Definition | Psychromonas ingrahamii 37, complete genome. |
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Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is thiE [H]
Identifier: 119944142
GI number: 119944142
Start: 464642
End: 466144
Strand: Direct
Name: thiE [H]
Synonym: Ping_0361
Alternate gene names: 119944142
Gene position: 464642-466144 (Clockwise)
Preceding gene: 119944141
Following gene: 119944143
Centisome position: 10.19
GC content: 47.37
Gene sequence:
>1503_bases ATGAATAAACTTGTTTGGAGTATTGGTGCTTCTGATTGCACTGGTGGTGGGGGGATTCAGGCGGATCTCCATACTTTTAA AGACTTAGGCGCTGATGGCTGCTCGGTGATTAGCGCGGTTACCGCGCAAAACTCGGCGACCGTGAGTTTGGTTGAAAGTG TATCGGAACAGATGTTCACCGATCAATTAGCCTGTTTAACGGCCGATATGCAGGCAAAGGTGATCAAAATTGGTTTAATT ACCAGTGTGAAACATGTGCAGATTCTCGCTGAAAAATTGGCTGAATTTAAACAAACCTGGGCGGTGCCACCTTTTGTGAT TTACGATCCGGTCGCAGTTGCATTGACGGGTGAGAAGATGGCAGAAGAAGGGCTTGTTGAGCTTATTAGAACAGCCTTAC TACCCTGCATTGATTTGTTAACCGCCAATGCCGGTGAAGTACTTACCTTATCCGGTCATGCTTTAATCAGTGGTGAGTCG CTAAAACCTGCCGCTTTAAAACTCATCTCGCTGGGCTGTCAAAGTGTCTTGATTAAAGGTGGTGATTTTGAACTGGTGGA TAAAATAGCGCTTGATTACTGGACAGATGGCAAGCGTGAAATCGCATTAAGCAGCGCACGACTGACTCGTATGGAGAGTC ACGGCACGGGGGGCATCTTAGCCAGTGCCATTGGCGCAACTATCGCCTTGGGCTACTTTATTGAAGATGCTTTGGTGGTT GCGAAAGCCTATCTGAATCAAGAGCTAAAAGCGGCCAAAAAGCTTGGCTTCTATGGAATAGCCCATTTAGGCTGGCCAAC CAATAAAACTGATTTTCCGGAAGTAGTGTTACCCGAGTCAAAAATCGGTTATGAGTTAGATCTGCCGGGGACATTGGAAG CCGGGCCCGGTTTTGCTTCCTGTGGCACTTTGAAACTGGGGCTATACCCAGTGCTGGACAGTGTTGAATGGTTGGACAAA GTCCTGAAGTTGGGGGTTAAAACCCTGCAGCTGCGAATTAAAGACAAACAACCGGAACAAGTTGAGCAGCAGATTATTGA GGCCATTGCCCTTGGACGTAAATATAATGCGCGTTTGTTTATTAATGACTACTGGCAACTGGCCATCAAACATCAGGCCT ACGGGGTGCATCTTGGTCAGGAAGATATGGACGTTGCGGATTTACCCATGATTGCCGATGCGGGCCTGCGCTTAGGGCTT AGTACCCATGGTTATTATGAGATATTACGGGCGCAGCAGTTAAAACCCAGTTATATCGCACTGGGGCATATTTTCCCCAC TCAAACGAAACAGATGCCATCGGATCCGCAGGGGCTAAGCCGTTTAGGAAAATATGCACAGTTGTTATCCGATATTCCAA CGGTGGCGATTGGCGGCATTAATCTTGAGCGGGCTACCACAGTTTGGAAAACAGGGGTTGGCAGTATTGCAGTGGTTAGC GCAATAACCCATGCCGACTCTCCCAAAATCGCCATTGAATCATTTAATCAAGTGATCCAGTAA
Upstream 100 bases:
>100_bases AACGACTCTGGTGCTGAAATTTATCAGCCAGTTTTATAAAAAAGCTGTCGGCTGTCGGCTGTTAGCTGTCAGCAGATAGC TGCTCTTGTTAAGGATAAAT
Downstream 100 bases:
>100_bases AAAATAGCCAAGAGTGGTGAGTTTAAGGCTCTCTACTTGAAGTATTCATAATAATATTAAGGTAAATCATGTTAACGGAT CCTGAAGTATTACGTTATAG
Product: thiamine-phosphate pyrophosphorylase
Products: NA
Alternate protein names: TMP pyrophosphorylase; TMP-PPase; Thiamine-phosphate synthase [H]
Number of amino acids: Translated: 500; Mature: 500
Protein sequence:
>500_residues MNKLVWSIGASDCTGGGGIQADLHTFKDLGADGCSVISAVTAQNSATVSLVESVSEQMFTDQLACLTADMQAKVIKIGLI TSVKHVQILAEKLAEFKQTWAVPPFVIYDPVAVALTGEKMAEEGLVELIRTALLPCIDLLTANAGEVLTLSGHALISGES LKPAALKLISLGCQSVLIKGGDFELVDKIALDYWTDGKREIALSSARLTRMESHGTGGILASAIGATIALGYFIEDALVV AKAYLNQELKAAKKLGFYGIAHLGWPTNKTDFPEVVLPESKIGYELDLPGTLEAGPGFASCGTLKLGLYPVLDSVEWLDK VLKLGVKTLQLRIKDKQPEQVEQQIIEAIALGRKYNARLFINDYWQLAIKHQAYGVHLGQEDMDVADLPMIADAGLRLGL STHGYYEILRAQQLKPSYIALGHIFPTQTKQMPSDPQGLSRLGKYAQLLSDIPTVAIGGINLERATTVWKTGVGSIAVVS AITHADSPKIAIESFNQVIQ
Sequences:
>Translated_500_residues MNKLVWSIGASDCTGGGGIQADLHTFKDLGADGCSVISAVTAQNSATVSLVESVSEQMFTDQLACLTADMQAKVIKIGLI TSVKHVQILAEKLAEFKQTWAVPPFVIYDPVAVALTGEKMAEEGLVELIRTALLPCIDLLTANAGEVLTLSGHALISGES LKPAALKLISLGCQSVLIKGGDFELVDKIALDYWTDGKREIALSSARLTRMESHGTGGILASAIGATIALGYFIEDALVV AKAYLNQELKAAKKLGFYGIAHLGWPTNKTDFPEVVLPESKIGYELDLPGTLEAGPGFASCGTLKLGLYPVLDSVEWLDK VLKLGVKTLQLRIKDKQPEQVEQQIIEAIALGRKYNARLFINDYWQLAIKHQAYGVHLGQEDMDVADLPMIADAGLRLGL STHGYYEILRAQQLKPSYIALGHIFPTQTKQMPSDPQGLSRLGKYAQLLSDIPTVAIGGINLERATTVWKTGVGSIAVVS AITHADSPKIAIESFNQVIQ >Mature_500_residues MNKLVWSIGASDCTGGGGIQADLHTFKDLGADGCSVISAVTAQNSATVSLVESVSEQMFTDQLACLTADMQAKVIKIGLI TSVKHVQILAEKLAEFKQTWAVPPFVIYDPVAVALTGEKMAEEGLVELIRTALLPCIDLLTANAGEVLTLSGHALISGES LKPAALKLISLGCQSVLIKGGDFELVDKIALDYWTDGKREIALSSARLTRMESHGTGGILASAIGATIALGYFIEDALVV AKAYLNQELKAAKKLGFYGIAHLGWPTNKTDFPEVVLPESKIGYELDLPGTLEAGPGFASCGTLKLGLYPVLDSVEWLDK VLKLGVKTLQLRIKDKQPEQVEQQIIEAIALGRKYNARLFINDYWQLAIKHQAYGVHLGQEDMDVADLPMIADAGLRLGL STHGYYEILRAQQLKPSYIALGHIFPTQTKQMPSDPQGLSRLGKYAQLLSDIPTVAIGGINLERATTVWKTGVGSIAVVS AITHADSPKIAIESFNQVIQ
Specific function: Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) [H]
COG id: COG0352
COG function: function code H; Thiamine monophosphate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TMP-PPase family [H]
Homologues:
Organism=Escherichia coli, GI1790426, Length=196, Percent_Identity=63.7755102040816, Blast_Score=254, Evalue=1e-68, Organism=Escherichia coli, GI1788420, Length=251, Percent_Identity=32.2709163346614, Blast_Score=117, Evalue=1e-27, Organism=Saccharomyces cerevisiae, GI6325378, Length=236, Percent_Identity=28.3898305084746, Blast_Score=83, Evalue=1e-16, Organism=Saccharomyces cerevisiae, GI6324517, Length=237, Percent_Identity=30.379746835443, Blast_Score=81, Evalue=4e-16, Organism=Saccharomyces cerevisiae, GI6324997, Length=237, Percent_Identity=29.535864978903, Blast_Score=80, Evalue=6e-16, Organism=Saccharomyces cerevisiae, GI6325042, Length=157, Percent_Identity=32.484076433121, Blast_Score=66, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR022998 - InterPro: IPR003733 [H]
Pfam domain/function: PF02581 TMP-TENI [H]
EC number: =2.5.1.3 [H]
Molecular weight: Translated: 53691; Mature: 53691
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKLVWSIGASDCTGGGGIQADLHTFKDLGADGCSVISAVTAQNSATVSLVESVSEQMFT CCCEEEECCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHH DQLACLTADMQAKVIKIGLITSVKHVQILAEKLAEFKQTWAVPPFVIYDPVAVALTGEKM HHHHHHHHCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCEEEEEECHHH AEEGLVELIRTALLPCIDLLTANAGEVLTLSGHALISGESLKPAALKLISLGCQSVLIKG HHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEEEECCCCCHHHHHHHHHCCHHEEEEC GDFELVDKIALDYWTDGKREIALSSARLTRMESHGTGGILASAIGATIALGYFIEDALVV CCHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH AKAYLNQELKAAKKLGFYGIAHLGWPTNKTDFPEVVLPESKIGYELDLPGTLEAGPGFAS HHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCEECCCCCCCEEECCCCCCCCCCCCCC CGTLKLGLYPVLDSVEWLDKVLKLGVKTLQLRIKDKQPEQVEQQIIEAIALGRKYNARLF CCEEEECHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCEEE INDYWQLAIKHQAYGVHLGQEDMDVADLPMIADAGLRLGLSTHGYYEILRAQQLKPSYIA EECCEEEEEEEEEEEEECCCCCCCHHCCCCHHCCCCEECCCCCHHHHHHHHHCCCCCEEE LGHIFPTQTKQMPSDPQGLSRLGKYAQLLSDIPTVAIGGINLERATTVWKTGVGSIAVVS EECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHCCCCHHHHHH AITHADSPKIAIESFNQVIQ HHHCCCCCCHHHHHHHHHCC >Mature Secondary Structure MNKLVWSIGASDCTGGGGIQADLHTFKDLGADGCSVISAVTAQNSATVSLVESVSEQMFT CCCEEEECCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHH DQLACLTADMQAKVIKIGLITSVKHVQILAEKLAEFKQTWAVPPFVIYDPVAVALTGEKM HHHHHHHHCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCEEEEEECHHH AEEGLVELIRTALLPCIDLLTANAGEVLTLSGHALISGESLKPAALKLISLGCQSVLIKG HHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEEEECCCCCHHHHHHHHHCCHHEEEEC GDFELVDKIALDYWTDGKREIALSSARLTRMESHGTGGILASAIGATIALGYFIEDALVV CCHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH AKAYLNQELKAAKKLGFYGIAHLGWPTNKTDFPEVVLPESKIGYELDLPGTLEAGPGFAS HHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCEECCCCCCCEEECCCCCCCCCCCCCC CGTLKLGLYPVLDSVEWLDKVLKLGVKTLQLRIKDKQPEQVEQQIIEAIALGRKYNARLF CCEEEECHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCEEE INDYWQLAIKHQAYGVHLGQEDMDVADLPMIADAGLRLGLSTHGYYEILRAQQLKPSYIA EECCEEEEEEEEEEEEECCCCCCCHHCCCCHHCCCCEECCCCCHHHHHHHHHCCCCCEEE LGHIFPTQTKQMPSDPQGLSRLGKYAQLLSDIPTVAIGGINLERATTVWKTGVGSIAVVS EECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHCCCCHHHHHH AITHADSPKIAIESFNQVIQ HHHCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA