| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119944529
Identifier: 119944529
GI number: 119944529
Start: 958537
End: 959712
Strand: Direct
Name: 119944529
Synonym: Ping_0762
Alternate gene names: NA
Gene position: 958537-959712 (Clockwise)
Preceding gene: 124021678
Following gene: 119944530
Centisome position: 21.02
GC content: 40.22
Gene sequence:
>1176_bases ATGGAAACCGATGATGTTTATCTGCGTAGCGATTTACAATTATTAGCCGATGCCGGCATTGTTACTGTGCCTGTTAACAG CTTTCCTTTGCCGTGGCGGGAAATATCGGTACAAATAAAAAATACTTCACCATCGGCGCTTGCTGAAAATACCCGTCAGG CTTATTACCATATATCTTACAAAATTAACGCGGCTAAAAAAGGCTATGGTAATCGTTTTCTAAAACTGAAAACCGCGCAA AAAGGGTTGCCAAGCAGTTTTGGTCAAAATAACGACGTTAAGTGGGGCGCTTTTTCAAATGTTGGCATTGATGAATCCCG TTTCTCAATGCGGATCAGTGCAAATTACGCGCAGTATCATGATAAAGAAGAGGCGCAATTTAATTTCGATAACAGCTATT TTGCGGTCACTACAGGTAAAACAAACTTCTTTATTAATACCCAAGCACAGTGGTGGAGTCCAAGCTGGCTGGAGTCGATA AGTGCAGAGCAGCGTGTTCATCCTGCTTATGAATTAGGGCTAGAAAGAACCTTTGTTGATTTGCCTTTATTAGGCAGTGT TTATTTTAAAACCGGCTTAAATCAATTGCGATCCAGCGATGACTGGAAATATTCATGGCGCTCTCGTTTATCACTACGGC CGGTAAATGCACTTGAACTGTCATTCAGTTACTTTGATTTTCAAGAAGCGCAAAACAAAGATGCTCAGGATAACTATCAG CAATTAAGTATGGATGGACGCTTAAGTCTACAGTCAATGATAGATATTCCGCTGGCTGTTTATATGCAGCATATTATTGA TGATTCGCAGCCGGATTTTTCAGCCTTCTTAATAGGAAGTGATTATAGTGTGCTGGCTGCGGGTATGCAGATGCGCTTTG TCTTTGAGTATCGTAATACGAAAGATGATTATTTAGGTGAAACGTTAGATAAAAAACGTTATTCAGTGGGAAGTGTTGTA CAGATGGCCAATGATCATCAATGGCAGTTGTTTTTGCACCATAACAGCAGTGATAACAGCATAGATAGCAGCATAAATAA CCCTGGAAATCAGTTAGTGGGTTCTTATCGCTTTCTGATTTATAAAGGTATGCTATCTTTGTCGCTTTCATCATCGGATA CACAAGAAAACAGTGACAAAGTAAATGCCGGGCTGTCGTGGGAATTGCATTTTTAA
Upstream 100 bases:
>100_bases ATGGTTATAGCCAGTGTGTAATTTTAATCAAAGCATCTCGCGCACCGCTTTTTTCAGCGTTTTATTATTCATTTGTCTGC AAGTTCAAGCAAGCCCATGG
Downstream 100 bases:
>100_bases TTGGACGGACTTGTTTAAGAGTTTATTTTTTGGGCCAAAGTGGCTTTAATTTTTTTTACATATAGGTAACGAGTGAAAAA TGTTTAATTTATGTCTATTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 391; Mature: 391
Protein sequence:
>391_residues METDDVYLRSDLQLLADAGIVTVPVNSFPLPWREISVQIKNTSPSALAENTRQAYYHISYKINAAKKGYGNRFLKLKTAQ KGLPSSFGQNNDVKWGAFSNVGIDESRFSMRISANYAQYHDKEEAQFNFDNSYFAVTTGKTNFFINTQAQWWSPSWLESI SAEQRVHPAYELGLERTFVDLPLLGSVYFKTGLNQLRSSDDWKYSWRSRLSLRPVNALELSFSYFDFQEAQNKDAQDNYQ QLSMDGRLSLQSMIDIPLAVYMQHIIDDSQPDFSAFLIGSDYSVLAAGMQMRFVFEYRNTKDDYLGETLDKKRYSVGSVV QMANDHQWQLFLHHNSSDNSIDSSINNPGNQLVGSYRFLIYKGMLSLSLSSSDTQENSDKVNAGLSWELHF
Sequences:
>Translated_391_residues METDDVYLRSDLQLLADAGIVTVPVNSFPLPWREISVQIKNTSPSALAENTRQAYYHISYKINAAKKGYGNRFLKLKTAQ KGLPSSFGQNNDVKWGAFSNVGIDESRFSMRISANYAQYHDKEEAQFNFDNSYFAVTTGKTNFFINTQAQWWSPSWLESI SAEQRVHPAYELGLERTFVDLPLLGSVYFKTGLNQLRSSDDWKYSWRSRLSLRPVNALELSFSYFDFQEAQNKDAQDNYQ QLSMDGRLSLQSMIDIPLAVYMQHIIDDSQPDFSAFLIGSDYSVLAAGMQMRFVFEYRNTKDDYLGETLDKKRYSVGSVV QMANDHQWQLFLHHNSSDNSIDSSINNPGNQLVGSYRFLIYKGMLSLSLSSSDTQENSDKVNAGLSWELHF >Mature_391_residues METDDVYLRSDLQLLADAGIVTVPVNSFPLPWREISVQIKNTSPSALAENTRQAYYHISYKINAAKKGYGNRFLKLKTAQ KGLPSSFGQNNDVKWGAFSNVGIDESRFSMRISANYAQYHDKEEAQFNFDNSYFAVTTGKTNFFINTQAQWWSPSWLESI SAEQRVHPAYELGLERTFVDLPLLGSVYFKTGLNQLRSSDDWKYSWRSRLSLRPVNALELSFSYFDFQEAQNKDAQDNYQ QLSMDGRLSLQSMIDIPLAVYMQHIIDDSQPDFSAFLIGSDYSVLAAGMQMRFVFEYRNTKDDYLGETLDKKRYSVGSVV QMANDHQWQLFLHHNSSDNSIDSSINNPGNQLVGSYRFLIYKGMLSLSLSSSDTQENSDKVNAGLSWELHF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44692; Mature: 44692
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METDDVYLRSDLQLLADAGIVTVPVNSFPLPWREISVQIKNTSPSALAENTRQAYYHISY CCCCCEEECCCHHHHHCCCEEEEECCCCCCCHHHEEEEEECCCCHHHHHCCCEEEEEEEE KINAAKKGYGNRFLKLKTAQKGLPSSFGQNNDVKWGAFSNVGIDESRFSMRISANYAQYH EEECCCCCCCCEEEEEEECCCCCCCCCCCCCCEEECCCCCCCCCCCCEEEEEECCHHHHC DKEEAQFNFDNSYFAVTTGKTNFFINTQAQWWSPSWLESISAEQRVHPAYELGLERTFVD CCCCCEEECCCCEEEEEECCEEEEEECCCCCCCCHHHHHCCHHHHCCHHHHHCCCCEEEC LPLLGSVYFKTGLNQLRSSDDWKYSWRSRLSLRPVNALELSFSYFDFQEAQNKDAQDNYQ CCCHHHHHHHHHHHHHCCCCCCEEHHHCCCCCCCCCEEEEEEEEECHHHHCCCCCCCHHH QLSMDGRLSLQSMIDIPLAVYMQHIIDDSQPDFSAFLIGSDYSVLAAGMQMRFVFEYRNT HCCCCCCEEHHHHHCCCHHHHHHHHHCCCCCCCEEEEECCCHHHHHCCEEEEEEEEECCC KDDYLGETLDKKRYSVGSVVQMANDHQWQLFLHHNSSDNSIDSSINNPGNQLVGSYRFLI CHHHHHHHHHHHHCCHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHEE YKGMLSLSLSSSDTQENSDKVNAGLSWELHF EECHHEEEECCCCCCCCCCCCCCCEEEEEEC >Mature Secondary Structure METDDVYLRSDLQLLADAGIVTVPVNSFPLPWREISVQIKNTSPSALAENTRQAYYHISY CCCCCEEECCCHHHHHCCCEEEEECCCCCCCHHHEEEEEECCCCHHHHHCCCEEEEEEEE KINAAKKGYGNRFLKLKTAQKGLPSSFGQNNDVKWGAFSNVGIDESRFSMRISANYAQYH EEECCCCCCCCEEEEEEECCCCCCCCCCCCCCEEECCCCCCCCCCCCEEEEEECCHHHHC DKEEAQFNFDNSYFAVTTGKTNFFINTQAQWWSPSWLESISAEQRVHPAYELGLERTFVD CCCCCEEECCCCEEEEEECCEEEEEECCCCCCCCHHHHHCCHHHHCCHHHHHCCCCEEEC LPLLGSVYFKTGLNQLRSSDDWKYSWRSRLSLRPVNALELSFSYFDFQEAQNKDAQDNYQ CCCHHHHHHHHHHHHHCCCCCCEEHHHCCCCCCCCCEEEEEEEEECHHHHCCCCCCCHHH QLSMDGRLSLQSMIDIPLAVYMQHIIDDSQPDFSAFLIGSDYSVLAAGMQMRFVFEYRNT HCCCCCCEEHHHHHCCCHHHHHHHHHCCCCCCCEEEEECCCHHHHHCCEEEEEEEEECCC KDDYLGETLDKKRYSVGSVVQMANDHQWQLFLHHNSSDNSIDSSINNPGNQLVGSYRFLI CHHHHHHHHHHHHCCHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHEE YKGMLSLSLSSSDTQENSDKVNAGLSWELHF EECHHEEEECCCCCCCCCCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA