Definition | Psychromonas ingrahamii 37, complete genome. |
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Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is 119944191
Identifier: 119944191
GI number: 119944191
Start: 522498
End: 523562
Strand: Direct
Name: 119944191
Synonym: Ping_0411
Alternate gene names: NA
Gene position: 522498-523562 (Clockwise)
Preceding gene: 119944190
Following gene: 119944198
Centisome position: 11.46
GC content: 35.4
Gene sequence:
>1065_bases ATGAAATATTTTGCAATAGCTGTATTTATCGTATTAATAGGTGCAGTGATAGGTACCTGGTCCAATGCGTCAAGCACTTT GCCAGCTGAGCAACTTGCGATGAAGGTAAAAGCGGCGTCTGCTGATTTGGACATTGCAAAGAGCCAAGAGCAAAGTATAC CTTTATCACCTGTAGAAGAAGAGGTTGAAGATTCAGCATTTAAAAGTGCACCAAAAGAAGCCGAGTCAATATTGATTTCA CAAAAGCAAGCATTGCAGATTATTGATGATAATTTATACAATGCTATAAATAATCAGGTGGTAGATGTCACGGCGGAGAG AGAATTGTTGGATTACTTACGAAAAACCAACAATGAGCAAGTTTATCTGTTTATTATGGAAAAATTAGAGAGTACTAACA AGGGGAATAAAAGTGATGATCGATTAATTGAATATGCTTTAAGCTTATTGGCTGCCGTTGATTCTCCTCGAGCAAGTGAA CTTTTTTTTAATGTTGTTAGGCAAGATGATTGGTCAGGATCTAATGCTATTTATTCGGTCAGAAGTTCTATTTCGAGATT AGCCCGTAATAATAATAATAATTATAATTCTTTAATTCAACAAACCTTTACCCAAGTTAATGATGAAAATCCTTTTCTAA ATGAGCTGGCAGTAGCGATTGCCGAAGATGCAGAAATAGAACAAGTTGACTACTTAATTAGCTATGTTGATAGCCCTTTA AAAAATAAAAGTGCAGTGATTAATCAAGCAATGCACAGTATAAATAAAGAGTCTCTTGTCCCTCATATAACCACTTATAT CTCAGATAGTTCCTCAAGTAGCGTACAAAATGTAGCATTGAATACCTTGGCGAATATGGGGCAATATGAAGCAGCATCAG CTTTGATAGCGTGGAGTTCGACACAGAGAATTGAGGCAAAAAAACAAGTGGAATCGTTGTTTACTATTGCATTAGCTAGA AGTCCATCGACGCAACGTGCTATTGAAAAAGAGATCTTATTCTATGAGTTTACTAGCGAAGAATTAAAACAAACGATTAT AAATCTATCCTCTTTTTTTAAATAA
Upstream 100 bases:
>100_bases AAACTAGTAATATATTACATACGGAAGAAACGTCACAAGTGACAGATATTGATTGGCTTTTTGAAGGCTTATATCCAACA TTAGGCTGGGGATTAAAAGA
Downstream 100 bases:
>100_bases GAAAAAATTGAGGAATATATTCGAATATTCTACGCTGTTTGGGATGTTCTACTATAAGGAGTGAAGGGCATAAGTGTCGG ATCTGTTTCAACCAATATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 354; Mature: 354
Protein sequence:
>354_residues MKYFAIAVFIVLIGAVIGTWSNASSTLPAEQLAMKVKAASADLDIAKSQEQSIPLSPVEEEVEDSAFKSAPKEAESILIS QKQALQIIDDNLYNAINNQVVDVTAERELLDYLRKTNNEQVYLFIMEKLESTNKGNKSDDRLIEYALSLLAAVDSPRASE LFFNVVRQDDWSGSNAIYSVRSSISRLARNNNNNYNSLIQQTFTQVNDENPFLNELAVAIAEDAEIEQVDYLISYVDSPL KNKSAVINQAMHSINKESLVPHITTYISDSSSSSVQNVALNTLANMGQYEAASALIAWSSTQRIEAKKQVESLFTIALAR SPSTQRAIEKEILFYEFTSEELKQTIINLSSFFK
Sequences:
>Translated_354_residues MKYFAIAVFIVLIGAVIGTWSNASSTLPAEQLAMKVKAASADLDIAKSQEQSIPLSPVEEEVEDSAFKSAPKEAESILIS QKQALQIIDDNLYNAINNQVVDVTAERELLDYLRKTNNEQVYLFIMEKLESTNKGNKSDDRLIEYALSLLAAVDSPRASE LFFNVVRQDDWSGSNAIYSVRSSISRLARNNNNNYNSLIQQTFTQVNDENPFLNELAVAIAEDAEIEQVDYLISYVDSPL KNKSAVINQAMHSINKESLVPHITTYISDSSSSSVQNVALNTLANMGQYEAASALIAWSSTQRIEAKKQVESLFTIALAR SPSTQRAIEKEILFYEFTSEELKQTIINLSSFFK >Mature_354_residues MKYFAIAVFIVLIGAVIGTWSNASSTLPAEQLAMKVKAASADLDIAKSQEQSIPLSPVEEEVEDSAFKSAPKEAESILIS QKQALQIIDDNLYNAINNQVVDVTAERELLDYLRKTNNEQVYLFIMEKLESTNKGNKSDDRLIEYALSLLAAVDSPRASE LFFNVVRQDDWSGSNAIYSVRSSISRLARNNNNNYNSLIQQTFTQVNDENPFLNELAVAIAEDAEIEQVDYLISYVDSPL KNKSAVINQAMHSINKESLVPHITTYISDSSSSSVQNVALNTLANMGQYEAASALIAWSSTQRIEAKKQVESLFTIALAR SPSTQRAIEKEILFYEFTSEELKQTIINLSSFFK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39407; Mature: 39407
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYFAIAVFIVLIGAVIGTWSNASSTLPAEQLAMKVKAASADLDIAKSQEQSIPLSPVEE CHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCHHHCCCCCCCCCCCHHH EVEDSAFKSAPKEAESILISQKQALQIIDDNLYNAINNQVVDVTAERELLDYLRKTNNEQ HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHCCCCE VYLFIMEKLESTNKGNKSDDRLIEYALSLLAAVDSPRASELFFNVVRQDDWSGSNAIYSV EEEEEEHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHH RSSISRLARNNNNNYNSLIQQTFTQVNDENPFLNELAVAIAEDAEIEQVDYLISYVDSPL HHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCC KNKSAVINQAMHSINKESLVPHITTYISDSSSSSVQNVALNTLANMGQYEAASALIAWSS CHHHHHHHHHHHHCCHHHCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHEECC TQRIEAKKQVESLFTIALARSPSTQRAIEKEILFYEFTSEELKQTIINLSSFFK HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEECCHHHHHHHHHHHHHHCC >Mature Secondary Structure MKYFAIAVFIVLIGAVIGTWSNASSTLPAEQLAMKVKAASADLDIAKSQEQSIPLSPVEE CHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCHHHCCCCCCCCCCCHHH EVEDSAFKSAPKEAESILISQKQALQIIDDNLYNAINNQVVDVTAERELLDYLRKTNNEQ HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHCCCCE VYLFIMEKLESTNKGNKSDDRLIEYALSLLAAVDSPRASELFFNVVRQDDWSGSNAIYSV EEEEEEHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHH RSSISRLARNNNNNYNSLIQQTFTQVNDENPFLNELAVAIAEDAEIEQVDYLISYVDSPL HHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCC KNKSAVINQAMHSINKESLVPHITTYISDSSSSSVQNVALNTLANMGQYEAASALIAWSS CHHHHHHHHHHHHCCHHHCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHEECC TQRIEAKKQVESLFTIALARSPSTQRAIEKEILFYEFTSEELKQTIINLSSFFK HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEECCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA