| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is manC [H]
Identifier: 119944533
GI number: 119944533
Start: 964172
End: 965623
Strand: Direct
Name: manC [H]
Synonym: Ping_0766
Alternate gene names: 119944533
Gene position: 964172-965623 (Clockwise)
Preceding gene: 119944532
Following gene: 119944534
Centisome position: 21.15
GC content: 42.15
Gene sequence:
>1452_bases ATGATCTCTCCTGTTATTCTGGCCGGTGGTACTGGTAGTCGATTATGGCCACTTTCTCGTGAGCTTTACCCAAAACAGTT TTTAACCGTAACAGGTGAGCAATCAATGTTGCAGCAGACCGTTGCGCGTTTATCTGGTATGGAGCATGCCGCACCTGTAT TAATTTGTAATGAAGATCACCGTTTTATTGCTGCTGAGCAAATGCGTTTAGGCGGTTATGATCATAGCGGTATTATCTTG GAGCCTGTTGGCAGAAATACAGCGCCTGCTATTGCATTGGCTGCGCTACGAGCGGTTAACAATGCAGTTGATGGCGAAGA GCCTGTTTTATTAATACTTGCTGCTGATCATATCATTGAAAATGAAGAGGCTTTTAAAACTTCAGTAGCAAAAGCATTAC TTCTTGCAGAAAATGGCCAACTGGTTACTTTTGGTATCGTTCCTACTGCGCCTGAAACGGGTTATGGTTATATAAAAAGA GGGACGAACTGCGAGGGGCTAGATACGAATGGCAGTCATGATGCTTTCTCTGTTAGTGAATTTGTAGAAAAACCAGACTT GGCTACTGCAGAAGAGTATTTGGCAAGTGGGAACTACTACTGGAACTCAGGTATGTTCCTGTTCAAAGCAAGTCGTTACC TTGAAGAATTAGCCAAATTTTCACCCATTATATTGGACGTGTGCAAGCGTGCTATTGCTGCACCATCACAAGACTTAGAT TTTATTCGTGTTGACAAAGCTATCTTTGCAACCTGTCCAAATGACTCTATCGATTATTCGGTGATGGAGCCTCTTTGTGC ACAGGGAAGCAATTCGGTGATGGTTGTGCCTATGGATGCTGGTTGGAGCGATGTGGGCTCTTTTTCTGCGTTATGGGAAG TCTCAGCTAAAGATGATAACCAAAATGCCATAAAAGGTGATGTAATGGTCGTTGATTCAACCAACAATTATATCTATGCA GAACATAAATTGGTCTCTACGGTCGGTGTTGATAACTTAGTGATTATTGAAACTAAAGATGCCATTTTAGTGGCAAGCAA AGATAAAGTGCAAGATGTTAAAACGATTGTTAACCAGCTAAAAGAAGCAGGCCGAACTGAACATAAACTACACCGTGAAG TATATCGTCCCTGGGGTAAATACGACTCTATCGATTTTGGTAAAAGGGATCATGTAAAACGAATTACCGTTAAACCGGGT GAAAAACTTTCAATTCAAAAACATCACCACCGCTCGGAGCATTGGATTGTGGTATCTGGCACCGCAAGCGTGTTAAATGG TGATAAAACTATTTTAGTCACTGAAAATGAATCAACCTACATCCCGTTAGGTACCATTCATGCGTTGGAAAATCCCGGCA AAATCCTGTTAGAGATGATTGAAGTGCAGACAGGCAGTTATCTTGGTGAAGATGATATAGTGCGCTTCGAAGATCGCTAC GGCCGAGTCTAA
Upstream 100 bases:
>100_bases GATAAACAAGCAGATTTACTATTTAAATAATTAATGAGTTCTTAATGCTTTGAGCTTCATTATTGACTCGGAACTTGAAA CTGAAACTGGAAAATAATTT
Downstream 100 bases:
>100_bases TAAGTAAAAGCTTAACTATAGAGAAAATGGTTAAAGATAAAGTTCAGGGCAAGATTACGAATATAGACTTTTATTTTGAT TATTAATTGCTTTTTATTTT
Product: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase
Products: NA
Alternate protein names: GDP-mannose pyrophosphorylase; GMP; GMPP [H]
Number of amino acids: Translated: 483; Mature: 483
Protein sequence:
>483_residues MISPVILAGGTGSRLWPLSRELYPKQFLTVTGEQSMLQQTVARLSGMEHAAPVLICNEDHRFIAAEQMRLGGYDHSGIIL EPVGRNTAPAIALAALRAVNNAVDGEEPVLLILAADHIIENEEAFKTSVAKALLLAENGQLVTFGIVPTAPETGYGYIKR GTNCEGLDTNGSHDAFSVSEFVEKPDLATAEEYLASGNYYWNSGMFLFKASRYLEELAKFSPIILDVCKRAIAAPSQDLD FIRVDKAIFATCPNDSIDYSVMEPLCAQGSNSVMVVPMDAGWSDVGSFSALWEVSAKDDNQNAIKGDVMVVDSTNNYIYA EHKLVSTVGVDNLVIIETKDAILVASKDKVQDVKTIVNQLKEAGRTEHKLHREVYRPWGKYDSIDFGKRDHVKRITVKPG EKLSIQKHHHRSEHWIVVSGTASVLNGDKTILVTENESTYIPLGTIHALENPGKILLEMIEVQTGSYLGEDDIVRFEDRY GRV
Sequences:
>Translated_483_residues MISPVILAGGTGSRLWPLSRELYPKQFLTVTGEQSMLQQTVARLSGMEHAAPVLICNEDHRFIAAEQMRLGGYDHSGIIL EPVGRNTAPAIALAALRAVNNAVDGEEPVLLILAADHIIENEEAFKTSVAKALLLAENGQLVTFGIVPTAPETGYGYIKR GTNCEGLDTNGSHDAFSVSEFVEKPDLATAEEYLASGNYYWNSGMFLFKASRYLEELAKFSPIILDVCKRAIAAPSQDLD FIRVDKAIFATCPNDSIDYSVMEPLCAQGSNSVMVVPMDAGWSDVGSFSALWEVSAKDDNQNAIKGDVMVVDSTNNYIYA EHKLVSTVGVDNLVIIETKDAILVASKDKVQDVKTIVNQLKEAGRTEHKLHREVYRPWGKYDSIDFGKRDHVKRITVKPG EKLSIQKHHHRSEHWIVVSGTASVLNGDKTILVTENESTYIPLGTIHALENPGKILLEMIEVQTGSYLGEDDIVRFEDRY GRV >Mature_483_residues MISPVILAGGTGSRLWPLSRELYPKQFLTVTGEQSMLQQTVARLSGMEHAAPVLICNEDHRFIAAEQMRLGGYDHSGIIL EPVGRNTAPAIALAALRAVNNAVDGEEPVLLILAADHIIENEEAFKTSVAKALLLAENGQLVTFGIVPTAPETGYGYIKR GTNCEGLDTNGSHDAFSVSEFVEKPDLATAEEYLASGNYYWNSGMFLFKASRYLEELAKFSPIILDVCKRAIAAPSQDLD FIRVDKAIFATCPNDSIDYSVMEPLCAQGSNSVMVVPMDAGWSDVGSFSALWEVSAKDDNQNAIKGDVMVVDSTNNYIYA EHKLVSTVGVDNLVIIETKDAILVASKDKVQDVKTIVNQLKEAGRTEHKLHREVYRPWGKYDSIDFGKRDHVKRITVKPG EKLSIQKHHHRSEHWIVVSGTASVLNGDKTILVTENESTYIPLGTIHALENPGKILLEMIEVQTGSYLGEDDIVRFEDRY GRV
Specific function: Involved in GDP-mannose biosynthesis which serves as the activated sugar nucleotide precursor for mannose residues in cell surface polysaccharides. This enzyme participates in synthesis of the LPS O antigen [H]
COG id: COG0836
COG function: function code M; Mannose-1-phosphate guanylyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mannose-6-phosphate isomerase type 2 family [H]
Homologues:
Organism=Escherichia coli, GI1788362, Length=485, Percent_Identity=60.2061855670103, Blast_Score=580, Evalue=1e-166,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR018247 - InterPro: IPR006375 - InterPro: IPR001538 - InterPro: IPR005835 - InterPro: IPR014710 [H]
Pfam domain/function: PF01050 MannoseP_isomer; PF00483 NTP_transferase [H]
EC number: =2.7.7.13 [H]
Molecular weight: Translated: 53166; Mature: 53166
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISPVILAGGTGSRLWPLSRELYPKQFLTVTGEQSMLQQTVARLSGMEHAAPVLICNEDH CCCCEEEECCCCCCCCCCCHHCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCEEEECCCC RFIAAEQMRLGGYDHSGIILEPVGRNTAPAIALAALRAVNNAVDGEEPVLLILAADHIIE CEEEEEHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECHHHC NEEAFKTSVAKALLLAENGQLVTFGIVPTAPETGYGYIKRGTNCEGLDTNGSHDAFSVSE CHHHHHHHHHHHHEEECCCCEEEEEEEECCCCCCCCEEECCCCCCCCCCCCCCCCEEHHH FVEKPDLATAEEYLASGNYYWNSGMFLFKASRYLEELAKFSPIILDVCKRAIAAPSQDLD HHCCCCCCCHHHHHHCCCEEECCCEEEEHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCC FIRVDKAIFATCPNDSIDYSVMEPLCAQGSNSVMVVPMDAGWSDVGSFSALWEVSAKDDN EEEECCEEEEECCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEEEEECCCCC QNAIKGDVMVVDSTNNYIYAEHKLVSTVGVDNLVIIETKDAILVASKDKVQDVKTIVNQL CCCEECCEEEEECCCCEEEEEEEEEEECCCCCEEEEEECCEEEEECCHHHHHHHHHHHHH KEAGRTEHKLHREVYRPWGKYDSIDFGKRDHVKRITVKPGEKLSIQKHHHRSEHWIVVSG HHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCEEEHHHCCCCCCEEEEEC TASVLNGDKTILVTENESTYIPLGTIHALENPGKILLEMIEVQTGSYLGEDDIVRFEDRY CHHHCCCCEEEEEECCCCCEEEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCEEEEHHHC GRV CCC >Mature Secondary Structure MISPVILAGGTGSRLWPLSRELYPKQFLTVTGEQSMLQQTVARLSGMEHAAPVLICNEDH CCCCEEEECCCCCCCCCCCHHCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCEEEECCCC RFIAAEQMRLGGYDHSGIILEPVGRNTAPAIALAALRAVNNAVDGEEPVLLILAADHIIE CEEEEEHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECHHHC NEEAFKTSVAKALLLAENGQLVTFGIVPTAPETGYGYIKRGTNCEGLDTNGSHDAFSVSE CHHHHHHHHHHHHEEECCCCEEEEEEEECCCCCCCCEEECCCCCCCCCCCCCCCCEEHHH FVEKPDLATAEEYLASGNYYWNSGMFLFKASRYLEELAKFSPIILDVCKRAIAAPSQDLD HHCCCCCCCHHHHHHCCCEEECCCEEEEHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCC FIRVDKAIFATCPNDSIDYSVMEPLCAQGSNSVMVVPMDAGWSDVGSFSALWEVSAKDDN EEEECCEEEEECCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEEEEEEECCCCC QNAIKGDVMVVDSTNNYIYAEHKLVSTVGVDNLVIIETKDAILVASKDKVQDVKTIVNQL CCCEECCEEEEECCCCEEEEEEEEEEECCCCCEEEEEECCEEEEECCHHHHHHHHHHHHH KEAGRTEHKLHREVYRPWGKYDSIDFGKRDHVKRITVKPGEKLSIQKHHHRSEHWIVVSG HHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCEEEHHHCCCCCCEEEEEC TASVLNGDKTILVTENESTYIPLGTIHALENPGKILLEMIEVQTGSYLGEDDIVRFEDRY CHHHCCCCEEEEEECCCCCEEEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCEEEEHHHC GRV CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1383393 [H]