Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119776477

Identifier: 119776477

GI number: 119776477

Start: 3972350

End: 3972652

Strand: Direct

Name: 119776477

Synonym: Sama_3345

Alternate gene names: NA

Gene position: 3972350-3972652 (Clockwise)

Preceding gene: 119776476

Following gene: 119776478

Centisome position: 92.25

GC content: 52.81

Gene sequence:

>303_bases
ATGTCCTGGATTTGCAAACATTGCCACACCAAGGTGGAAGACGACGCCTTTGAAATCTGCTGGCAGTGTAATACTCCCCG
TGATGGCGAAGCGCCTGCACCAAAGGCTGCAATCACTTGTTTACGTTGCCATACTCCCCTGCGTTTTGTCGGCAGAAAGG
ACTTCCATGAGGGCAGCCGTTGGGGCGTACTGGGCGAGCTGGGAGAGCTTTTCGTCAGCAAAGAAGCCCTCGATATGTAT
GCCTGCCAGGACTGTGGGAAGGTGGAGTTTTTTCTCACTGGTTACCAGGGCGATGACATTTAA

Upstream 100 bases:

>100_bases
AGCAAGCCGCTATCATGCCTGCGCTCGACAGCGATAAGCTGGACCCCGCTCTGTGTCAGTCAGACACGGAATCAATTCAG
AATGGTTTAGGAGAAACCTG

Downstream 100 bases:

>100_bases
CCTCACCCAATTAATGCCAACCGGCTGGCGCCGAGATAACGGCTTAACAGCGCTATACGAGAACCCAAATGATCCCTGTG
TGCCTGAGCCCCGCCCACTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 100; Mature: 99

Protein sequence:

>100_residues
MSWICKHCHTKVEDDAFEICWQCNTPRDGEAPAPKAAITCLRCHTPLRFVGRKDFHEGSRWGVLGELGELFVSKEALDMY
ACQDCGKVEFFLTGYQGDDI

Sequences:

>Translated_100_residues
MSWICKHCHTKVEDDAFEICWQCNTPRDGEAPAPKAAITCLRCHTPLRFVGRKDFHEGSRWGVLGELGELFVSKEALDMY
ACQDCGKVEFFLTGYQGDDI
>Mature_99_residues
SWICKHCHTKVEDDAFEICWQCNTPRDGEAPAPKAAITCLRCHTPLRFVGRKDFHEGSRWGVLGELGELFVSKEALDMYA
CQDCGKVEFFLTGYQGDDI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11331; Mature: 11200

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

8.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
10.0 %Cys+Met (Translated Protein)
8.1 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
9.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSWICKHCHTKVEDDAFEICWQCNTPRDGEAPAPKAAITCLRCHTPLRFVGRKDFHEGSR
CCCCHHHCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHCCCCHHHHCCCCCCCCCC
WGVLGELGELFVSKEALDMYACQDCGKVEFFLTGYQGDDI
CCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC
>Mature Secondary Structure 
SWICKHCHTKVEDDAFEICWQCNTPRDGEAPAPKAAITCLRCHTPLRFVGRKDFHEGSR
CCCHHHCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHCCCCHHHHCCCCCCCCCC
WGVLGELGELFVSKEALDMYACQDCGKVEFFLTGYQGDDI
CCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA