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The map label for this gene is ypjH [H]

Identifier: 119944231

GI number: 119944231

Start: 576328

End: 577482

Strand: Direct

Name: ypjH [H]

Synonym: Ping_0454

Alternate gene names: 119944231

Gene position: 576328-577482 (Clockwise)

Preceding gene: 119944221

Following gene: 119944232

Centisome position: 12.64

GC content: 36.36

Gene sequence:

>1155_bases
TTGCAAAAAAAAATAAATATTGTCCACTATTGGGGTGGGTGTCCGAATGTTGCAACGTCGAAAGAGCTTAGTTTTTTGAT
GTTAATTAAAAAATGCGCTGAACATGGCTGGAATAATTGGTTAGTGTTATCAAAATACCCTGAGAACTCTGAATTGATTG
ATCCTATCCTACAAACTGGTTGTGAAATTATTTATCAACCAAGATCTAAAGGTAATTTTGATCCCGCGAGTATTTATTGT
AATTTTAAGCTCCTTTGGGGAATAAAATGTCATGTATTTCATTGCTATAACGATCATACCAGCCCAATCATAGCCGCTAT
GTTTGCGAGGGTTCCTATTAGAGTGTGGTCTAAATTAGCAATGTCCTCTTATTATGAGCAAGGTATTACCCCTAAAGGTT
TGCAAAGGCTAATGCCAAGTACTTGGATTACTTGCTTGTTTTCGAATCGAATATTGGCAATAAGTGATGCAGCAGGAAAA
GAAATATATGAACAAGTCGGTTTTAAAAATAAAGTAGCCACAGTTCAAGTACCTGTGTCACTTGAACGATTCATGACAAT
AACAGGTGCTGGTATAAGAGATGAATTTAATCTTCAACAATCAGATATTGTTATTACTGCTGTTGGTCATTTCATTGAGG
TAAAAGGGTGGGACATCGCAATAAAAGCCTTTGCAAGGGTTTATAAAGAAATTCCAAATGCAAAACTGTTATTGGTTGGG
AAAAAAACATCTGTAGAATTCTATCAAAAAATATGTTTGCAAATTGAGCGATATGATTTGCAAAAGCATGTGTTTTTTGC
GGGTAATCGTAGCGATATTCCTGAAATTCTTAAGGCAAGTAACATCTTCATTCTACCTTCACGCTCAGAGGGTACGCCTG
CTGCGCTTATTGAGGCAATGGCTGCCGGTTTACCATGCATTGCTGCTGAAACAGGAGGCATTCCCGAAGTTATAGTTCAC
GGTAATAATGGTCTTATGTTTCGAAGGGAAGATGCCGAAGATCTAGCTGATAAAATTGTATGTTTGCTCTCTGATTCAGA
GCTTAGGCTTCAACTAACTAAAATGGCACAGAAAAACTTGGAAAAATTTTCTATAGAAAATTATGTGGATAGCGTCTTTT
CTCACTATCAGAATCTGCTTAAATATTATGATTAA

Upstream 100 bases:

>100_bases
GTGCAAGTATATGTAATAAAATATCAGTGCTAACATAATAAGAACTATGTTTTGCTTAAAGATCCATAGCATCAAATAAT
TAATTTAAAGGTGGTCGCAC

Downstream 100 bases:

>100_bases
TAAAAAAGACACAAAAAAATCGTGATGTAATGTTAACTCAGGTGTTTATTATAATGAAACGTATTTTTAAAAAACTAATA
TTAAGCTGTCTAGATAAGTT

Product: glycosyl transferase, group 1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 384; Mature: 384

Protein sequence:

>384_residues
MQKKINIVHYWGGCPNVATSKELSFLMLIKKCAEHGWNNWLVLSKYPENSELIDPILQTGCEIIYQPRSKGNFDPASIYC
NFKLLWGIKCHVFHCYNDHTSPIIAAMFARVPIRVWSKLAMSSYYEQGITPKGLQRLMPSTWITCLFSNRILAISDAAGK
EIYEQVGFKNKVATVQVPVSLERFMTITGAGIRDEFNLQQSDIVITAVGHFIEVKGWDIAIKAFARVYKEIPNAKLLLVG
KKTSVEFYQKICLQIERYDLQKHVFFAGNRSDIPEILKASNIFILPSRSEGTPAALIEAMAAGLPCIAAETGGIPEVIVH
GNNGLMFRREDAEDLADKIVCLLSDSELRLQLTKMAQKNLEKFSIENYVDSVFSHYQNLLKYYD

Sequences:

>Translated_384_residues
MQKKINIVHYWGGCPNVATSKELSFLMLIKKCAEHGWNNWLVLSKYPENSELIDPILQTGCEIIYQPRSKGNFDPASIYC
NFKLLWGIKCHVFHCYNDHTSPIIAAMFARVPIRVWSKLAMSSYYEQGITPKGLQRLMPSTWITCLFSNRILAISDAAGK
EIYEQVGFKNKVATVQVPVSLERFMTITGAGIRDEFNLQQSDIVITAVGHFIEVKGWDIAIKAFARVYKEIPNAKLLLVG
KKTSVEFYQKICLQIERYDLQKHVFFAGNRSDIPEILKASNIFILPSRSEGTPAALIEAMAAGLPCIAAETGGIPEVIVH
GNNGLMFRREDAEDLADKIVCLLSDSELRLQLTKMAQKNLEKFSIENYVDSVFSHYQNLLKYYD
>Mature_384_residues
MQKKINIVHYWGGCPNVATSKELSFLMLIKKCAEHGWNNWLVLSKYPENSELIDPILQTGCEIIYQPRSKGNFDPASIYC
NFKLLWGIKCHVFHCYNDHTSPIIAAMFARVPIRVWSKLAMSSYYEQGITPKGLQRLMPSTWITCLFSNRILAISDAAGK
EIYEQVGFKNKVATVQVPVSLERFMTITGAGIRDEFNLQQSDIVITAVGHFIEVKGWDIAIKAFARVYKEIPNAKLLLVG
KKTSVEFYQKICLQIERYDLQKHVFFAGNRSDIPEILKASNIFILPSRSEGTPAALIEAMAAGLPCIAAETGGIPEVIVH
GNNGLMFRREDAEDLADKIVCLLSDSELRLQLTKMAQKNLEKFSIENYVDSVFSHYQNLLKYYD

Specific function: Involved In The Addition Of The First Glucose Residue To The Lipopolysaccharide Core. [C]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 43446; Mature: 43446

Theoretical pI: Translated: 8.09; Mature: 8.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKKINIVHYWGGCPNVATSKELSFLMLIKKCAEHGWNNWLVLSKYPENSELIDPILQTG
CCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHCC
CEIIYQPRSKGNFDPASIYCNFKLLWGIKCHVFHCYNDHTSPIIAAMFARVPIRVWSKLA
CCEEECCCCCCCCCCEEEEEEEEEEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHH
MSSYYEQGITPKGLQRLMPSTWITCLFSNRILAISDAAGKEIYEQVGFKNKVATVQVPVS
HHHHHHCCCCHHHHHHHCHHHHHHHHHCCCEEEEECHHHHHHHHHCCCCCCEEEEEECCC
LERFMTITGAGIRDEFNLQQSDIVITAVGHFIEVKGWDIAIKAFARVYKEIPNAKLLLVG
HHHHEEEECCCCCCCCCCCCCCEEEEEECCEEEECCCHHHHHHHHHHHHHCCCCEEEEEE
KKTSVEFYQKICLQIERYDLQKHVFFAGNRSDIPEILKASNIFILPSRSEGTPAALIEAM
CCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHCCCCEEEEECCCCCCHHHHHHHH
AAGLPCIAAETGGIPEVIVHGNNGLMFRREDAEDLADKIVCLLSDSELRLQLTKMAQKNL
HCCCCEEEECCCCCCEEEEECCCCEEEEECCHHHHHHHEEEEECCCHHHHHHHHHHHHHH
EKFSIENYVDSVFSHYQNLLKYYD
HHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQKKINIVHYWGGCPNVATSKELSFLMLIKKCAEHGWNNWLVLSKYPENSELIDPILQTG
CCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHCC
CEIIYQPRSKGNFDPASIYCNFKLLWGIKCHVFHCYNDHTSPIIAAMFARVPIRVWSKLA
CCEEECCCCCCCCCCEEEEEEEEEEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHH
MSSYYEQGITPKGLQRLMPSTWITCLFSNRILAISDAAGKEIYEQVGFKNKVATVQVPVS
HHHHHHCCCCHHHHHHHCHHHHHHHHHCCCEEEEECHHHHHHHHHCCCCCCEEEEEECCC
LERFMTITGAGIRDEFNLQQSDIVITAVGHFIEVKGWDIAIKAFARVYKEIPNAKLLLVG
HHHHEEEECCCCCCCCCCCCCCEEEEEECCEEEECCCHHHHHHHHHHHHHCCCCEEEEEE
KKTSVEFYQKICLQIERYDLQKHVFFAGNRSDIPEILKASNIFILPSRSEGTPAALIEAM
CCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHCCCCEEEEECCCCCCHHHHHHHH
AAGLPCIAAETGGIPEVIVHGNNGLMFRREDAEDLADKIVCLLSDSELRLQLTKMAQKNL
HCCCCEEEECCCCCCEEEEECCCCEEEEECCHHHHHHHEEEEECCCHHHHHHHHHHHHHH
EKFSIENYVDSVFSHYQNLLKYYD
HHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Hexosyltransferases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]