Definition | Azoarcus sp. BH72 chromosome, complete genome. |
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Accession | NC_008702 |
Length | 4,376,040 |
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The map label for this gene is ssuA
Identifier: 119899801
GI number: 119899801
Start: 3854510
End: 3855544
Strand: Direct
Name: ssuA
Synonym: azo3512
Alternate gene names: NA
Gene position: 3854510-3855544 (Clockwise)
Preceding gene: 119899788
Following gene: 119899802
Centisome position: 88.08
GC content: 68.21
Gene sequence:
>1035_bases ATGACCTGCAAGACCTCGCTGTCCCGCCGTCTCTTCCTCTCTGCCGCCGTCGCGCTGGCCTGCGCCGCGCCGGTCGCGCA CGCCGCCGCCCCGGTGAAGATCAAGTTCACCCTCGACTGGCGCTTCGAAGGCCCCGCGGCGCCCTTCCTGCTCGCCAAGG CGAAAAACTATTTCGCCGCCGAAGGGCTGGACGTGGAGATCGACGCCGGCAACGGTTCCGCGGGCGCGGTCACCCGCGTC GCCACTGGCGCCTACGAGATGGGCTTTGCCGACTTCAACGCGCTGGTGGAATACGACGCCAAGACGCCGGGCTCGAAGAT CCAGGGCGTCTACATGGTCTACAACTCGACCCCGGCGGCGGTCTTCGTGCTGAAGAAATCCGGCGTGACCAAGCCGGCCG ATCTCGCCGGCAAGACGCTGGCCGCGCCGGTGTTCGACGCCGGCCGCAAGGCCTGGCCGGCCTTCGCCAAGGCCAACGGC TTGGGCGCCGAGGCGGTGAAGTGGCAGACGGTGGAGCCGGCGATCCGCGAAACCCTGCTCGCCCGCGGCGACGTGGATGG CATCACCGGCTTCTATTTCACCAGCGTGCTCAACCTGGAGGCACGCGGCGTGAAGCCGGAAGACATCGTCGCACTCAAGT TCCCCGACCACGGCGTCGAGCTGTACGGCAACACCATCATCGCCAGCCCGAAGATGCTGGCCGAGCAGCCCAAGGCGGTG GAAGGCTTCGTGCGCGCCTTCAACAAGGCGCTGAAGGAAACCATCGCCAACCCCGAAGCGGCGGTCGCCTACGTGAAGGA GCGTGATCCGCTGATCAATCTGCCGCTGGAAACCCGCCGCCTCAAGCTCGCGCTCGACAGCGTGGTGGTCACGCCGGAAA CGAAGGCGATCGGTCTCGGCGCGGTGGATGCCGCCCGCCTCAAGCGCTCGGTCAGCGAAGTCGCCGCTGCCTTCGCGCTG CCGGCGACCCCGGAGGCCGGCACGCTGTTCTCCACCGCCTTCCTGCCCCCCGCCGCCGACCGCGCCATCAAGTAA
Upstream 100 bases:
>100_bases GGCGGGCAAAAATCGCCCGAATCACCCCCATATCGCATGGCACGTCGCTTGCCATACCGGGACATCGTCATCGACACCAT CCGTTCCGGAGCCTTTCCCA
Downstream 100 bases:
>100_bases GGAAGATGCGGCCGTCGCCTGCCGGCAAGGCGGGCGGCGCCGCGAACACGCCATGGATTTCGTACGTTTCGAGAATGTCA GCCTCGCCTACCAGGCCGGC
Product: putative periplasmic-binding protein
Products: NA
Alternate protein names: NMT1/THI5-Like Domain-Containing Protein; Twin-Arginine Translocation Pathway Signal; Diguanylate Cyclase; Membrane Lipoprotein Lipid Attachment Site; NMT1/THI5 Like Domain-Containing Protein; Tat Pathway Signal Sequence Domain-Containing Protein; ABC Transporter Periplasmic Components; NMT1/THI5-Like Family; Nitrate/Sulfonate/Bicarbonate ABC Transporter; Diguanylate Cyclase/Phosphodiesterase; Sulfonate/Nitrate Transport System; Diguanylate Cyclase With PAS/PAC Sensor; Signal Peptide; NMT1/THI5 Like Family; Tat Pathway Signal Sequence Domain Protein; Pyrimidine Biosynthesis; NMT1/THI5-Ike Domain-Containing Protein; NMT1/THI5 Family Protein; ABC Transporter Periplasmic Protein; ABC-Type Transporter Periplasmic Component; Lipoprotein; Exported Protein; Multi-Sensor Signal Transduction Histidine Kinase
Number of amino acids: Translated: 344; Mature: 343
Protein sequence:
>344_residues MTCKTSLSRRLFLSAAVALACAAPVAHAAAPVKIKFTLDWRFEGPAAPFLLAKAKNYFAAEGLDVEIDAGNGSAGAVTRV ATGAYEMGFADFNALVEYDAKTPGSKIQGVYMVYNSTPAAVFVLKKSGVTKPADLAGKTLAAPVFDAGRKAWPAFAKANG LGAEAVKWQTVEPAIRETLLARGDVDGITGFYFTSVLNLEARGVKPEDIVALKFPDHGVELYGNTIIASPKMLAEQPKAV EGFVRAFNKALKETIANPEAAVAYVKERDPLINLPLETRRLKLALDSVVVTPETKAIGLGAVDAARLKRSVSEVAAAFAL PATPEAGTLFSTAFLPPAADRAIK
Sequences:
>Translated_344_residues MTCKTSLSRRLFLSAAVALACAAPVAHAAAPVKIKFTLDWRFEGPAAPFLLAKAKNYFAAEGLDVEIDAGNGSAGAVTRV ATGAYEMGFADFNALVEYDAKTPGSKIQGVYMVYNSTPAAVFVLKKSGVTKPADLAGKTLAAPVFDAGRKAWPAFAKANG LGAEAVKWQTVEPAIRETLLARGDVDGITGFYFTSVLNLEARGVKPEDIVALKFPDHGVELYGNTIIASPKMLAEQPKAV EGFVRAFNKALKETIANPEAAVAYVKERDPLINLPLETRRLKLALDSVVVTPETKAIGLGAVDAARLKRSVSEVAAAFAL PATPEAGTLFSTAFLPPAADRAIK >Mature_343_residues TCKTSLSRRLFLSAAVALACAAPVAHAAAPVKIKFTLDWRFEGPAAPFLLAKAKNYFAAEGLDVEIDAGNGSAGAVTRVA TGAYEMGFADFNALVEYDAKTPGSKIQGVYMVYNSTPAAVFVLKKSGVTKPADLAGKTLAAPVFDAGRKAWPAFAKANGL GAEAVKWQTVEPAIRETLLARGDVDGITGFYFTSVLNLEARGVKPEDIVALKFPDHGVELYGNTIIASPKMLAEQPKAVE GFVRAFNKALKETIANPEAAVAYVKERDPLINLPLETRRLKLALDSVVVTPETKAIGLGAVDAARLKRSVSEVAAAFALP ATPEAGTLFSTAFLPPAADRAIK
Specific function: Unknown
COG id: COG0715
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36252; Mature: 36121
Theoretical pI: Translated: 9.41; Mature: 9.41
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTCKTSLSRRLFLSAAVALACAAPVAHAAAPVKIKFTLDWRFEGPAAPFLLAKAKNYFAA CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCEEEECCCCCEEE EGLDVEIDAGNGSAGAVTRVATGAYEMGFADFNALVEYDAKTPGSKIQGVYMVYNSTPAA CCCEEEEECCCCCCCCHHHEECCCHHCCCHHHHHHEEECCCCCCCCCCEEEEEEECCCEE VFVLKKSGVTKPADLAGKTLAAPVFDAGRKAWPAFAKANGLGAEAVKWQTVEPAIRETLL EEEEECCCCCCCHHHCCCHHCCHHHHCCCCCCCHHHHCCCCCCCCEEEECCCHHHHHHHH ARGDVDGITGFYFTSVLNLEARGVKPEDIVALKFPDHGVELYGNTIIASPKMLAEQPKAV HCCCCCCCHHHHHHHHHEEEECCCCCCCEEEEECCCCCEEEECCEEEECCHHHHCCCHHH EGFVRAFNKALKETIANPEAAVAYVKERDPLINLPLETRRLKLALDSVVVTPETKAIGLG HHHHHHHHHHHHHHHCCCHHEEEEEECCCCEEECCCHHHHEEEEEEEEEECCCCCEEECC AVDAARLKRSVSEVAAAFALPATPEAGTLFSTAFLPPAADRAIK CHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCC >Mature Secondary Structure TCKTSLSRRLFLSAAVALACAAPVAHAAAPVKIKFTLDWRFEGPAAPFLLAKAKNYFAA CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCEEEECCCCCEEE EGLDVEIDAGNGSAGAVTRVATGAYEMGFADFNALVEYDAKTPGSKIQGVYMVYNSTPAA CCCEEEEECCCCCCCCHHHEECCCHHCCCHHHHHHEEECCCCCCCCCCEEEEEEECCCEE VFVLKKSGVTKPADLAGKTLAAPVFDAGRKAWPAFAKANGLGAEAVKWQTVEPAIRETLL EEEEECCCCCCCHHHCCCHHCCHHHHCCCCCCCHHHHCCCCCCCCEEEECCCHHHHHHHH ARGDVDGITGFYFTSVLNLEARGVKPEDIVALKFPDHGVELYGNTIIASPKMLAEQPKAV HCCCCCCCHHHHHHHHHEEEECCCCCCCEEEEECCCCCEEEECCEEEECCHHHHCCCHHH EGFVRAFNKALKETIANPEAAVAYVKERDPLINLPLETRRLKLALDSVVVTPETKAIGLG HHHHHHHHHHHHHHHCCCHHEEEEEECCCCEEECCCHHHHEEEEEEEEEECCCCCEEECC AVDAARLKRSVSEVAAAFALPATPEAGTLFSTAFLPPAADRAIK CHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA