Definition | Mycobacterium sp. KMS plasmid pMKMS01, complete sequence. |
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Accession | NC_008703 |
Length | 302,089 |
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The map label for this gene is pht4 [H]
Identifier: 119855005
GI number: 119855005
Start: 122478
End: 123707
Strand: Direct
Name: pht4 [H]
Synonym: Mkms_5612
Alternate gene names: 119855005
Gene position: 122478-123707 (Clockwise)
Preceding gene: 119855004
Following gene: 119855006
Centisome position: 40.54
GC content: 62.03
Gene sequence:
>1230_bases ATGACAGATGTCGCGTCACGCGAGCTCGGCCTAGGATTTCTCGGAATCGGTCAGGCTGTCGCCCGAATCTTCCAGCAGTA CCCGGACATGTCGACGCTGCCGTATCGGGTTGTGGCGGCTGCGGATACCCGATCACACTCGCTCGCCCGCTTCGCCACCG AGTTCTCGGGCCAGACCTACACGAACGCAGAGCAACTGTGTGCCGATCCAAGCGTGGACGTCGTCTACATCGCCACCCCT CCCGAGCTGCATCGGGAGCATGCGCTAATGGCCGCACGTCACGGAAAACACATGATCGTCGAAAAGCCGTTGGCCATGTC GATCGACGATTGCACTGCAATGGTCGAGGCGGCCCAGGCAGCGGGCGTGCAGCTGATGGCCGGCCACACACACAGCTTTG ATGCGCCGGTGCGAGCGATGGCCGAACTTGTAGCCAGTGGCGATCTCGGCGAGTTGCTCATGGTCAACACCTGGAATTTC AACGACTTCAACCGGCGACCGTGGCCGACTTCGGAATTGCGCTCGACCAGCGGGCCAGTTCTCAACCAGGGGCCCCACCA GGTCGATATCGTGCGGCAGATAGTCGGCGGTGTGGCCAGAACAGTGCGTGCGTCGACAATATGGGACGACGTCCGGGAAT GCGTCGGGGGATACACCTGTCATCTCGGATTCGAATCAGGAGCTTCCGCCACGCTCGTCTATGACGCGCGAGCTTTCTTC GACGTCGCGGAGTTGCACTCGTGGGTGGCAGAGGACGGCGGCCGCCGCAGCCCCCAAGCCAACCAGCGTGTAGCCAATAA CTTCGCTGCGCTCAGTCAGAACCCTGACCAACTTGAAGTCGCACTGGAAGCTCAGAAGGAACAGGGCCGCTACGGTGCTG CGACGACGACCGAAGAGTCACAGGAGCTGTGGGGTTACTCCGCCCCCGGAGAGATCATCCACCACCCCTACTTCGGCCTG ACCGTGGTGTCCTGCGAACGCGGCGCGATCAGGCAGTCGCCCGACGGGCTGGTGGTGTACGGGCAAAACGGATTGCAGGA AATACCGGTCGCCCACACGATGCGTGGTAGGGCCGCAGAGTTGGCTGAACTACATCGGGCGATCACTGAGGACCGCCCTG TTCAGCACGACGGTCGCTGGGGGCGCGCGACGCTAGAAGTATGTTTCGCCATCCTGCAGTCGGCCTACGAAGATCGCGAA GTCGTTCTCTCCCACCAGGTATCGCTGTGA
Upstream 100 bases:
>100_bases GGCCGCCCGGGTCATCACCCTGGCTCATAGCGTTCTTCCACGAGCGATTTCGATCTTCTTCTAATGCCCAGTCGTTCACT AGCTCTCAGTTAGGTCGCAC
Downstream 100 bases:
>100_bases CTTCAGAGGAGGAGAAATCGTGGGTGAGATTGTAGCGGGTTACGCGTCGTCGCATGCCTTCACTTTCATCCCGCCTCCCA GGTGGGAAGGCTTCCGCATA
Product: oxidoreductase domain-containing protein
Products: NA
Alternate protein names: DHP dehydrogenase [H]
Number of amino acids: Translated: 409; Mature: 408
Protein sequence:
>409_residues MTDVASRELGLGFLGIGQAVARIFQQYPDMSTLPYRVVAAADTRSHSLARFATEFSGQTYTNAEQLCADPSVDVVYIATP PELHREHALMAARHGKHMIVEKPLAMSIDDCTAMVEAAQAAGVQLMAGHTHSFDAPVRAMAELVASGDLGELLMVNTWNF NDFNRRPWPTSELRSTSGPVLNQGPHQVDIVRQIVGGVARTVRASTIWDDVRECVGGYTCHLGFESGASATLVYDARAFF DVAELHSWVAEDGGRRSPQANQRVANNFAALSQNPDQLEVALEAQKEQGRYGAATTTEESQELWGYSAPGEIIHHPYFGL TVVSCERGAIRQSPDGLVVYGQNGLQEIPVAHTMRGRAAELAELHRAITEDRPVQHDGRWGRATLEVCFAILQSAYEDRE VVLSHQVSL
Sequences:
>Translated_409_residues MTDVASRELGLGFLGIGQAVARIFQQYPDMSTLPYRVVAAADTRSHSLARFATEFSGQTYTNAEQLCADPSVDVVYIATP PELHREHALMAARHGKHMIVEKPLAMSIDDCTAMVEAAQAAGVQLMAGHTHSFDAPVRAMAELVASGDLGELLMVNTWNF NDFNRRPWPTSELRSTSGPVLNQGPHQVDIVRQIVGGVARTVRASTIWDDVRECVGGYTCHLGFESGASATLVYDARAFF DVAELHSWVAEDGGRRSPQANQRVANNFAALSQNPDQLEVALEAQKEQGRYGAATTTEESQELWGYSAPGEIIHHPYFGL TVVSCERGAIRQSPDGLVVYGQNGLQEIPVAHTMRGRAAELAELHRAITEDRPVQHDGRWGRATLEVCFAILQSAYEDRE VVLSHQVSL >Mature_408_residues TDVASRELGLGFLGIGQAVARIFQQYPDMSTLPYRVVAAADTRSHSLARFATEFSGQTYTNAEQLCADPSVDVVYIATPP ELHREHALMAARHGKHMIVEKPLAMSIDDCTAMVEAAQAAGVQLMAGHTHSFDAPVRAMAELVASGDLGELLMVNTWNFN DFNRRPWPTSELRSTSGPVLNQGPHQVDIVRQIVGGVARTVRASTIWDDVRECVGGYTCHLGFESGASATLVYDARAFFD VAELHSWVAEDGGRRSPQANQRVANNFAALSQNPDQLEVALEAQKEQGRYGAATTTEESQELWGYSAPGEIIHHPYFGLT VVSCERGAIRQSPDGLVVYGQNGLQEIPVAHTMRGRAAELAELHRAITEDRPVQHDGRWGRATLEVCFAILQSAYEDREV VLSHQVSL
Specific function: Transforms 4,5-dihydro-4,5-dihydroxyphthalate to 4,5- dihydroxyphthalate [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082405, Length=157, Percent_Identity=34.3949044585987, Blast_Score=95, Evalue=9e-21, Organism=Escherichia coli, GI1787574, Length=196, Percent_Identity=24.4897959183673, Blast_Score=64, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR000683 - InterPro: IPR004104 [H]
Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 44722; Mature: 44590
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDVASRELGLGFLGIGQAVARIFQQYPDMSTLPYRVVAAADTRSHSLARFATEFSGQTY CCCCCCHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCC TNAEQLCADPSVDVVYIATPPELHREHALMAARHGKHMIVEKPLAMSIDDCTAMVEAAQA CCHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHH AGVQLMAGHTHSFDAPVRAMAELVASGDLGELLMVNTWNFNDFNRRPWPTSELRSTSGPV CCEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCHHHHHCCCCCC LNQGPHQVDIVRQIVGGVARTVRASTIWDDVRECVGGYTCHLGFESGASATLVYDARAFF CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCEEEEECHHHHH DVAELHSWVAEDGGRRSPQANQRVANNFAALSQNPDQLEVALEAQKEQGRYGAATTTEES HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCH QELWGYSAPGEIIHHPYFGLTVVSCERGAIRQSPDGLVVYGQNGLQEIPVAHTMRGRAAE HHHCCCCCCCHHHCCCCCCEEEEEECCCCCCCCCCCEEEECCCCCCCCCHHHHHCCHHHH LAELHRAITEDRPVQHDGRWGRATLEVCFAILQSAYEDREVVLSHQVSL HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCC >Mature Secondary Structure TDVASRELGLGFLGIGQAVARIFQQYPDMSTLPYRVVAAADTRSHSLARFATEFSGQTY CCCCCHHHCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCC TNAEQLCADPSVDVVYIATPPELHREHALMAARHGKHMIVEKPLAMSIDDCTAMVEAAQA CCHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHH AGVQLMAGHTHSFDAPVRAMAELVASGDLGELLMVNTWNFNDFNRRPWPTSELRSTSGPV CCEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCHHHHHCCCCCC LNQGPHQVDIVRQIVGGVARTVRASTIWDDVRECVGGYTCHLGFESGASATLVYDARAFF CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCEEEEECHHHHH DVAELHSWVAEDGGRRSPQANQRVANNFAALSQNPDQLEVALEAQKEQGRYGAATTTEES HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCH QELWGYSAPGEIIHHPYFGLTVVSCERGAIRQSPDGLVVYGQNGLQEIPVAHTMRGRAAE HHHCCCCCCCHHHCCCCCCEEEEEECCCCCCCCCCCEEEECCCCCCCCCHHHHHCCHHHH LAELHRAITEDRPVQHDGRWGRATLEVCFAILQSAYEDREVVLSHQVSL HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA