Click here to switch to the map view.

The map label for this gene is 119855034

Identifier: 119855034

GI number: 119855034

Start: 155551

End: 156717

Strand: Direct

Name: 119855034

Synonym: Mkms_5643

Alternate gene names: NA

Gene position: 155551-156717 (Clockwise)

Preceding gene: 119855033

Following gene: 119855035

Centisome position: 51.49

GC content: 63.32

Gene sequence:

>1167_bases
TTGAGTTCGCTGCGCGACAAGGCCTGCATCGTCGGCGTTGGTCATACGGCCTACCGTCGTGATGGCACTGAGTCGGCAAC
GGACCTTGGCCTGCAACTCGAAGCGGCCCATGCCGCGATCGTGGATGCCGGGTTGTCGGCTGGCGAGATCGATGGGCTCA
TCTGCCCGATCAACGGTGGCACGGCCGAAGATTTTATCGCGAATCTCGGCCTGACGCATGTTCGTTACGCGGTGACTTCC
CATACCGGAGGCGCGGCAAGTGTGGCGGGTCTGGCAACTGCGGCGATGGCGGTTTGGTCGGGCGTCGCGCGGCATGTCCT
CATTCCCGCGGGCTGGTGTGGGTACTCAGGTCCGCGTGCCCGCGGGATGGCATCGAGCGCGGACATGGCGATAGGCAAGG
TTGTCCGGGACTATTACGCGCCACAGGGCGCGGTGTCGGCCGTGCACCAGTATGCGCTCGTGGCCGACCGATACGTCCGC
AAGTATGACGTGCCGCCTGAAGCGATGGGGGCGGTGGCAGTCGCGTTTCGTGCTAACGCGCAGCTCAACTCGAATGCGGT
GATGTGCGGCCGTGAGCTGACGATGCAGGAGTATCTCGACGCTCCACCGATCAGTACGCCGTTTCGTTTGTTCGATTGCA
GTCTGGAGACCGACGGCGCAGCGGCGGTGGTGGTATCAGCGGCCGATCGTGCGGCTGACAGCCCGCACCGGCCGGTGTTT
GTGATGAGTGTGGCCGAAGGTCGCCCATTTCCCGTCGATGAGTTCGCCAACAGGGCCGACCCATTGGAGATTGGGCTTGC
CGAGGCGGCGCCGCGCGCATTTGCCGACGCTGGTGTCACCCCGTCTGACATCGATCTGCTCGAGGTTTACGACAGTTTCA
CTGTCAACGTGTTGCGGCAGATCGAATCGGCCGGATTCTGCAAGCCGGGCGAAGCAGCGGATTTCGTTCTCGACGGATGT
ATCGCCGCTGACGGTTCGTTGCCCACGAATCTCAACGGCGGTTTGCTCTCCGAAGCCCACGTGCAAGGCATGAACAATCT
GGTCGAGGCGGTGCGGCAGCTGCGCGGTGGTTTACCGCAGCGGCAGGTCCACAATGCGGAGTTGGCGGTAGTGACCGGTA
TGGGCGGCGGATGGGGTTCAGGTGCTCTCGCGATATTGCGTCGGTGA

Upstream 100 bases:

>100_bases
TGCTGACCGAGTGGCTCGGCATGGCCGACTCGGAGTACGAGGCGCTGGTGTCGAGTGGCGTCGTCGGGGCGGTCGACGTT
GACGGAGAGGTTCCCGGGCA

Downstream 100 bases:

>100_bases
CAGCGTTGTGACTGGCCGGTTCACAAGGGGACCGATGTGACACGAACGGGACCGGATGTCGCAGCACCGCCGTTGCCATC
CCTGGAGGGTCTCACGGCCC

Product: putative nonspecific lipid-transfer protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 388; Mature: 387

Protein sequence:

>388_residues
MSSLRDKACIVGVGHTAYRRDGTESATDLGLQLEAAHAAIVDAGLSAGEIDGLICPINGGTAEDFIANLGLTHVRYAVTS
HTGGAASVAGLATAAMAVWSGVARHVLIPAGWCGYSGPRARGMASSADMAIGKVVRDYYAPQGAVSAVHQYALVADRYVR
KYDVPPEAMGAVAVAFRANAQLNSNAVMCGRELTMQEYLDAPPISTPFRLFDCSLETDGAAAVVVSAADRAADSPHRPVF
VMSVAEGRPFPVDEFANRADPLEIGLAEAAPRAFADAGVTPSDIDLLEVYDSFTVNVLRQIESAGFCKPGEAADFVLDGC
IAADGSLPTNLNGGLLSEAHVQGMNNLVEAVRQLRGGLPQRQVHNAELAVVTGMGGGWGSGALAILRR

Sequences:

>Translated_388_residues
MSSLRDKACIVGVGHTAYRRDGTESATDLGLQLEAAHAAIVDAGLSAGEIDGLICPINGGTAEDFIANLGLTHVRYAVTS
HTGGAASVAGLATAAMAVWSGVARHVLIPAGWCGYSGPRARGMASSADMAIGKVVRDYYAPQGAVSAVHQYALVADRYVR
KYDVPPEAMGAVAVAFRANAQLNSNAVMCGRELTMQEYLDAPPISTPFRLFDCSLETDGAAAVVVSAADRAADSPHRPVF
VMSVAEGRPFPVDEFANRADPLEIGLAEAAPRAFADAGVTPSDIDLLEVYDSFTVNVLRQIESAGFCKPGEAADFVLDGC
IAADGSLPTNLNGGLLSEAHVQGMNNLVEAVRQLRGGLPQRQVHNAELAVVTGMGGGWGSGALAILRR
>Mature_387_residues
SSLRDKACIVGVGHTAYRRDGTESATDLGLQLEAAHAAIVDAGLSAGEIDGLICPINGGTAEDFIANLGLTHVRYAVTSH
TGGAASVAGLATAAMAVWSGVARHVLIPAGWCGYSGPRARGMASSADMAIGKVVRDYYAPQGAVSAVHQYALVADRYVRK
YDVPPEAMGAVAVAFRANAQLNSNAVMCGRELTMQEYLDAPPISTPFRLFDCSLETDGAAAVVVSAADRAADSPHRPVFV
MSVAEGRPFPVDEFANRADPLEIGLAEAAPRAFADAGVTPSDIDLLEVYDSFTVNVLRQIESAGFCKPGEAADFVLDGCI
AADGSLPTNLNGGLLSEAHVQGMNNLVEAVRQLRGGLPQRQVHNAELAVVTGMGGGWGSGALAILRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI19923233, Length=396, Percent_Identity=23.989898989899, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI302344762, Length=113, Percent_Identity=36.283185840708, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI302344760, Length=113, Percent_Identity=36.283185840708, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI302344767, Length=113, Percent_Identity=36.283185840708, Blast_Score=70, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17537653, Length=389, Percent_Identity=24.6786632390745, Blast_Score=86, Evalue=4e-17,
Organism=Drosophila melanogaster, GI24585051, Length=404, Percent_Identity=25, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI19921506, Length=409, Percent_Identity=24.2053789731051, Blast_Score=84, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002155
- InterPro:   IPR016039
- InterPro:   IPR016038
- InterPro:   IPR020617
- InterPro:   IPR020616 [H]

Pfam domain/function: PF02803 Thiolase_C; PF00108 Thiolase_N [H]

EC number: NA

Molecular weight: Translated: 40291; Mature: 40160

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSLRDKACIVGVGHTAYRRDGTESATDLGLQLEAAHAAIVDAGLSAGEIDGLICPINGG
CCCCCCCEEEEECCCHHHHCCCCCCHHHCCEEEEHHHHHHHHCCCCCCCCCCEEEECCCC
TAEDFIANLGLTHVRYAVTSHTGGAASVAGLATAAMAVWSGVARHVLIPAGWCGYSGPRA
CHHHHHHHCCHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCC
RGMASSADMAIGKVVRDYYAPQGAVSAVHQYALVADRYVRKYDVPPEAMGAVAVAFRANA
CCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHEEEEEECCC
QLNSNAVMCGRELTMQEYLDAPPISTPFRLFDCSLETDGAAAVVVSAADRAADSPHRPVF
CCCCCEEEECHHHHHHHHCCCCCCCCCCEEEEECCCCCCCEEEEEEEHHHCCCCCCCCEE
VMSVAEGRPFPVDEFANRADPLEIGLAEAAPRAFADAGVTPSDIDLLEVYDSFTVNVLRQ
EEEECCCCCCCHHHHHCCCCCCEECHHHHCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
IESAGFCKPGEAADFVLDGCIAADGSLPTNLNGGLLSEAHVQGMNNLVEAVRQLRGGLPQ
HHHCCCCCCCCCHHHHHHHHEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCH
RQVHNAELAVVTGMGGGWGSGALAILRR
HHHCCCEEEEEEECCCCCCCCHHHEECC
>Mature Secondary Structure 
SSLRDKACIVGVGHTAYRRDGTESATDLGLQLEAAHAAIVDAGLSAGEIDGLICPINGG
CCCCCCEEEEECCCHHHHCCCCCCHHHCCEEEEHHHHHHHHCCCCCCCCCCEEEECCCC
TAEDFIANLGLTHVRYAVTSHTGGAASVAGLATAAMAVWSGVARHVLIPAGWCGYSGPRA
CHHHHHHHCCHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCC
RGMASSADMAIGKVVRDYYAPQGAVSAVHQYALVADRYVRKYDVPPEAMGAVAVAFRANA
CCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHEEEEEECCC
QLNSNAVMCGRELTMQEYLDAPPISTPFRLFDCSLETDGAAAVVVSAADRAADSPHRPVF
CCCCCEEEECHHHHHHHHCCCCCCCCCCEEEEECCCCCCCEEEEEEEHHHCCCCCCCCEE
VMSVAEGRPFPVDEFANRADPLEIGLAEAAPRAFADAGVTPSDIDLLEVYDSFTVNVLRQ
EEEECCCCCCCHHHHHCCCCCCEECHHHHCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
IESAGFCKPGEAADFVLDGCIAADGSLPTNLNGGLLSEAHVQGMNNLVEAVRQLRGGLPQ
HHHCCCCCCCCCHHHHHHHHEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCH
RQVHNAELAVVTGMGGGWGSGALAILRR
HHHCCCEEEEEEECCCCCCCCHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]