSKVKSIVTFDGELESAFAG EEEEEEECCCCCCCCCCCCCCCCCCCEEECCCHHHCCCCCHHHEEEEEEECCCHHHHHCC MAITLTLEDEIDISRGNMIVRPHEKPTSSKNFVADLVWMTEEALHVDREYIIKAGAHSTF EEEEEEEECCCEECCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHCCHHHEEECCCCCCC GSVISINNKVDVNTMEKCEANQLVLNEIGSCNFEVAEALHFDRYSENRATGAFIMIDRLT CCEEEECCEECCCHHHHCCCCHHHHHHCCCCCHHHHHHHHHHCCCCCCCCEEEEEEEECC NATVGAGMISGSVEALAKTAPEYSAFEVEFNALVRKHYPHWETKDITKL CCCCCCHHHCCHHHHHHHCCCCCCEEEEEHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure SNDSNLLATDIEEYLRVHENKDLMRFITCGSVDDGKSTLIGRLLFDSKMIFEDHMAAIE CCCCCEEHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHCCHHHHHHHHHHHH KDSKKFNTTDNDFDLSLLVDGLQSEREQGITIDVAYRYFATEQRKFIIADTPGHEQYTRN CCCCCCCCCCCCEEHHHHHHHHHHHHHCCCEEEEEEEEEECCCCEEEEEECCCCHHHHHH MVTGASTCDLAIILIDARYGVQVQTRRHSYICSLLGIKHLVVAVNKMDAVDYDQAVYKKI HHCCCCCCCEEEEEEECCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH KADYREFAKQLNIADIRFVPISALKGDNVVNESENMTWYPGSPLLRLLNTIQIDTDINDK HHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCEEECCCCHHHHHHHHEEECCCCCCC FRLAVQYVNRPNLDFRGFCGTVASGEIRVGDTIQALPSGKQSKVKSIVTFDGELESAFAG EEEEEEECCCCCCCCCCCCCCCCCCCEEECCCHHHCCCCCHHHEEEEEEECCCHHHHHCC MAITLTLEDEIDISRGNMIVRPHEKPTSSKNFVADLVWMTEEALHVDREYIIKAGAHSTF EEEEEEEECCCEECCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHCCHHHEEECCCCCCC GSVISINNKVDVNTMEKCEANQLVLNEIGSCNFEVAEALHFDRYSENRATGAFIMIDRLT CCEEEECCEECCCHHHHCCCCHHHHHHCCCCCHHHHHHHHHHCCCCCCCCEEEEEEEECC NATVGAGMISGSVEALAKTAPEYSAFEVEFNALVRKHYPHWETKDITKL CCCCCCHHHCCHHHHHHHCCCCCCEEEEEHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA