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The map label for this gene is dctP [H]

Identifier: 119944479

GI number: 119944479

Start: 901049

End: 902047

Strand: Direct

Name: dctP [H]

Synonym: Ping_0708

Alternate gene names: 119944479

Gene position: 901049-902047 (Clockwise)

Preceding gene: 119944478

Following gene: 119944480

Centisome position: 19.76

GC content: 42.04

Gene sequence:

>999_bases
ATGTTAAAAAAATTAATGACCCTTTCCCTTGGCACCGTTGCTGTACTTGCAAGCTTTAATGCATCAGCAAGTTGCGAGCC
GGGTGAAATAGTGATCAAATTCAGCCATGTAACCAATGAGACCAGCCACCCTAAGGGCATCGCCGCTTCTTTATTATCTG
AGCGAGTGAATAAAGAGATGGATGGCAAGGCTTGTATGGAAGTTTTTCCTAATACCACGCTTTATAATGATGACCAGGCC
TTAGAAGCTATTTTAAGCGGTGATCTGCAGATGGCTGCTCCTTCTTTATCTAAGTTTGAGAAAATAACTAAAAAATTCCG
CATTTTTGATCTTCCCTTTTTATTCGCTGACGTGGCCGCCGTAGACCGTTTTCAAAATTCAGCATCCGGTGATATTTTGA
AAGATTCGATGGTCCGTCGAGGAATCAAAGGATTGGCATTTTGGCACAATGGCATGAAACAGATGTCAGCGAGCAAACCT
TTGTTATTGCCAAGTGATGCTGAAGGTCTTAAGTTCCGAGTCCAAGCATCCGATGTGCTTGTTGCTCAATTTGAACAACT
TGGCGCCAACCCCCAAAAAATGTCTTTCAGTGAAGTTTATGGTGGCCTGCAAACCAAAGTTATCGATGGTCAGGAAAATA
CCTGGTCAAATACCTACGGCAAAAAATTCTTCGAAGTACAAGATGGTGTGACCGAAACGAATCACGGTATTCTGGATTAC
CTGGTTGTGACATCTGATGATTGGTGGAAGGGTTTACCAACAGATGTACGTGAGCAGTTAGGCACAATAATGTCTGAAGT
GACTCAAACTAGAAATGGTGAGTCAATGAGAGTTAATGAAGAAAATAAACAAAAAATTATTGATGCCGGTGGCGTGGTGC
GCACTTTAACAGCTGAGCAGCGTCAAGCCTGGGTTGACGCACTGAAACCTGTCTGGAAAAAATTCGAAAAAGATATTGGT
AGTGATCTTCTTGAAGCTGCAATAGCATCAAATAAATAA

Upstream 100 bases:

>100_bases
TGATTGCTATGTGTTAATTACTATAAAGAATATGTAGTTCAACCAGCGTCCTGCATCATCAATGCGCAATTAGACTAAAA
CTATCGTACAGGAGTACAAC

Downstream 100 bases:

>100_bases
TATTATTATCTACCCATTTGCCAATACGCAGTACTGTATTTGCAAATGGGAGAATGAGACAGCAAGTTTTTTCTAATAGC
TAATAGCTAATAACCAATAA

Product: TRAP dicarboxylate transporter, DctP subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 332; Mature: 332

Protein sequence:

>332_residues
MLKKLMTLSLGTVAVLASFNASASCEPGEIVIKFSHVTNETSHPKGIAASLLSERVNKEMDGKACMEVFPNTTLYNDDQA
LEAILSGDLQMAAPSLSKFEKITKKFRIFDLPFLFADVAAVDRFQNSASGDILKDSMVRRGIKGLAFWHNGMKQMSASKP
LLLPSDAEGLKFRVQASDVLVAQFEQLGANPQKMSFSEVYGGLQTKVIDGQENTWSNTYGKKFFEVQDGVTETNHGILDY
LVVTSDDWWKGLPTDVREQLGTIMSEVTQTRNGESMRVNEENKQKIIDAGGVVRTLTAEQRQAWVDALKPVWKKFEKDIG
SDLLEAAIASNK

Sequences:

>Translated_332_residues
MLKKLMTLSLGTVAVLASFNASASCEPGEIVIKFSHVTNETSHPKGIAASLLSERVNKEMDGKACMEVFPNTTLYNDDQA
LEAILSGDLQMAAPSLSKFEKITKKFRIFDLPFLFADVAAVDRFQNSASGDILKDSMVRRGIKGLAFWHNGMKQMSASKP
LLLPSDAEGLKFRVQASDVLVAQFEQLGANPQKMSFSEVYGGLQTKVIDGQENTWSNTYGKKFFEVQDGVTETNHGILDY
LVVTSDDWWKGLPTDVREQLGTIMSEVTQTRNGESMRVNEENKQKIIDAGGVVRTLTAEQRQAWVDALKPVWKKFEKDIG
SDLLEAAIASNK
>Mature_332_residues
MLKKLMTLSLGTVAVLASFNASASCEPGEIVIKFSHVTNETSHPKGIAASLLSERVNKEMDGKACMEVFPNTTLYNDDQA
LEAILSGDLQMAAPSLSKFEKITKKFRIFDLPFLFADVAAVDRFQNSASGDILKDSMVRRGIKGLAFWHNGMKQMSASKP
LLLPSDAEGLKFRVQASDVLVAQFEQLGANPQKMSFSEVYGGLQTKVIDGQENTWSNTYGKKFFEVQDGVTETNHGILDY
LVVTSDDWWKGLPTDVREQLGTIMSEVTQTRNGESMRVNEENKQKIIDAGGVVRTLTAEQRQAWVDALKPVWKKFEKDIG
SDLLEAAIASNK

Specific function: Binds C4-dicarboxylates; part of the binding-protein- dependent transport system for uptake of C4-dicarboxylates [H]

COG id: COG1638

COG function: function code G; TRAP-type C4-dicarboxylate transport system, periplasmic component

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 7 family [H]

Homologues:

Organism=Escherichia coli, GI1790004, Length=322, Percent_Identity=32.6086956521739, Blast_Score=153, Evalue=1e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018389
- InterPro:   IPR004682 [H]

Pfam domain/function: PF03480 SBP_bac_7 [H]

EC number: NA

Molecular weight: Translated: 36681; Mature: 36681

Theoretical pI: Translated: 5.50; Mature: 5.50

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKKLMTLSLGTVAVLASFNASASCEPGEIVIKFSHVTNETSHPKGIAASLLSERVNKEM
CCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCC
DGKACMEVFPNTTLYNDDQALEAILSGDLQMAAPSLSKFEKITKKFRIFDLPFLFADVAA
CHHHHHHHCCCCCEECCHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHH
VDRFQNSASGDILKDSMVRRGIKGLAFWHNGMKQMSASKPLLLPSDAEGLKFRVQASDVL
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCEEEEEHHHHH
VAQFEQLGANPQKMSFSEVYGGLQTKVIDGQENTWSNTYGKKFFEVQDGVTETNHGILDY
HHHHHHHCCCCCCCCHHHHHCCHHEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEE
LVVTSDDWWKGLPTDVREQLGTIMSEVTQTRNGESMRVNEENKQKIIDAGGVVRTLTAEQ
EEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHCCCHHHHHHHHH
RQAWVDALKPVWKKFEKDIGSDLLEAAIASNK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLKKLMTLSLGTVAVLASFNASASCEPGEIVIKFSHVTNETSHPKGIAASLLSERVNKEM
CCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCC
DGKACMEVFPNTTLYNDDQALEAILSGDLQMAAPSLSKFEKITKKFRIFDLPFLFADVAA
CHHHHHHHCCCCCEECCHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHH
VDRFQNSASGDILKDSMVRRGIKGLAFWHNGMKQMSASKPLLLPSDAEGLKFRVQASDVL
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCEEEEEHHHHH
VAQFEQLGANPQKMSFSEVYGGLQTKVIDGQENTWSNTYGKKFFEVQDGVTETNHGILDY
HHHHHHHCCCCCCCCHHHHHCCHHEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEE
LVVTSDDWWKGLPTDVREQLGTIMSEVTQTRNGESMRVNEENKQKIIDAGGVVRTLTAEQ
EEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHCCCHHHHHHHHH
RQAWVDALKPVWKKFEKDIGSDLLEAAIASNK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1809844 [H]