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The map label for this gene is yqiC [H]

Identifier: 119776403

GI number: 119776403

Start: 3887161

End: 3887418

Strand: Direct

Name: yqiC [H]

Synonym: Sama_3271

Alternate gene names: 119776403

Gene position: 3887161-3887418 (Clockwise)

Preceding gene: 119776402

Following gene: 119776406

Centisome position: 90.27

GC content: 51.16

Gene sequence:

>258_bases
ATGCTGAACCCCAAAAAAATCGAAGACTTGGCCAAACAGCTCAGTGACAACCTTCCTTCTGGCCTCAAGCAGTTTGCCGG
AGAAGTGGAAGAGCGCAGCAAGCAGGTATTGCAAAGCCAGTTGATGAAACTCGACCTGGTATCCCGGGAAGAATTTGAGG
TGCAGCAACATGTGCTGCTGCGTACCCGCGAAAAACTGGAAGCGTTGCAGACCAAGGTCGAAGCACTGGAAAAACTGTTG
GAAGACAAGCAGGCCTGA

Upstream 100 bases:

>100_bases
ACGCCTCCGTAAGGAGGCGTTTCATCATCTACAGAGGCACTTGGGCTTGGGCATTGGCTGGGGTACAATCGAGCCAATTC
AAACCAAGGCGGAATGACAG

Downstream 100 bases:

>100_bases
GCCTGTCATTAATTCTCACAGTTAAAAACGCCGGGCAATGCCTGGCGTTTTTCATTATCGACCAGCTTATCCCGGTAACA
CTGTGCCTATCAGGAACAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 85; Mature: 85

Protein sequence:

>85_residues
MLNPKKIEDLAKQLSDNLPSGLKQFAGEVEERSKQVLQSQLMKLDLVSREEFEVQQHVLLRTREKLEALQTKVEALEKLL
EDKQA

Sequences:

>Translated_85_residues
MLNPKKIEDLAKQLSDNLPSGLKQFAGEVEERSKQVLQSQLMKLDLVSREEFEVQQHVLLRTREKLEALQTKVEALEKLL
EDKQA
>Mature_85_residues
MLNPKKIEDLAKQLSDNLPSGLKQFAGEVEERSKQVLQSQLMKLDLVSREEFEVQQHVLLRTREKLEALQTKVEALEKLL
EDKQA

Specific function: Unknown

COG id: COG2960

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082201, Length=77, Percent_Identity=53.2467532467532, Blast_Score=88, Evalue=8e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007475 [H]

Pfam domain/function: PF04380 DUF526 [H]

EC number: NA

Molecular weight: Translated: 9830; Mature: 9830

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNPKKIEDLAKQLSDNLPSGLKQFAGEVEERSKQVLQSQLMKLDLVSREEFEVQQHVLL
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RTREKLEALQTKVEALEKLLEDKQA
HHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLNPKKIEDLAKQLSDNLPSGLKQFAGEVEERSKQVLQSQLMKLDLVSREEFEVQQHVLL
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RTREKLEALQTKVEALEKLLEDKQA
HHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 9868784 [H]