| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119944472
Identifier: 119944472
GI number: 119944472
Start: 892316
End: 893014
Strand: Direct
Name: 119944472
Synonym: Ping_0701
Alternate gene names: NA
Gene position: 892316-893014 (Clockwise)
Preceding gene: 119944470
Following gene: 119944473
Centisome position: 19.57
GC content: 40.34
Gene sequence:
>699_bases ATGAATAAAATATTGATCAGTGTTATTTTTATATTAATTGCTCTTTTGGGGGCTAATACTTTGGTTGCAAAATATTATGG AGCAGAGGCAGAAAAAGTGCTTGTACCTCCATTAGTCGCGCTCGATGTTGTAGAAGTATCCCATTTGACCTTTATGCGCG AAGAAGAAAAATTCGCACGTGATGTTTACTTAACTTTGGCAGAGCAATATCCACAGCAAAAAATTTTTAAGCTTATAGCG ACGGGTGCAGAGCAAATTCATACTGATATGATGCGTGATAAACTGGAGATGTTTAATGTGCCAGATCCAAATCCTAATAG CGATAATTTGTCCGATATTATCGGTGTTTTTGCTGGAGCGGAATGGGGCTGGTACTTTACTGAACAGTATCAGTTTTTAA TAGATCAAGGCATGATCAGCGAGCTTGAAGCCTTATACGTCGCGGCTTATATTGAAGAGCTAAACATAAAAGATATTGCG CTGTGTCCAGACGTAATGATTGATAATGGATATCCCTCTCCATGCGGTTTAGCCTATACCACTCAAAAAGCCTTACAAAC CGCATATAACACATTACTTAGCGGATCAGAAAATCACCTGCGCGCTTTTGTGAGGCGGATCGAGGCGGTGATTGGAGAGG GTGATTATGAGGCTCAATATCTAACTCAAGCTGAAATGGATACCATTCTAGGCCGTTGA
Upstream 100 bases:
>100_bases CAGTTCCGCATAAAAAGGATAATATTCTATAATTAAACCGAGATTGAATAAATCATTCAATGTCATCGTTGTGTGAAAAA AGGCTAACCAGAGGCTCGCT
Downstream 100 bases:
>100_bases CTTACTGGTTTGATGGTTGAGTGTCCTCAATTTTATAATCCTTATAAAAAAGCCTCAGATCCAAGGTACAAAAAACCAAG ATCAACTCGGCTTTTTAACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 232; Mature: 232
Protein sequence:
>232_residues MNKILISVIFILIALLGANTLVAKYYGAEAEKVLVPPLVALDVVEVSHLTFMREEEKFARDVYLTLAEQYPQQKIFKLIA TGAEQIHTDMMRDKLEMFNVPDPNPNSDNLSDIIGVFAGAEWGWYFTEQYQFLIDQGMISELEALYVAAYIEELNIKDIA LCPDVMIDNGYPSPCGLAYTTQKALQTAYNTLLSGSENHLRAFVRRIEAVIGEGDYEAQYLTQAEMDTILGR
Sequences:
>Translated_232_residues MNKILISVIFILIALLGANTLVAKYYGAEAEKVLVPPLVALDVVEVSHLTFMREEEKFARDVYLTLAEQYPQQKIFKLIA TGAEQIHTDMMRDKLEMFNVPDPNPNSDNLSDIIGVFAGAEWGWYFTEQYQFLIDQGMISELEALYVAAYIEELNIKDIA LCPDVMIDNGYPSPCGLAYTTQKALQTAYNTLLSGSENHLRAFVRRIEAVIGEGDYEAQYLTQAEMDTILGR >Mature_232_residues MNKILISVIFILIALLGANTLVAKYYGAEAEKVLVPPLVALDVVEVSHLTFMREEEKFARDVYLTLAEQYPQQKIFKLIA TGAEQIHTDMMRDKLEMFNVPDPNPNSDNLSDIIGVFAGAEWGWYFTEQYQFLIDQGMISELEALYVAAYIEELNIKDIA LCPDVMIDNGYPSPCGLAYTTQKALQTAYNTLLSGSENHLRAFVRRIEAVIGEGDYEAQYLTQAEMDTILGR
Specific function: Unknown
COG id: COG4902
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019243 - InterPro: IPR012347 - InterPro: IPR009078 [H]
Pfam domain/function: PF09968 DUF2202 [H]
EC number: NA
Molecular weight: Translated: 26119; Mature: 26119
Theoretical pI: Translated: 4.17; Mature: 4.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKILISVIFILIALLGANTLVAKYYGAEAEKVLVPPLVALDVVEVSHLTFMREEEKFAR CHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHH DVYLTLAEQYPQQKIFKLIATGAEQIHTDMMRDKLEMFNVPDPNPNSDNLSDIIGVFAGA HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCC EWGWYFTEQYQFLIDQGMISELEALYVAAYIEELNIKDIALCPDVMIDNGYPSPCGLAYT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCEECCCCCCCCCCHHH TQKALQTAYNTLLSGSENHLRAFVRRIEAVIGEGDYEAQYLTQAEMDTILGR HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MNKILISVIFILIALLGANTLVAKYYGAEAEKVLVPPLVALDVVEVSHLTFMREEEKFAR CHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHH DVYLTLAEQYPQQKIFKLIATGAEQIHTDMMRDKLEMFNVPDPNPNSDNLSDIIGVFAGA HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCC EWGWYFTEQYQFLIDQGMISELEALYVAAYIEELNIKDIALCPDVMIDNGYPSPCGLAYT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCEECCCCCCCCCCHHH TQKALQTAYNTLLSGSENHLRAFVRRIEAVIGEGDYEAQYLTQAEMDTILGR HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]