Click here to switch to the map view.

The map label for this gene is qseB2 [H]

Identifier: 119899961

GI number: 119899961

Start: 4031270

End: 4031950

Strand: Direct

Name: qseB2 [H]

Synonym: azo3672

Alternate gene names: 119899961

Gene position: 4031270-4031950 (Clockwise)

Preceding gene: 119899960

Following gene: 119899962

Centisome position: 92.12

GC content: 73.13

Gene sequence:

>681_bases
ATGCGCCTGCTGCTGATCGAAGACGACCCGATGATCGGGGCCGCCGTGCAACGCGGCCTGCGCCAGGACGGGTACGCCGT
GGACTGGGTGCGCGACGGCACCGCCGGCGTCCTGGCCCTGACCACCCCGGCCGCCGGAGGCGAAGCGCCCTACGACCTGC
TGCTGCTCGACCTCGGCCTGCCCGGCAAGGATGGACTGGCGGTGCTTGCCGAACTCCGGGGCGCCGCCAACACGGTGCCG
GTGCTGGTGCTGACCGCGCGCGACGCGGTGGCAGATCGCATCCGCGGCCTCGACGCCGGGGCCGACGACTATCTCGTCAA
GCCCTTCGACCTCGACGAACTCGGCGCCCGGGTGCGCGCGCTGCTGCGCCGGCGTGCCGGGCGCAGCGAACCGGTGGTGC
GGCAGGCCGGCCTGGTGGTCGATCCCGCCACCCACGCCGTCACCGTCGATGGCGCCCCGGTGCGGCTGTCCGCGCGCGAA
TTCGCGCTGCTGCAGGCCCTGCTCGAACACCCCGGCAAACCGCTGTCGCGCGCTCAGCTCGAAGAGCGCCTGTACGGATG
GGGCGAGGAGGTGGAAAGCAACGCGGTGGAGGTGCACATCCACGCCTTGCGGCGCAAGCTGGGCGCCGAGCGCATCCGCA
ACCTGCGCGGCGTCGGCTGGTTCGTCCCGGTGCAGGCATGA

Upstream 100 bases:

>100_bases
AACCGCCCCGCCCGTCTGTAAGCCCGGGGCGCGGCGCTCCCCGCGCCGACGGGCTAGAATCGCATCCCCCGCGGCCCGGC
CGCGTGTCCGCCCCGACTCC

Downstream 100 bases:

>100_bases
ACGACGCAGCCCCCGAACCCGAAGCGCGTGCGCCCGTCCACGGCGCTGAAGCGCCCCGGCCGCACCCGGATGACGCGGGC
ACGCCCCCCGCCCGGCCGGC

Product: DNA-binding response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MRLLLIEDDPMIGAAVQRGLRQDGYAVDWVRDGTAGVLALTTPAAGGEAPYDLLLLDLGLPGKDGLAVLAELRGAANTVP
VLVLTARDAVADRIRGLDAGADDYLVKPFDLDELGARVRALLRRRAGRSEPVVRQAGLVVDPATHAVTVDGAPVRLSARE
FALLQALLEHPGKPLSRAQLEERLYGWGEEVESNAVEVHIHALRRKLGAERIRNLRGVGWFVPVQA

Sequences:

>Translated_226_residues
MRLLLIEDDPMIGAAVQRGLRQDGYAVDWVRDGTAGVLALTTPAAGGEAPYDLLLLDLGLPGKDGLAVLAELRGAANTVP
VLVLTARDAVADRIRGLDAGADDYLVKPFDLDELGARVRALLRRRAGRSEPVVRQAGLVVDPATHAVTVDGAPVRLSARE
FALLQALLEHPGKPLSRAQLEERLYGWGEEVESNAVEVHIHALRRKLGAERIRNLRGVGWFVPVQA
>Mature_226_residues
MRLLLIEDDPMIGAAVQRGLRQDGYAVDWVRDGTAGVLALTTPAAGGEAPYDLLLLDLGLPGKDGLAVLAELRGAANTVP
VLVLTARDAVADRIRGLDAGADDYLVKPFDLDELGARVRALLRRRAGRSEPVVRQAGLVVDPATHAVTVDGAPVRLSARE
FALLQALLEHPGKPLSRAQLEERLYGWGEEVESNAVEVHIHALRRKLGAERIRNLRGVGWFVPVQA

Specific function: Member of a two-component regulatory system qseB/qseC [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1789402, Length=220, Percent_Identity=49.5454545454545, Blast_Score=211, Evalue=2e-56,
Organism=Escherichia coli, GI1790552, Length=222, Percent_Identity=43.2432432432432, Blast_Score=174, Evalue=5e-45,
Organism=Escherichia coli, GI87082012, Length=231, Percent_Identity=40.6926406926407, Blast_Score=148, Evalue=3e-37,
Organism=Escherichia coli, GI1786784, Length=230, Percent_Identity=37.3913043478261, Blast_Score=141, Evalue=3e-35,
Organism=Escherichia coli, GI1786599, Length=226, Percent_Identity=37.1681415929204, Blast_Score=134, Evalue=5e-33,
Organism=Escherichia coli, GI1787375, Length=225, Percent_Identity=32.4444444444444, Blast_Score=126, Evalue=1e-30,
Organism=Escherichia coli, GI1789809, Length=235, Percent_Identity=34.0425531914894, Blast_Score=124, Evalue=6e-30,
Organism=Escherichia coli, GI1788394, Length=226, Percent_Identity=36.7256637168142, Blast_Score=119, Evalue=2e-28,
Organism=Escherichia coli, GI1790860, Length=223, Percent_Identity=34.5291479820628, Blast_Score=114, Evalue=4e-27,
Organism=Escherichia coli, GI1787229, Length=228, Percent_Identity=34.6491228070175, Blast_Score=112, Evalue=2e-26,
Organism=Escherichia coli, GI1786911, Length=207, Percent_Identity=37.1980676328502, Blast_Score=109, Evalue=1e-25,
Organism=Escherichia coli, GI2367329, Length=234, Percent_Identity=32.4786324786325, Blast_Score=108, Evalue=3e-25,
Organism=Escherichia coli, GI1790863, Length=232, Percent_Identity=31.4655172413793, Blast_Score=97, Evalue=8e-22,
Organism=Escherichia coli, GI145693140, Length=190, Percent_Identity=31.0526315789474, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1788550, Length=129, Percent_Identity=27.1317829457364, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1790437, Length=120, Percent_Identity=32.5, Blast_Score=64, Evalue=8e-12,
Organism=Escherichia coli, GI1790299, Length=127, Percent_Identity=29.9212598425197, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 24332; Mature: 24332

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLLLIEDDPMIGAAVQRGLRQDGYAVDWVRDGTAGVLALTTPAAGGEAPYDLLLLDLGL
CEEEEECCCCCCHHHHHHHHCCCCCEEEEEECCCCEEEEEECCCCCCCCCEEEEEEECCC
PGKDGLAVLAELRGAANTVPVLVLTARDAVADRIRGLDAGADDYLVKPFDLDELGARVRA
CCCCHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHCCCCCCCCCEECCCCHHHHHHHHHH
LLRRRAGRSEPVVRQAGLVVDPATHAVTVDGAPVRLSAREFALLQALLEHPGKPLSRAQL
HHHHHCCCCCCHHHHCCEEECCCCCEEEECCCCEEECHHHHHHHHHHHHCCCCCHHHHHH
EERLYGWGEEVESNAVEVHIHALRRKLGAERIRNLRGVGWFVPVQA
HHHHHCCCHHHCCCCEEEHHHHHHHHHHHHHHHHHCCCCEEEEECC
>Mature Secondary Structure
MRLLLIEDDPMIGAAVQRGLRQDGYAVDWVRDGTAGVLALTTPAAGGEAPYDLLLLDLGL
CEEEEECCCCCCHHHHHHHHCCCCCEEEEEECCCCEEEEEECCCCCCCCCEEEEEEECCC
PGKDGLAVLAELRGAANTVPVLVLTARDAVADRIRGLDAGADDYLVKPFDLDELGARVRA
CCCCHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHCCCCCCCCCEECCCCHHHHHHHHHH
LLRRRAGRSEPVVRQAGLVVDPATHAVTVDGAPVRLSAREFALLQALLEHPGKPLSRAQL
HHHHHCCCCCCHHHHCCEEECCCCCEEEECCCCEEECHHHHHHHHHHHHCCCCCHHHHHH
EERLYGWGEEVESNAVEVHIHALRRKLGAERIRNLRGVGWFVPVQA
HHHHHCCCHHHCCCCEEEHHHHHHHHHHHHHHHHHCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]